RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 SOGA3Q5TF21 947 aa7.92□□□□□ -1.14
USP39-219ENST00000496047 HHIPL2Q6UWX4 724 aa7.92□□□□□ -1.14
USP39-219ENST00000496047 OLFM4Q6UX06 510 aa7.92□□□□□ -1.14
USP39-219ENST00000496047 DRC7Q8IY82 874 aa7.92□□□□□ -1.14
USP39-219ENST00000496047 CCDC82Q8N4S0 544 aa7.92□□□□□ -1.14
USP39-219ENST00000496047 ANKS1AQ92625 1134 aa7.92□□□□□ -1.14
USP39-219ENST00000496047 GPR101Q96P66 508 aaPredicted RBP7.92□□□□□ -1.14
USP39-219ENST00000496047 FTOQ9C0B1 505 aaKnown RBP eCLIP7.92□□□□□ -1.14
USP39-219ENST00000496047 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.92□□□□□ -1.14
USP39-219ENST00000496047 SAP30BPQ9UHR5 308 aaKnown RBP7.92□□□□□ -1.14
USP39-219ENST00000496047 STX8Q9UNK0 236 aa7.92□□□□□ -1.14
USP39-219ENST00000496047 TTF2Q9UNY4 1162 aaKnown RBP7.92□□□□□ -1.14
USP39-219ENST00000496047 SNED1Q8TER0 1413 aa7.92□□□□□ -1.14
USP39-219ENST00000496047 A0A1B0GVL5 298 aa7.91□□□□□ -1.14
USP39-219ENST00000496047 WTIPA6NIX2 430 aaPredicted RBP7.91□□□□□ -1.14
USP39-219ENST00000496047 BTBD18B2RXH4 712 aa7.91□□□□□ -1.14
USP39-219ENST00000496047 ZNF202O95125 648 aa7.91□□□□□ -1.14
USP39-219ENST00000496047 PARP1P09874 1014 aaKnown RBP7.91□□□□□ -1.14
USP39-219ENST00000496047 CYP2D6P10635 497 aa7.91□□□□□ -1.14
USP39-219ENST00000496047 TOP1P11387 765 aaKnown RBP7.91□□□□□ -1.14
USP39-219ENST00000496047 PFKFB1P16118 471 aa7.91□□□□□ -1.14
USP39-219ENST00000496047 CDK8P49336 464 aa7.91□□□□□ -1.14
USP39-219ENST00000496047 HDLBPQ00341 1268 aaKnown RBP7.91□□□□□ -1.14
USP39-219ENST00000496047 PDE4DQ08499 809 aa7.91□□□□□ -1.14
USP39-219ENST00000496047 TROAPQ12815 778 aa7.91□□□□□ -1.14
USP39-219ENST00000496047 SLC15A2Q16348 729 aa7.91□□□□□ -1.14
USP39-219ENST00000496047 PFKFB3Q16875 520 aaPredicted RBP7.91□□□□□ -1.14
USP39-219ENST00000496047 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.91□□□□□ -1.14
USP39-219ENST00000496047 ELOA2Q8IYF1 753 aaPredicted RBP7.91□□□□□ -1.14
USP39-219ENST00000496047 FMR1NBQ8N0W7 255 aaPredicted RBP7.91□□□□□ -1.14
USP39-219ENST00000496047 CNNM3Q8NE01 707 aa7.91□□□□□ -1.14
USP39-219ENST00000496047 ENGASEQ8NFI3 743 aa7.91□□□□□ -1.14
USP39-219ENST00000496047 NEDD1Q8NHV4 660 aa7.91□□□□□ -1.14
USP39-219ENST00000496047 CCDC102AQ96A19 550 aa7.91□□□□□ -1.14
USP39-219ENST00000496047 FERMT2Q96AC1 680 aa7.91□□□□□ -1.14
USP39-219ENST00000496047 AIFM3Q96NN9 605 aa7.91□□□□□ -1.14
USP39-219ENST00000496047 PHF20Q9BVI0 1012 aa7.91□□□□□ -1.14
USP39-219ENST00000496047 GOLPH3LQ9H4A5 285 aa7.91□□□□□ -1.14
USP39-219ENST00000496047 TMOD2Q9NZR1 351 aa7.91□□□□□ -1.14
USP39-219ENST00000496047 VPS54Q9P1Q0 977 aa7.91□□□□□ -1.14
USP39-219ENST00000496047 MKRN1Q9UHC7 482 aaKnown RBP7.91□□□□□ -1.14
USP39-219ENST00000496047 KCNJ14Q9UNX9 436 aa7.91□□□□□ -1.14
USP39-219ENST00000496047 ZKSCAN5Q9Y2L8 839 aa7.91□□□□□ -1.14
USP39-219ENST00000496047 DAGLAQ9Y4D2 1042 aa7.91□□□□□ -1.14
USP39-219ENST00000496047 TACC3Q9Y6A5 838 aa7.91□□□□□ -1.14
USP39-219ENST00000496047 COL2A1P02458 1487 aaPredicted RBP7.9□□□□□ -1.14
USP39-219ENST00000496047 CCDC194A0A1B0GVG4 234 aa7.9□□□□□ -1.14
USP39-219ENST00000496047 MYO1BO43795 1136 aa7.9□□□□□ -1.14
USP39-219ENST00000496047 PLEKHA8P1O95397 391 aa7.9□□□□□ -1.14
USP39-219ENST00000496047 SMARCA1P28370 1054 aa7.9□□□□□ -1.14
USP39-219ENST00000496047 MARCKSP29966 332 aaPredicted RBP7.9□□□□□ -1.14
USP39-219ENST00000496047 GNA11P29992 359 aa7.9□□□□□ -1.14
USP39-219ENST00000496047 NDUFA8P51970 172 aa7.9□□□□□ -1.14
USP39-219ENST00000496047 PICALMQ13492 652 aa7.9□□□□□ -1.14
USP39-219ENST00000496047 SLC4A8Q2Y0W8 1093 aa7.9□□□□□ -1.14
USP39-219ENST00000496047 ASPRV1Q53RT3 343 aa7.9□□□□□ -1.14
USP39-219ENST00000496047 TTC38Q5R3I4 469 aa7.9□□□□□ -1.14
USP39-219ENST00000496047 C6orf132Q5T0Z8 1188 aa7.9□□□□□ -1.14
USP39-219ENST00000496047 STRIP1Q5VSL9 837 aa7.9□□□□□ -1.14
USP39-219ENST00000496047 RESP18Q5W5W9 173 aa7.9□□□□□ -1.14
USP39-219ENST00000496047 MSL1Q68DK7 614 aa7.9□□□□□ -1.14
USP39-219ENST00000496047 RRP36Q96EU6 259 aaKnown RBP7.9□□□□□ -1.14
USP39-219ENST00000496047 CCDC17Q96LX7 622 aa7.9□□□□□ -1.14
USP39-219ENST00000496047 SPZ1Q9BXG8 430 aa7.9□□□□□ -1.14
USP39-219ENST00000496047 TRIM5Q9C035 493 aa7.9□□□□□ -1.14
USP39-219ENST00000496047 FHDC1Q9C0D6 1143 aaPredicted RBP7.9□□□□□ -1.14
USP39-219ENST00000496047 DNAJC25Q9H1X3 360 aa7.9□□□□□ -1.14
USP39-219ENST00000496047 DHX36Q9H2U1 1008 aaKnown RBP7.9□□□□□ -1.14
USP39-219ENST00000496047 CBX8Q9HC52 389 aa7.9□□□□□ -1.14
USP39-219ENST00000496047 KIAA1468Q9P260 1216 aa7.9□□□□□ -1.14
USP39-219ENST00000496047 HDAC9Q9UKV0 1011 aa7.9□□□□□ -1.14
USP39-219ENST00000496047 V9GY48 417 aaPredicted RBP7.9□□□□□ -1.14
USP39-219ENST00000496047 MYH11P35749 1972 aa7.9□□□□□ -1.15
USP39-219ENST00000496047 DICER1Q9UPY3 1922 aaKnown RBP7.9□□□□□ -1.15
USP39-219ENST00000496047 FAM237AA0A1B0GTK4 181 aa7.89□□□□□ -1.15
USP39-219ENST00000496047 USP17L3A6NCW0 530 aa7.89□□□□□ -1.15
USP39-219ENST00000496047 USP17L4A6NCW7 530 aa7.89□□□□□ -1.15
USP39-219ENST00000496047 F8W031 263 aaPredicted RBP7.89□□□□□ -1.15
USP39-219ENST00000496047 LAD1O00515 517 aa7.89□□□□□ -1.15
USP39-219ENST00000496047 CBFA2T2O43439 604 aa7.89□□□□□ -1.15
USP39-219ENST00000496047 ECE2O60344 883 aa7.89□□□□□ -1.15
USP39-219ENST00000496047 SMC2O95347 1197 aa7.89□□□□□ -1.15
USP39-219ENST00000496047 RASA1P20936 1047 aa7.89□□□□□ -1.15
USP39-219ENST00000496047 PTPREP23469 700 aa7.89□□□□□ -1.15
USP39-219ENST00000496047 CDC25BP30305 580 aa7.89□□□□□ -1.15
USP39-219ENST00000496047 RBM5P52756 815 aaKnown RBP eCLIP7.89□□□□□ -1.15
USP39-219ENST00000496047 NLRP12P59046 1061 aa7.89□□□□□ -1.15
USP39-219ENST00000496047 ORC2Q13416 577 aaPredicted RBP7.89□□□□□ -1.15
USP39-219ENST00000496047 SNW1Q13573 536 aaKnown RBP7.89□□□□□ -1.15
USP39-219ENST00000496047 PTPAQ15257 358 aa7.89□□□□□ -1.15
USP39-219ENST00000496047 CCDC93Q567U6 631 aa7.89□□□□□ -1.15
USP39-219ENST00000496047 USP17L1Q7RTZ2 530 aa7.89□□□□□ -1.15
USP39-219ENST00000496047 BLIDQ8IZY5 108 aa7.89□□□□□ -1.15
USP39-219ENST00000496047 TRIML1Q8N9V2 468 aa7.89□□□□□ -1.15
USP39-219ENST00000496047 SLC16A10Q8TF71 515 aa7.89□□□□□ -1.15
USP39-219ENST00000496047 DYNLL2Q96FJ2 89 aa7.89□□□□□ -1.15
USP39-219ENST00000496047 BPIFA3Q9BQP9 254 aa7.89□□□□□ -1.15
USP39-219ENST00000496047 MRIQ9BWK5 157 aa7.89□□□□□ -1.15
USP39-219ENST00000496047 IRX2Q9BZI1 471 aaPredicted RBP7.89□□□□□ -1.15
USP39-219ENST00000496047 OSBPL5Q9H0X9 879 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms