RNA–Protein interactions for RNA: ENST00000495787.1

ECHDC3-204, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 3

Gene ECHDC3, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-204ENST00000495787 LRRC47Q8N1G4 583 aaKnown RBP12.38□□□□□ -0.43
ECHDC3-204ENST00000495787 SPATA32Q96LK8 384 aa12.38□□□□□ -0.43
ECHDC3-204ENST00000495787 TFIP11Q9UBB9 837 aaKnown RBP12.38□□□□□ -0.43
ECHDC3-204ENST00000495787 SYNPO2Q9UMS6 1093 aa12.38□□□□□ -0.43
ECHDC3-204ENST00000495787 MTMR7Q9Y216 660 aa12.38□□□□□ -0.43
ECHDC3-204ENST00000495787 ATAD5Q96QE3 1844 aa12.37□□□□□ -0.43
ECHDC3-204ENST00000495787 GPR25O00155 361 aa12.37□□□□□ -0.43
ECHDC3-204ENST00000495787 GH2P01242 217 aa12.37□□□□□ -0.43
ECHDC3-204ENST00000495787 GOLGA8HP0CJ92 632 aa12.37□□□□□ -0.43
ECHDC3-204ENST00000495787 TM4SF4P48230 202 aa12.37□□□□□ -0.43
ECHDC3-204ENST00000495787 UBE2HP62256 183 aa12.37□□□□□ -0.43
ECHDC3-204ENST00000495787 ATP2B2Q01814 1243 aa12.37□□□□□ -0.43
ECHDC3-204ENST00000495787 GNL2Q13823 731 aaKnown RBP12.37□□□□□ -0.43
ECHDC3-204ENST00000495787 SLC35G1Q2M3R5 365 aa12.37□□□□□ -0.43
ECHDC3-204ENST00000495787 MYSM1Q5VVJ2 828 aa12.37□□□□□ -0.43
ECHDC3-204ENST00000495787 APOBEC3FQ8IUX4 373 aaKnown RBP12.37□□□□□ -0.43
ECHDC3-204ENST00000495787 DCAF4Q8WV16 495 aa12.37□□□□□ -0.43
ECHDC3-204ENST00000495787 LEO1Q8WVC0 666 aaPredicted RBP12.37□□□□□ -0.43
ECHDC3-204ENST00000495787 TEPSINQ96N21 525 aa12.37□□□□□ -0.43
ECHDC3-204ENST00000495787 PHF20Q9BVI0 1012 aa12.37□□□□□ -0.43
ECHDC3-204ENST00000495787 FOXP1Q9H334 677 aaPredicted RBP12.37□□□□□ -0.43
ECHDC3-204ENST00000495787 SH3GLB2Q9NR46 395 aa12.37□□□□□ -0.43
ECHDC3-204ENST00000495787 KCNJ14Q9UNX9 436 aa12.37□□□□□ -0.43
ECHDC3-204ENST00000495787 hCG_1642624A0A1W2PR95 340 aa12.36□□□□□ -0.43
ECHDC3-204ENST00000495787 CYTH3O43739 400 aa12.36□□□□□ -0.43
ECHDC3-204ENST00000495787 GADD45BO75293 160 aaPredicted RBP12.36□□□□□ -0.43
ECHDC3-204ENST00000495787 JAG1P78504 1218 aa12.36□□□□□ -0.43
ECHDC3-204ENST00000495787 ZNF543Q08ER8 600 aa12.36□□□□□ -0.43
ECHDC3-204ENST00000495787 SHROOM1Q2M3G4 852 aaPredicted RBP12.36□□□□□ -0.43
ECHDC3-204ENST00000495787 GPATCH4Q5T3I0 446 aaKnown RBP12.36□□□□□ -0.43
ECHDC3-204ENST00000495787 SIAH1Q8IUQ4 282 aa12.36□□□□□ -0.43
ECHDC3-204ENST00000495787 CDAN1Q8IWY9 1227 aa12.36□□□□□ -0.43
ECHDC3-204ENST00000495787 DIS3L2Q8IYB7 885 aaKnown RBP12.36□□□□□ -0.43
ECHDC3-204ENST00000495787 GPT2Q8TD30 523 aa12.36□□□□□ -0.43
ECHDC3-204ENST00000495787 USP28Q96RU2 1077 aa12.36□□□□□ -0.43
ECHDC3-204ENST00000495787 RIOX1Q9H6W3 641 aa12.36□□□□□ -0.43
ECHDC3-204ENST00000495787 BRMS1Q9HCU9 246 aa12.36□□□□□ -0.43
ECHDC3-204ENST00000495787 RTEL1Q9NZ71 1219 aa12.36□□□□□ -0.43
ECHDC3-204ENST00000495787 VPS54Q9P1Q0 977 aa12.36□□□□□ -0.43
ECHDC3-204ENST00000495787 RCOR1Q9UKL0 485 aa12.36□□□□□ -0.43
ECHDC3-204ENST00000495787 BTBD18B2RXH4 712 aa12.35□□□□□ -0.43
ECHDC3-204ENST00000495787 KRT2P35908 639 aa12.35□□□□□ -0.43
ECHDC3-204ENST00000495787 CAP2P40123 477 aa12.35□□□□□ -0.43
ECHDC3-204ENST00000495787 SREBF2Q12772 1141 aa12.35□□□□□ -0.43
ECHDC3-204ENST00000495787 TTLL12Q14166 644 aaPredicted RBP12.35□□□□□ -0.43
ECHDC3-204ENST00000495787 SLFN13Q68D06 897 aa12.35□□□□□ -0.43
ECHDC3-204ENST00000495787 MOB2Q70IA6 237 aa12.35□□□□□ -0.43
ECHDC3-204ENST00000495787 MIGA2Q7L4E1 593 aa12.35□□□□□ -0.43
ECHDC3-204ENST00000495787 RASGRP2Q7LDG7 609 aa12.35□□□□□ -0.43
ECHDC3-204ENST00000495787 NOSTRINQ8IVI9 506 aa12.35□□□□□ -0.43
ECHDC3-204ENST00000495787 GMCL1P1Q8NEA9 526 aa12.35□□□□□ -0.43
ECHDC3-204ENST00000495787 SHISA4Q96DD7 197 aa12.35□□□□□ -0.43
ECHDC3-204ENST00000495787 HOOK2Q96ED9 719 aa12.35□□□□□ -0.43
ECHDC3-204ENST00000495787 RRP36Q96EU6 259 aaKnown RBP12.35□□□□□ -0.43
ECHDC3-204ENST00000495787 CFHR5Q9BXR6 569 aa12.35□□□□□ -0.43
ECHDC3-204ENST00000495787 DEFB129Q9H1M3 183 aa12.35□□□□□ -0.43
ECHDC3-204ENST00000495787 ARHGEF10LQ9HCE6 1279 aa12.35□□□□□ -0.43
ECHDC3-204ENST00000495787 GINM1Q9NU53 330 aa12.35□□□□□ -0.43
ECHDC3-204ENST00000495787 POLR3EQ9NVU0 708 aa12.35□□□□□ -0.43
ECHDC3-204ENST00000495787 ZBTB21Q9ULJ3 1066 aa12.35□□□□□ -0.43
ECHDC3-204ENST00000495787 PPP2R3BQ9Y5P8 575 aa12.35□□□□□ -0.43
ECHDC3-204ENST00000495787 FRMPD2Q68DX3 1309 aaPredicted RBP12.35□□□□□ -0.43
ECHDC3-204ENST00000495787 hCG_1984214I3L0E3 225 aa12.34□□□□□ -0.43
ECHDC3-204ENST00000495787 FKTNO75072 461 aa12.34□□□□□ -0.43
ECHDC3-204ENST00000495787 YEATS4O95619 227 aa12.34□□□□□ -0.43
ECHDC3-204ENST00000495787 CALML3P27482 149 aa12.34□□□□□ -0.43
ECHDC3-204ENST00000495787 NF2P35240 595 aa12.34□□□□□ -0.43
ECHDC3-204ENST00000495787 NASPP49321 788 aaPredicted RBP12.34□□□□□ -0.43
ECHDC3-204ENST00000495787 NLRP5P59047 1200 aa12.34□□□□□ -0.43
ECHDC3-204ENST00000495787 CCDC96Q2M329 555 aa12.34□□□□□ -0.43
ECHDC3-204ENST00000495787 HABP4Q5JVS0 413 aaKnown RBP12.34□□□□□ -0.43
ECHDC3-204ENST00000495787 DCAF15Q66K64 600 aa12.34□□□□□ -0.43
ECHDC3-204ENST00000495787 ZNF713Q8N859 430 aaPredicted RBP12.34□□□□□ -0.43
ECHDC3-204ENST00000495787 CCDC148Q8NFR7 591 aa12.34□□□□□ -0.43
ECHDC3-204ENST00000495787 PIBF1Q8WXW3 757 aa12.34□□□□□ -0.43
ECHDC3-204ENST00000495787 GPCPD1Q9NPB8 672 aa12.34□□□□□ -0.43
ECHDC3-204ENST00000495787 SEC63Q9UGP8 760 aaKnown RBP12.34□□□□□ -0.43
ECHDC3-204ENST00000495787 PHF20L1A8MW92 1017 aa12.33□□□□□ -0.44
ECHDC3-204ENST00000495787 F5H6K3 240 aa12.33□□□□□ -0.44
ECHDC3-204ENST00000495787 ASNSP08243 561 aa12.33□□□□□ -0.44
ECHDC3-204ENST00000495787 SLC1A4P43007 532 aa12.33□□□□□ -0.44
ECHDC3-204ENST00000495787 CEBPZQ03701 1054 aaKnown RBP12.33□□□□□ -0.44
ECHDC3-204ENST00000495787 KLRC3Q07444 240 aa12.33□□□□□ -0.44
ECHDC3-204ENST00000495787 NPY5RQ15761 445 aa12.33□□□□□ -0.44
ECHDC3-204ENST00000495787 ANO1Q5XXA6 986 aa12.33□□□□□ -0.44
ECHDC3-204ENST00000495787 WWC2Q6AWC2 1192 aa12.33□□□□□ -0.44
ECHDC3-204ENST00000495787 GALNT17Q6IS24 598 aa12.33□□□□□ -0.44
ECHDC3-204ENST00000495787 DAGLBQ8NCG7 672 aa12.33□□□□□ -0.44
ECHDC3-204ENST00000495787 OXER1Q8TDS5 423 aa12.33□□□□□ -0.44
ECHDC3-204ENST00000495787 CCDC12Q8WUD4 166 aaPredicted RBP12.33□□□□□ -0.44
ECHDC3-204ENST00000495787 GMCL1Q96IK5 515 aa12.33□□□□□ -0.44
ECHDC3-204ENST00000495787 PIGSQ96S52 555 aa12.33□□□□□ -0.44
ECHDC3-204ENST00000495787 UBA5Q9GZZ9 404 aa12.33□□□□□ -0.44
ECHDC3-204ENST00000495787 CPVLQ9H3G5 476 aa12.33□□□□□ -0.44
ECHDC3-204ENST00000495787 BARHL2Q9NY43 387 aa12.33□□□□□ -0.44
ECHDC3-204ENST00000495787 SCAF8Q9UPN6 1271 aaKnown RBP12.33□□□□□ -0.44
ECHDC3-204ENST00000495787 TMX2Q9Y320 296 aa12.33□□□□□ -0.44
ECHDC3-204ENST00000495787 DOCK1Q14185 1865 aa12.32□□□□□ -0.44
ECHDC3-204ENST00000495787 GOLGA6L4A6NEF3 574 aa12.32□□□□□ -0.44
ECHDC3-204ENST00000495787 STXBP3O00186 592 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms