RNA–Protein interactions for RNA: ENST00000494557.1

RAF1-212, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 1 (best)

Gene RAF1, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-212ENST00000494557 CEBPZQ03701 1054 aaKnown RBP9.67□□□□□ -0.86
RAF1-212ENST00000494557 USP49Q70CQ1 688 aa9.67□□□□□ -0.86
RAF1-212ENST00000494557 SMARCE1Q969G3 411 aa9.67□□□□□ -0.86
RAF1-212ENST00000494557 MKL1Q969V6 931 aa9.67□□□□□ -0.86
RAF1-212ENST00000494557 THAP9Q9H5L6 903 aa9.67□□□□□ -0.86
RAF1-212ENST00000494557 POLR2DO15514 142 aaKnown RBP9.67□□□□□ -0.86
RAF1-212ENST00000494557 SMC2O95347 1197 aa9.67□□□□□ -0.86
RAF1-212ENST00000494557 DMTNQ08495 405 aa9.67□□□□□ -0.86
RAF1-212ENST00000494557 MOXD1Q6UVY6 613 aa9.67□□□□□ -0.86
RAF1-212ENST00000494557 NFXL1Q6ZNB6 911 aa9.67□□□□□ -0.86
RAF1-212ENST00000494557 ZNF804AQ7Z570 1209 aa9.67□□□□□ -0.86
RAF1-212ENST00000494557 BLIDQ8IZY5 108 aa9.67□□□□□ -0.86
RAF1-212ENST00000494557 PRDM10Q9NQV6 1147 aa9.67□□□□□ -0.86
RAF1-212ENST00000494557 DISC1Q9NRI5 854 aa9.67□□□□□ -0.86
RAF1-212ENST00000494557 BCCIPQ9P287 314 aaKnown RBP eCLIP9.67□□□□□ -0.86
RAF1-212ENST00000494557 ATF5Q9Y2D1 282 aaPredicted RBP9.67□□□□□ -0.86
RAF1-212ENST00000494557 CYP3A7-CYP3A51PA0A087WV96 503 aa9.66□□□□□ -0.86
RAF1-212ENST00000494557 CYP3A7P24462 503 aa9.66□□□□□ -0.86
RAF1-212ENST00000494557 MARSP56192 900 aaKnown RBP9.66□□□□□ -0.86
RAF1-212ENST00000494557 HDLBPQ00341 1268 aaKnown RBP9.66□□□□□ -0.86
RAF1-212ENST00000494557 ECM1Q16610 540 aa9.66□□□□□ -0.86
RAF1-212ENST00000494557 CCDC148Q8NFR7 591 aa9.66□□□□□ -0.86
RAF1-212ENST00000494557 NOC3LQ8WTT2 800 aaKnown RBP9.66□□□□□ -0.86
RAF1-212ENST00000494557 DEFB129Q9H1M3 183 aa9.66□□□□□ -0.86
RAF1-212ENST00000494557 RAI14Q9P0K7 980 aa9.66□□□□□ -0.86
RAF1-212ENST00000494557 ZNFX1Q9P2E3 1918 aaKnown RBP9.66□□□□□ -0.86
RAF1-212ENST00000494557 ZSWIM8A7E2V4 1837 aa9.66□□□□□ -0.86
RAF1-212ENST00000494557 FRMD3A2A2Y4 597 aa9.66□□□□□ -0.86
RAF1-212ENST00000494557 TADA3O75528 432 aa9.66□□□□□ -0.86
RAF1-212ENST00000494557 ZSCAN20P17040 1043 aaPredicted RBP9.66□□□□□ -0.86
RAF1-212ENST00000494557 SFPQP23246 707 aaKnown RBP eCLIP9.66□□□□□ -0.86
RAF1-212ENST00000494557 USP5P45974 858 aa9.66□□□□□ -0.86
RAF1-212ENST00000494557 UBASH3AP57075 661 aa9.66□□□□□ -0.86
RAF1-212ENST00000494557 TMEM119Q4V9L6 283 aa9.66□□□□□ -0.86
RAF1-212ENST00000494557 WWC2Q6AWC2 1192 aa9.66□□□□□ -0.86
RAF1-212ENST00000494557 SRP68Q9UHB9 627 aaKnown RBP9.66□□□□□ -0.86
RAF1-212ENST00000494557 MRFAP1Q9Y605 127 aa9.66□□□□□ -0.86
RAF1-212ENST00000494557 SYNRGQ9UMZ2 1314 aa9.66□□□□□ -0.86
RAF1-212ENST00000494557 MFAP3LO75121 409 aa9.65□□□□□ -0.86
RAF1-212ENST00000494557 APPP05067 770 aa9.65□□□□□ -0.86
RAF1-212ENST00000494557 GPSM2P81274 684 aa9.65□□□□□ -0.86
RAF1-212ENST00000494557 PTPN14Q15678 1187 aa9.65□□□□□ -0.86
RAF1-212ENST00000494557 PPP4R3AQ6IN85 833 aa9.65□□□□□ -0.86
RAF1-212ENST00000494557 HHIPL2Q6UWX4 724 aa9.65□□□□□ -0.86
RAF1-212ENST00000494557 SH3RF3Q8TEJ3 882 aaPredicted RBP9.65□□□□□ -0.86
RAF1-212ENST00000494557 CD209Q9NNX6 404 aa9.65□□□□□ -0.86
RAF1-212ENST00000494557 CABP5Q9NP86 173 aa9.65□□□□□ -0.86
RAF1-212ENST00000494557 RMND1Q9NWS8 449 aa9.65□□□□□ -0.86
RAF1-212ENST00000494557 VPS54Q9P1Q0 977 aa9.65□□□□□ -0.86
RAF1-212ENST00000494557 SWAP70Q9UH65 585 aa9.65□□□□□ -0.86
RAF1-212ENST00000494557 CCNL1Q9UK58 526 aaPredicted RBP9.65□□□□□ -0.86
RAF1-212ENST00000494557 NAP1L2Q9ULW6 460 aaPredicted RBP9.65□□□□□ -0.86
RAF1-212ENST00000494557 TMEM232C9JQI7 657 aa9.65□□□□□ -0.86
RAF1-212ENST00000494557 LDHCP07864 332 aa9.65□□□□□ -0.86
RAF1-212ENST00000494557 EEF1GP26641 437 aaKnown RBP9.65□□□□□ -0.86
RAF1-212ENST00000494557 GRIK5Q16478 980 aa9.65□□□□□ -0.86
RAF1-212ENST00000494557 FAM98CQ17RN3 349 aaKnown RBP9.65□□□□□ -0.86
RAF1-212ENST00000494557 OLFM4Q6UX06 510 aa9.65□□□□□ -0.86
RAF1-212ENST00000494557 NBPF5PQ86XG9 351 aaPredicted RBP9.65□□□□□ -0.86
RAF1-212ENST00000494557 MMTAG2Q9BU76 263 aaKnown RBP9.65□□□□□ -0.86
RAF1-212ENST00000494557 BRMS1Q9HCU9 246 aa9.65□□□□□ -0.86
RAF1-212ENST00000494557 CCDC9Q9Y3X0 531 aaKnown RBP9.65□□□□□ -0.86
RAF1-212ENST00000494557 A0A087WWV3 80 aa9.65□□□□□ -0.87
RAF1-212ENST00000494557 GHRHRQ02643 423 aa9.65□□□□□ -0.87
RAF1-212ENST00000494557 SPAG1Q07617 926 aa9.65□□□□□ -0.87
RAF1-212ENST00000494557 PTGDRQ13258 359 aa9.65□□□□□ -0.87
RAF1-212ENST00000494557 PDIA5Q14554 519 aa9.65□□□□□ -0.87
RAF1-212ENST00000494557 NOM1Q5C9Z4 860 aaKnown RBP9.65□□□□□ -0.87
RAF1-212ENST00000494557 TTI2Q6NXR4 508 aa9.65□□□□□ -0.87
RAF1-212ENST00000494557 IQUBQ8NA54 791 aa9.65□□□□□ -0.87
RAF1-212ENST00000494557 KIF18AQ8NI77 898 aa9.65□□□□□ -0.87
RAF1-212ENST00000494557 HNRNPLLQ8WVV9 542 aaKnown RBP9.65□□□□□ -0.87
RAF1-212ENST00000494557 EPSTI1Q96J88 318 aa9.65□□□□□ -0.87
RAF1-212ENST00000494557 NFE2L3Q9Y4A8 694 aa9.65□□□□□ -0.87
RAF1-212ENST00000494557 CYP2D7A0A087X1C5 515 aa9.64□□□□□ -0.87
RAF1-212ENST00000494557 EFCAB8A8MWE9 144 aa9.64□□□□□ -0.87
RAF1-212ENST00000494557 PLSCR1O15162 318 aa9.64□□□□□ -0.87
RAF1-212ENST00000494557 GYPCP04921 128 aa9.64□□□□□ -0.87
RAF1-212ENST00000494557 AMPD2Q01433 879 aa9.64□□□□□ -0.87
RAF1-212ENST00000494557 DDR1Q08345 913 aa9.64□□□□□ -0.87
RAF1-212ENST00000494557 CHAF1AQ13111 956 aaPredicted RBP9.64□□□□□ -0.87
RAF1-212ENST00000494557 PNMA1Q8ND90 353 aa9.64□□□□□ -0.87
RAF1-212ENST00000494557 ZNF397Q8NF99 534 aaPredicted RBP9.64□□□□□ -0.87
RAF1-212ENST00000494557 TMEM47Q9BQJ4 181 aa9.64□□□□□ -0.87
RAF1-212ENST00000494557 ZNF287Q9HBT7 754 aa9.64□□□□□ -0.87
RAF1-212ENST00000494557 RAB21Q9UL25 225 aa9.64□□□□□ -0.87
RAF1-212ENST00000494557 PPP2R2CQ9Y2T4 447 aa9.64□□□□□ -0.87
RAF1-212ENST00000494557 V9GY48 417 aaPredicted RBP9.64□□□□□ -0.87
RAF1-212ENST00000494557 SSC5DA1L4H1 1573 aa9.64□□□□□ -0.87
RAF1-212ENST00000494557 SLU7O95391 586 aaKnown RBP9.64□□□□□ -0.87
RAF1-212ENST00000494557 VEGFAP15692 232 aaPredicted RBP9.64□□□□□ -0.87
RAF1-212ENST00000494557 TMC6Q7Z403 805 aa9.64□□□□□ -0.87
RAF1-212ENST00000494557 RETREG2Q8NC44 543 aa9.64□□□□□ -0.87
RAF1-212ENST00000494557 CTCFLQ8NI51 663 aaPredicted RBP9.64□□□□□ -0.87
RAF1-212ENST00000494557 TBC1D16Q8TBP0 767 aa9.64□□□□□ -0.87
RAF1-212ENST00000494557 ERCC4Q92889 916 aaPredicted RBP9.64□□□□□ -0.87
RAF1-212ENST00000494557 ZKSCAN3Q9BRR0 538 aa9.64□□□□□ -0.87
RAF1-212ENST00000494557 ZNF446Q9NWS9 450 aa9.64□□□□□ -0.87
RAF1-212ENST00000494557 OGFRQ9NZT2 677 aa9.64□□□□□ -0.87
RAF1-212ENST00000494557 ATP6V0A2Q9Y487 856 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms