RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 USP17L20D6RJB6 530 aa10.4□□□□□ -0.74
ITGB1-217ENST00000494395 SLC3A2P08195 630 aaKnown RBP10.4□□□□□ -0.74
ITGB1-217ENST00000494395 GCLCP48506 637 aaPredicted RBP10.4□□□□□ -0.74
ITGB1-217ENST00000494395 HERVK_113P62684 666 aa10.4□□□□□ -0.74
ITGB1-217ENST00000494395 IRX3P78415 501 aaPredicted RBP10.4□□□□□ -0.74
ITGB1-217ENST00000494395 USP17L24Q0WX57 530 aa10.4□□□□□ -0.74
ITGB1-217ENST00000494395 FAM47AQ5JRC9 791 aa10.4□□□□□ -0.74
ITGB1-217ENST00000494395 FBXO46Q6PJ61 603 aaPredicted RBP10.4□□□□□ -0.74
ITGB1-217ENST00000494395 ZNF444Q8N0Y2 327 aaPredicted RBP10.4□□□□□ -0.74
ITGB1-217ENST00000494395 ANKRD13CQ8N6S4 541 aa10.4□□□□□ -0.74
ITGB1-217ENST00000494395 LPAR1Q92633 364 aa10.4□□□□□ -0.74
ITGB1-217ENST00000494395 MKL1Q969V6 931 aa10.4□□□□□ -0.74
ITGB1-217ENST00000494395 CEP95Q96GE4 821 aa10.4□□□□□ -0.74
ITGB1-217ENST00000494395 TRIM47Q96LD4 638 aa10.4□□□□□ -0.74
ITGB1-217ENST00000494395 RPAP3Q9H6T3 665 aaPredicted RBP10.4□□□□□ -0.74
ITGB1-217ENST00000494395 GOPCQ9HD26 462 aa10.4□□□□□ -0.74
ITGB1-217ENST00000494395 TXNRD2Q9NNW7 524 aa10.4□□□□□ -0.74
ITGB1-217ENST00000494395 PPP4R2Q9NY27 417 aa10.4□□□□□ -0.74
ITGB1-217ENST00000494395 TRIM17Q9Y577 477 aa10.4□□□□□ -0.74
ITGB1-217ENST00000494395 PEX10O60683 326 aa10.39□□□□□ -0.75
ITGB1-217ENST00000494395 CNMDO75829 334 aa10.39□□□□□ -0.75
ITGB1-217ENST00000494395 HAND2P61296 217 aa10.39□□□□□ -0.75
ITGB1-217ENST00000494395 TFAP4Q01664 338 aa10.39□□□□□ -0.75
ITGB1-217ENST00000494395 PTH1RQ03431 593 aa10.39□□□□□ -0.75
ITGB1-217ENST00000494395 AKNAD1Q5T1N1 836 aa10.39□□□□□ -0.75
ITGB1-217ENST00000494395 SMCR8Q8TEV9 937 aaPredicted RBP10.39□□□□□ -0.75
ITGB1-217ENST00000494395 RUFY2Q8WXA3 655 aa10.39□□□□□ -0.75
ITGB1-217ENST00000494395 KCNK17Q96T54 332 aa10.39□□□□□ -0.75
ITGB1-217ENST00000494395 SH2D4AQ9H788 454 aa10.39□□□□□ -0.75
ITGB1-217ENST00000494395 EFCC1Q9HA90 598 aa10.39□□□□□ -0.75
ITGB1-217ENST00000494395 IL17RBQ9NRM6 502 aa10.39□□□□□ -0.75
ITGB1-217ENST00000494395 RBPJLQ9UBG7 517 aa10.39□□□□□ -0.75
ITGB1-217ENST00000494395 SYNPO2Q9UMS6 1093 aa10.39□□□□□ -0.75
ITGB1-217ENST00000494395 PTPN22Q9Y2R2 807 aa10.39□□□□□ -0.75
ITGB1-217ENST00000494395 NEDD4P46934 1319 aa10.38□□□□□ -0.75
ITGB1-217ENST00000494395 RCCD1A6NED2 376 aa10.38□□□□□ -0.75
ITGB1-217ENST00000494395 C3orf80F5H4A9 247 aa10.38□□□□□ -0.75
ITGB1-217ENST00000494395 WDR46O15213 610 aaKnown RBP10.38□□□□□ -0.75
ITGB1-217ENST00000494395 TTLL1O95922 423 aa10.38□□□□□ -0.75
ITGB1-217ENST00000494395 GNRH1P01148 92 aa10.38□□□□□ -0.75
ITGB1-217ENST00000494395 TSPY3P0CV98 308 aa10.38□□□□□ -0.75
ITGB1-217ENST00000494395 TSPY8P0CW00 308 aa10.38□□□□□ -0.75
ITGB1-217ENST00000494395 PCP11498 1178 aaKnown RBP10.38□□□□□ -0.75
ITGB1-217ENST00000494395 PSMC4P43686 418 aa10.38□□□□□ -0.75
ITGB1-217ENST00000494395 NUDT18Q6ZVK8 323 aa10.38□□□□□ -0.75
ITGB1-217ENST00000494395 SPICE1Q8N0Z3 855 aa10.38□□□□□ -0.75
ITGB1-217ENST00000494395 GTF3C2Q8WUA4 911 aaPredicted RBP10.38□□□□□ -0.75
ITGB1-217ENST00000494395 CLIP2Q9UDT6 1046 aa10.38□□□□□ -0.75
ITGB1-217ENST00000494395 HPS5Q9UPZ3 1129 aa10.38□□□□□ -0.75
ITGB1-217ENST00000494395 RBBP6Q7Z6E9 1792 aaKnown RBP10.38□□□□□ -0.75
ITGB1-217ENST00000494395 ZNF236Q9UL36 1845 aa10.37□□□□□ -0.75
ITGB1-217ENST00000494395 MYPNQ86TC9 1320 aa10.37□□□□□ -0.75
ITGB1-217ENST00000494395 TSPY2A6NKD2 308 aa10.37□□□□□ -0.75
ITGB1-217ENST00000494395 ZNF213O14771 459 aa10.37□□□□□ -0.75
ITGB1-217ENST00000494395 NMT2O60551 498 aa10.37□□□□□ -0.75
ITGB1-217ENST00000494395 NDUFB10O96000 172 aa10.37□□□□□ -0.75
ITGB1-217ENST00000494395 ATP2B2Q01814 1243 aa10.37□□□□□ -0.75
ITGB1-217ENST00000494395 KIF22Q14807 665 aa10.37□□□□□ -0.75
ITGB1-217ENST00000494395 Q3C1V9 767 aa10.37□□□□□ -0.75
ITGB1-217ENST00000494395 IFFO2Q5TF58 517 aa10.37□□□□□ -0.75
ITGB1-217ENST00000494395 GMCL1P1Q8NEA9 526 aa10.37□□□□□ -0.75
ITGB1-217ENST00000494395 MAP4K1Q92918 833 aa10.37□□□□□ -0.75
ITGB1-217ENST00000494395 ESYT1Q9BSJ8 1104 aa10.37□□□□□ -0.75
ITGB1-217ENST00000494395 TCP11L1Q9NUJ3 509 aa10.37□□□□□ -0.75
ITGB1-217ENST00000494395 BTBD7Q9P203 1132 aa10.37□□□□□ -0.75
ITGB1-217ENST00000494395 SRRDQ9UH36 339 aa10.37□□□□□ -0.75
ITGB1-217ENST00000494395 ADAMTS5Q9UNA0 930 aa10.37□□□□□ -0.75
ITGB1-217ENST00000494395 RABGAP1Q9Y3P9 1069 aa10.37□□□□□ -0.75
ITGB1-217ENST00000494395 PTCH2Q9Y6C5 1203 aa10.37□□□□□ -0.75
ITGB1-217ENST00000494395 CENPFP49454 3210 aa10.37□□□□□ -0.75
ITGB1-217ENST00000494395 F5H6K3 240 aa10.36□□□□□ -0.75
ITGB1-217ENST00000494395 RANBP6O60518 1105 aaKnown RBP10.36□□□□□ -0.75
ITGB1-217ENST00000494395 CYP21A2P08686 494 aa10.36□□□□□ -0.75
ITGB1-217ENST00000494395 PRMT2P55345 433 aa10.36□□□□□ -0.75
ITGB1-217ENST00000494395 FCGRTP55899 365 aa10.36□□□□□ -0.75
ITGB1-217ENST00000494395 ERVK-9P63128 1117 aa10.36□□□□□ -0.75
ITGB1-217ENST00000494395 ERVK-24P63145 666 aa10.36□□□□□ -0.75
ITGB1-217ENST00000494395 KLRC3Q07444 240 aa10.36□□□□□ -0.75
ITGB1-217ENST00000494395 COG2Q14746 738 aa10.36□□□□□ -0.75
ITGB1-217ENST00000494395 ARHGEF6Q15052 776 aa10.36□□□□□ -0.75
ITGB1-217ENST00000494395 PROX2Q3B8N5 592 aa10.36□□□□□ -0.75
ITGB1-217ENST00000494395 FAM83BQ5T0W9 1011 aa10.36□□□□□ -0.75
ITGB1-217ENST00000494395 RCSD1Q6JBY9 416 aa10.36□□□□□ -0.75
ITGB1-217ENST00000494395 MFSD6Q6ZSS7 791 aa10.36□□□□□ -0.75
ITGB1-217ENST00000494395 PACS2Q86VP3 889 aa10.36□□□□□ -0.75
ITGB1-217ENST00000494395 LRRC47Q8N1G4 583 aaKnown RBP10.36□□□□□ -0.75
ITGB1-217ENST00000494395 TATDN2Q93075 761 aa10.36□□□□□ -0.75
ITGB1-217ENST00000494395 LSG1Q9H089 658 aaKnown RBP10.36□□□□□ -0.75
ITGB1-217ENST00000494395 PORCNQ9H237 461 aa10.36□□□□□ -0.75
ITGB1-217ENST00000494395 RNF41Q9H4P4 317 aaPredicted RBP10.36□□□□□ -0.75
ITGB1-217ENST00000494395 FBXO28Q9NVF7 368 aa10.36□□□□□ -0.75
ITGB1-217ENST00000494395 CTNNA3Q9UI47 895 aa10.36□□□□□ -0.75
ITGB1-217ENST00000494395 GABRQQ9UN88 632 aa10.36□□□□□ -0.75
ITGB1-217ENST00000494395 TAF6LQ9Y6J9 622 aa10.36□□□□□ -0.75
ITGB1-217ENST00000494395 FMNL1O95466 1100 aaPredicted RBP10.35□□□□□ -0.75
ITGB1-217ENST00000494395 NT5C2P49902 561 aa10.35□□□□□ -0.75
ITGB1-217ENST00000494395 PRKCZQ05513 592 aa10.35□□□□□ -0.75
ITGB1-217ENST00000494395 IMMTQ16891 758 aaKnown RBP10.35□□□□□ -0.75
ITGB1-217ENST00000494395 RASGRP2Q7LDG7 609 aa10.35□□□□□ -0.75
ITGB1-217ENST00000494395 REPS2Q8NFH8 660 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms