RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 TLR3O15455 904 aaKnown RBP7.05□□□□□ -1.28
SMC4-224ENST00000494612 GALK1P51570 392 aa7.05□□□□□ -1.28
SMC4-224ENST00000494612 KRTAP10-2P60368 255 aa7.05□□□□□ -1.28
SMC4-224ENST00000494612 NFKB2Q00653 900 aa7.05□□□□□ -1.28
SMC4-224ENST00000494612 PAK2Q13177 524 aa7.05□□□□□ -1.28
SMC4-224ENST00000494612 PWP1Q13610 501 aa7.05□□□□□ -1.28
SMC4-224ENST00000494612 MPP2Q14168 576 aa7.05□□□□□ -1.28
SMC4-224ENST00000494612 CLEC16AQ2KHT3 1053 aa7.05□□□□□ -1.28
SMC4-224ENST00000494612 SNAP47Q5SQN1 464 aa7.05□□□□□ -1.28
SMC4-224ENST00000494612 FBXL19Q6PCT2 694 aa7.05□□□□□ -1.28
SMC4-224ENST00000494612 RNF111Q6ZNA4 994 aa7.05□□□□□ -1.28
SMC4-224ENST00000494612 REC114Q7Z4M0 266 aa7.05□□□□□ -1.28
SMC4-224ENST00000494612 FBXO27Q8NI29 283 aa7.05□□□□□ -1.28
SMC4-224ENST00000494612 SYTL5Q8TDW5 730 aaPredicted RBP7.05□□□□□ -1.28
SMC4-224ENST00000494612 HDAC8Q9BY41 377 aa7.05□□□□□ -1.28
SMC4-224ENST00000494612 XYLT2Q9H1B5 865 aa7.05□□□□□ -1.28
SMC4-224ENST00000494612 SLC22A31A6NKX4 558 aa7.04□□□□□ -1.28
SMC4-224ENST00000494612 UBOX5O94941 541 aa7.04□□□□□ -1.28
SMC4-224ENST00000494612 NMIQ13287 307 aaPredicted RBP7.04□□□□□ -1.28
SMC4-224ENST00000494612 FAM196AQ6ZSG2 479 aa7.04□□□□□ -1.28
SMC4-224ENST00000494612 PHACTR4Q8IZ21 702 aa7.04□□□□□ -1.28
SMC4-224ENST00000494612 DAGLBQ8NCG7 672 aa7.04□□□□□ -1.28
SMC4-224ENST00000494612 USP35Q9P2H5 1018 aa7.04□□□□□ -1.28
SMC4-224ENST00000494612 OTOL1A6NHN0 477 aaPredicted RBP7.03□□□□□ -1.28
SMC4-224ENST00000494612 KIAA0825Q8IV33 1275 aa7.03□□□□□ -1.28
SMC4-224ENST00000494612 EAF1Q96JC9 268 aaPredicted RBP7.03□□□□□ -1.28
SMC4-224ENST00000494612 UBP1Q9NZI7 540 aa7.03□□□□□ -1.28
SMC4-224ENST00000494612 TMEM82A0PJX8 343 aa7.02□□□□□ -1.29
SMC4-224ENST00000494612 HRKO00198 91 aa7.02□□□□□ -1.29
SMC4-224ENST00000494612 NRDCO43847 1150 aa7.02□□□□□ -1.29
SMC4-224ENST00000494612 DNAJA1P31689 397 aaKnown RBP7.02□□□□□ -1.29
SMC4-224ENST00000494612 GBP1P32455 592 aa7.02□□□□□ -1.29
SMC4-224ENST00000494612 KIR2DL1P43626 348 aaPredicted RBP7.02□□□□□ -1.29
SMC4-224ENST00000494612 KIR2DL2P43627 348 aaPredicted RBP7.02□□□□□ -1.29
SMC4-224ENST00000494612 SSPNQ14714 243 aa7.02□□□□□ -1.29
SMC4-224ENST00000494612 ZXDCQ2QGD7 858 aaPredicted RBP7.02□□□□□ -1.29
SMC4-224ENST00000494612 ZNF655Q8N720 491 aaPredicted RBP7.02□□□□□ -1.29
SMC4-224ENST00000494612 TCTN2Q96GX1 697 aa7.02□□□□□ -1.29
SMC4-224ENST00000494612 CRTAC1Q9NQ79 661 aa7.02□□□□□ -1.29
SMC4-224ENST00000494612 KCNQ5Q9NR82 932 aa7.02□□□□□ -1.29
SMC4-224ENST00000494612 IRAK3Q9Y616 596 aa7.02□□□□□ -1.29
SMC4-224ENST00000494612 OR14I1A6ND48 311 aa7.01□□□□□ -1.29
SMC4-224ENST00000494612 ATE1O95260 518 aa7.01□□□□□ -1.29
SMC4-224ENST00000494612 PI3P19957 117 aa7.01□□□□□ -1.29
SMC4-224ENST00000494612 RPL10P27635 214 aaKnown RBP7.01□□□□□ -1.29
SMC4-224ENST00000494612 NBPF9Q3BBW0 867 aa7.01□□□□□ -1.29
SMC4-224ENST00000494612 NBPF12Q5TAG4 269 aaPredicted RBP7.01□□□□□ -1.29
SMC4-224ENST00000494612 SIRT2Q8IXJ6 389 aa7.01□□□□□ -1.29
SMC4-224ENST00000494612 LINC00116Q8NCU8 138 aa7.01□□□□□ -1.29
SMC4-224ENST00000494612 MAP6Q96JE9 813 aa7.01□□□□□ -1.29
SMC4-224ENST00000494612 TINF2Q9BSI4 451 aa7.01□□□□□ -1.29
SMC4-224ENST00000494612 LRRC3Q9BY71 257 aa7.01□□□□□ -1.29
SMC4-224ENST00000494612 FOXP3Q9BZS1 431 aa7.01□□□□□ -1.29
SMC4-224ENST00000494612 ASCC2Q9H1I8 757 aaPredicted RBP7.01□□□□□ -1.29
SMC4-224ENST00000494612 MBD1Q9UIS9 605 aaPredicted RBP7.01□□□□□ -1.29
SMC4-224ENST00000494612 SUPT16HQ9Y5B9 1047 aaKnown RBP7.01□□□□□ -1.29
SMC4-224ENST00000494612 ROBO2Q9HCK4 1378 aa7□□□□□ -1.29
SMC4-224ENST00000494612 GREM1O60565 184 aa7□□□□□ -1.29
SMC4-224ENST00000494612 USP2O75604 605 aaPredicted RBP7□□□□□ -1.29
SMC4-224ENST00000494612 CRKP46108 304 aa7□□□□□ -1.29
SMC4-224ENST00000494612 AFF3P51826 1226 aaKnown RBP7□□□□□ -1.29
SMC4-224ENST00000494612 YBX1P67809 324 aaKnown RBP7□□□□□ -1.29
SMC4-224ENST00000494612 GNL2Q13823 731 aaKnown RBP7□□□□□ -1.29
SMC4-224ENST00000494612 SEZ6Q53EL9 994 aa7□□□□□ -1.29
SMC4-224ENST00000494612 ARSHQ5FYA8 562 aa7□□□□□ -1.29
SMC4-224ENST00000494612 WAPLQ7Z5K2 1190 aa7□□□□□ -1.29
SMC4-224ENST00000494612 TMC3Q7Z5M5 1100 aa7□□□□□ -1.29
SMC4-224ENST00000494612 HHIPL1Q96JK4 782 aa7□□□□□ -1.29
SMC4-224ENST00000494612 SIGLEC10Q96LC7 697 aa7□□□□□ -1.29
SMC4-224ENST00000494612 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7□□□□□ -1.29
SMC4-224ENST00000494612 TCFL5Q9UL49 500 aa7□□□□□ -1.29
SMC4-224ENST00000494612 MCM4P33991 863 aa6.99□□□□□ -1.29
SMC4-224ENST00000494612 RNF4P78317 190 aa6.99□□□□□ -1.29
SMC4-224ENST00000494612 SRSF3P84103 164 aaKnown RBP6.99□□□□□ -1.29
SMC4-224ENST00000494612 APOBRQ0VD83 1088 aa6.99□□□□□ -1.29
SMC4-224ENST00000494612 SNW1Q13573 536 aaKnown RBP6.99□□□□□ -1.29
SMC4-224ENST00000494612 BBS9Q3SYG4 887 aa6.99□□□□□ -1.29
SMC4-224ENST00000494612 ADGRF1Q5T601 910 aa6.99□□□□□ -1.29
SMC4-224ENST00000494612 CDCP2Q5VXM1 449 aa6.99□□□□□ -1.29
SMC4-224ENST00000494612 FEZF2Q8TBJ5 459 aa6.99□□□□□ -1.29
SMC4-224ENST00000494612 PANK1Q8TE04 598 aa6.99□□□□□ -1.29
SMC4-224ENST00000494612 NKD1Q969G9 470 aa6.99□□□□□ -1.29
SMC4-224ENST00000494612 GPRASP2Q96D09 838 aa6.99□□□□□ -1.29
SMC4-224ENST00000494612 C8orf37Q96NL8 207 aa6.99□□□□□ -1.29
SMC4-224ENST00000494612 BRMS1Q9HCU9 246 aa6.99□□□□□ -1.29
SMC4-224ENST00000494612 GMIPQ9P107 970 aa6.99□□□□□ -1.29
SMC4-224ENST00000494612 ZMYM5Q9UJ78 669 aa6.99□□□□□ -1.29
SMC4-224ENST00000494612 IGSF3O75054 1194 aa6.98□□□□□ -1.29
SMC4-224ENST00000494612 PNLIPP16233 465 aa6.98□□□□□ -1.29
SMC4-224ENST00000494612 PCBP3P57721 371 aaKnown RBP6.98□□□□□ -1.29
SMC4-224ENST00000494612 MLECQ14165 292 aa6.98□□□□□ -1.29
SMC4-224ENST00000494612 SLC14A2Q15849 920 aa6.98□□□□□ -1.29
SMC4-224ENST00000494612 SPATS1Q496A3 300 aa6.98□□□□□ -1.29
SMC4-224ENST00000494612 SP8Q8IXZ3 490 aa6.98□□□□□ -1.29
SMC4-224ENST00000494612 ZDHHC14Q8IZN3 488 aa6.98□□□□□ -1.29
SMC4-224ENST00000494612 DACT3Q96B18 629 aaPredicted RBP6.98□□□□□ -1.29
SMC4-224ENST00000494612 TANGO6Q9C0B7 1094 aa6.98□□□□□ -1.29
SMC4-224ENST00000494612 CNTD2Q9H8S5 307 aa6.98□□□□□ -1.29
SMC4-224ENST00000494612 EHMT1Q9H9B1 1298 aa6.98□□□□□ -1.29
SMC4-224ENST00000494612 EPB41L4AQ9HCS5 686 aaPredicted RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms