RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 C19orf81C9J6K1 198 aa18.14■□□□□ 0.49
PHF1-211ENST00000495509 ZSCAN22P10073 491 aaPredicted RBP18.14■□□□□ 0.49
PHF1-211ENST00000495509 SCG2P13521 617 aa18.14■□□□□ 0.49
PHF1-211ENST00000495509 GJA5P36382 358 aa18.14■□□□□ 0.49
PHF1-211ENST00000495509 USP14P54578 494 aa18.14■□□□□ 0.49
PHF1-211ENST00000495509 FKBP1BP68106 108 aa18.14■□□□□ 0.49
PHF1-211ENST00000495509 BTNL9Q6UXG8 535 aa18.14■□□□□ 0.49
PHF1-211ENST00000495509 FERMT3Q86UX7 667 aa18.14■□□□□ 0.49
PHF1-211ENST00000495509 WASF1Q92558 559 aa18.14■□□□□ 0.49
PHF1-211ENST00000495509 LPAR1Q92633 364 aa18.14■□□□□ 0.49
PHF1-211ENST00000495509 GPKOWQ92917 476 aaPredicted RBP eCLIP18.14■□□□□ 0.495e-9■■■■□ 21.7
PHF1-211ENST00000495509 RRP36Q96EU6 259 aaKnown RBP18.14■□□□□ 0.49
PHF1-211ENST00000495509 VPS54Q9P1Q0 977 aa18.14■□□□□ 0.49
PHF1-211ENST00000495509 KCNJ14Q9UNX9 436 aa18.14■□□□□ 0.49
PHF1-211ENST00000495509 WDR33Q9C0J8 1336 aaKnown RBP18.13■□□□□ 0.49
PHF1-211ENST00000495509 SYDE2Q5VT97 1194 aa18.13■□□□□ 0.49
PHF1-211ENST00000495509 KRT40Q6A162 431 aa18.13■□□□□ 0.49
PHF1-211ENST00000495509 SAMD1Q6SPF0 538 aaPredicted RBP18.13■□□□□ 0.49
PHF1-211ENST00000495509 CHAMP1Q96JM3 812 aa18.13■□□□□ 0.49
PHF1-211ENST00000495509 RPAP3Q9H6T3 665 aaPredicted RBP18.13■□□□□ 0.49
PHF1-211ENST00000495509 SMCHD1A6NHR9 2005 aa18.13■□□□□ 0.49
PHF1-211ENST00000495509 WDR46O15213 610 aaKnown RBP18.12■□□□□ 0.49
PHF1-211ENST00000495509 STAT2P52630 851 aa18.12■□□□□ 0.49
PHF1-211ENST00000495509 SH3D19Q5HYK7 790 aa18.12■□□□□ 0.49
PHF1-211ENST00000495509 TNPO1Q92973 898 aaKnown RBP18.12■□□□□ 0.49
PHF1-211ENST00000495509 MTMR8Q96EF0 704 aa18.12■□□□□ 0.49
PHF1-211ENST00000495509 PRR12Q9ULL5 1215 aa18.12■□□□□ 0.49
PHF1-211ENST00000495509 PASKQ96RG2 1323 aa18.12■□□□□ 0.49
PHF1-211ENST00000495509 PPP1R11O60927 126 aaPredicted RBP18.12■□□□□ 0.49
PHF1-211ENST00000495509 YY1P25490 414 aa18.12■□□□□ 0.49
PHF1-211ENST00000495509 WWC2Q6AWC2 1192 aa18.12■□□□□ 0.49
PHF1-211ENST00000495509 TYW1BQ6NUM6 668 aa18.12■□□□□ 0.49
PHF1-211ENST00000495509 RBM46Q8TBY0 533 aaKnown RBP18.12■□□□□ 0.49
PHF1-211ENST00000495509 KIFC2Q96AC6 838 aa18.12■□□□□ 0.49
PHF1-211ENST00000495509 C12orf42Q96LP6 360 aa18.12■□□□□ 0.49
PHF1-211ENST00000495509 FEM1BQ9UK73 627 aa18.12■□□□□ 0.49
PHF1-211ENST00000495509 PNMA6FA0A0J9YX94 578 aa18.11■□□□□ 0.49
PHF1-211ENST00000495509 PPIL2Q13356 520 aa18.11■□□□□ 0.49
PHF1-211ENST00000495509 FOXD4L6Q3SYB3 417 aaPredicted RBP18.11■□□□□ 0.49
PHF1-211ENST00000495509 FOXD4L3Q6VB84 417 aaPredicted RBP18.11■□□□□ 0.49
PHF1-211ENST00000495509 HEATR3Q7Z4Q2 680 aa18.11■□□□□ 0.49
PHF1-211ENST00000495509 CHURC1Q8WUH1 139 aa18.11■□□□□ 0.49
PHF1-211ENST00000495509 COA7Q96BR5 231 aa18.11■□□□□ 0.49
PHF1-211ENST00000495509 TANGO6Q9C0B7 1094 aa18.11■□□□□ 0.49
PHF1-211ENST00000495509 TMOD4Q9NZQ9 345 aa18.11■□□□□ 0.49
PHF1-211ENST00000495509 RBM27Q9P2N5 1060 aaKnown RBP18.11■□□□□ 0.49
PHF1-211ENST00000495509 SEC63Q9UGP8 760 aaKnown RBP18.11■□□□□ 0.49
PHF1-211ENST00000495509 UNCXA6NJT0 531 aa18.1■□□□□ 0.49
PHF1-211ENST00000495509 ZBTB5O15062 677 aa18.1■□□□□ 0.49
PHF1-211ENST00000495509 ADAMTS3O15072 1205 aa18.1■□□□□ 0.49
PHF1-211ENST00000495509 F13A1P00488 732 aa18.1■□□□□ 0.49
PHF1-211ENST00000495509 QRICH1Q2TAL8 776 aa18.1■□□□□ 0.49
PHF1-211ENST00000495509 MCTP1Q6DN14 999 aa18.1■□□□□ 0.49
PHF1-211ENST00000495509 ZNF784Q8NCA9 323 aaPredicted RBP18.1■□□□□ 0.49
PHF1-211ENST00000495509 SMC1BQ8NDV3 1235 aa18.1■□□□□ 0.49
PHF1-211ENST00000495509 KCNH4Q9UQ05 1017 aa18.1■□□□□ 0.49
PHF1-211ENST00000495509 A0A0G2JLL6 359 aaPredicted RBP18.09■□□□□ 0.49
PHF1-211ENST00000495509 STXBP3O00186 592 aa18.09■□□□□ 0.49
PHF1-211ENST00000495509 CXCL11O14625 94 aa18.09■□□□□ 0.49
PHF1-211ENST00000495509 PLA2G6O60733 806 aa18.09■□□□□ 0.49
PHF1-211ENST00000495509 MKRN3Q13064 507 aaKnown RBP18.09■□□□□ 0.49
PHF1-211ENST00000495509 TRIM29Q14134 588 aa18.09■□□□□ 0.49
PHF1-211ENST00000495509 CDC37Q16543 378 aaPredicted RBP18.09■□□□□ 0.49
PHF1-211ENST00000495509 TREML2Q5T2D2 321 aa18.09■□□□□ 0.49
PHF1-211ENST00000495509 PRRT2Q7Z6L0 340 aaPredicted RBP18.09■□□□□ 0.49
PHF1-211ENST00000495509 BARHL2Q9NY43 387 aa18.09■□□□□ 0.49
PHF1-211ENST00000495509 KIF28PB7ZC32 967 aa18.09■□□□□ 0.49
PHF1-211ENST00000495509 FLOT1O75955 427 aa18.09■□□□□ 0.49
PHF1-211ENST00000495509 TOMM70O94826 608 aa18.09■□□□□ 0.49
PHF1-211ENST00000495509 TAL1P17542 331 aaPredicted RBP18.09■□□□□ 0.49
PHF1-211ENST00000495509 HUNKP57058 714 aa18.09■□□□□ 0.49
PHF1-211ENST00000495509 FAM173BQ6P4H8 233 aa18.09■□□□□ 0.49
PHF1-211ENST00000495509 GADL1Q6ZQY3 521 aa18.09■□□□□ 0.49
PHF1-211ENST00000495509 FAM160B2Q86V87 743 aa18.09■□□□□ 0.49
PHF1-211ENST00000495509 OXER1Q8TDS5 423 aa18.09■□□□□ 0.49
PHF1-211ENST00000495509 PHF20Q9BVI0 1012 aa18.09■□□□□ 0.49
PHF1-211ENST00000495509 MMP1P03956 469 aa18.08■□□□□ 0.48
PHF1-211ENST00000495509 PDIA4P13667 645 aaKnown RBP18.08■□□□□ 0.48
PHF1-211ENST00000495509 RESTQ13127 1097 aa18.08■□□□□ 0.48
PHF1-211ENST00000495509 MOGSQ13724 837 aa18.08■□□□□ 0.48
PHF1-211ENST00000495509 NPY5RQ15761 445 aa18.08■□□□□ 0.48
PHF1-211ENST00000495509 PRPF38AQ8NAV1 312 aaKnown RBP18.08■□□□□ 0.48
PHF1-211ENST00000495509 WNK4Q96J92 1243 aa18.08■□□□□ 0.48
PHF1-211ENST00000495509 SLF1Q9BQI6 1058 aa18.08■□□□□ 0.48
PHF1-211ENST00000495509 TCHHQ07283 1943 aa18.08■□□□□ 0.48
PHF1-211ENST00000495509 RLFQ13129 1914 aa18.08■□□□□ 0.48
PHF1-211ENST00000495509 BTBD18B2RXH4 712 aa18.07■□□□□ 0.48
PHF1-211ENST00000495509 XBP1P17861 261 aa18.07■□□□□ 0.48
PHF1-211ENST00000495509 NLRP5P59047 1200 aa18.07■□□□□ 0.48
PHF1-211ENST00000495509 CATSPERGQ6ZRH7 1159 aa18.07■□□□□ 0.48
PHF1-211ENST00000495509 PARP14Q460N5 1801 aa18.07■□□□□ 0.48
PHF1-211ENST00000495509 NAPAP54920 295 aa18.07■□□□□ 0.48
PHF1-211ENST00000495509 KIF23Q02241 960 aaPredicted RBP18.07■□□□□ 0.48
PHF1-211ENST00000495509 CCDC174Q6PII3 467 aa18.07■□□□□ 0.48
PHF1-211ENST00000495509 SAPCD2Q86UD0 394 aa18.07■□□□□ 0.48
PHF1-211ENST00000495509 SH3GLB2Q9NR46 395 aa18.07■□□□□ 0.48
PHF1-211ENST00000495509 PPP1R9AQ9ULJ8 1098 aa18.07■□□□□ 0.48
PHF1-211ENST00000495509 USP17L15C9J2P7 530 aa18.06■□□□□ 0.48
PHF1-211ENST00000495509 USP17L13C9JLJ4 530 aa18.06■□□□□ 0.48
PHF1-211ENST00000495509 USP17L11C9JVI0 530 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms