RNA–Protein interactions for RNA: ENST00000494012.1

MACF1-222, Transcript of microtubule-actin crosslinking factor 1, human

TSL 4

Gene MACF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-222	ENST00000494012	SPATC1L	Q9H0A9	340 aa		11.69	□□□□□ -0.54
MACF1-222	ENST00000494012	SRRD	Q9UH36	339 aa		11.69	□□□□□ -0.54
MACF1-222	ENST00000494012	PTPN22	Q9Y2R2	807 aa		11.69	□□□□□ -0.54
MACF1-222	ENST00000494012	MYH6	P13533	1939 aa		11.68	□□□□□ -0.54
MACF1-222	ENST00000494012	FRMPD2	Q68DX3	1309 aa	Predicted RBP	11.68	□□□□□ -0.54
MACF1-222	ENST00000494012	ATP2A1	O14983	1001 aa		11.68	□□□□□ -0.54
MACF1-222	ENST00000494012	ECM2	O94769	699 aa	Predicted RBP	11.68	□□□□□ -0.54
MACF1-222	ENST00000494012	SLC25A27	O95847	323 aa		11.68	□□□□□ -0.54
MACF1-222	ENST00000494012	PARP1	P09874	1014 aa	Known RBP	11.68	□□□□□ -0.54
MACF1-222	ENST00000494012	PSMA5	P28066	241 aa		11.68	□□□□□ -0.54
MACF1-222	ENST00000494012	CTGF	P29279	349 aa		11.68	□□□□□ -0.54
MACF1-222	ENST00000494012	OAZ1	P54368	228 aa		11.68	□□□□□ -0.54
MACF1-222	ENST00000494012	POTEE	Q6S8J3	1075 aa		11.68	□□□□□ -0.54
MACF1-222	ENST00000494012	DHX32	Q7L7V1	743 aa	Known RBP	11.68	□□□□□ -0.54
MACF1-222	ENST00000494012	RASGRP2	Q7LDG7	609 aa		11.68	□□□□□ -0.54
MACF1-222	ENST00000494012	CATIP	Q7Z7H3	387 aa		11.68	□□□□□ -0.54
MACF1-222	ENST00000494012	RASEF	Q8IZ41	740 aa		11.68	□□□□□ -0.54
MACF1-222	ENST00000494012	SOCS4	Q8WXH5	440 aa		11.68	□□□□□ -0.54
MACF1-222	ENST00000494012	CHMP4C	Q96CF2	233 aa		11.68	□□□□□ -0.54
MACF1-222	ENST00000494012	USP26	Q9BXU7	913 aa		11.68	□□□□□ -0.54
MACF1-222	ENST00000494012	MROH8	Q9H579	483 aa		11.68	□□□□□ -0.54
MACF1-222	ENST00000494012	SLC38A10	Q9HBR0	1119 aa		11.68	□□□□□ -0.54
MACF1-222	ENST00000494012	ZNF214	Q9UL59	606 aa	Predicted RBP	11.68	□□□□□ -0.54
MACF1-222	ENST00000494012	SNX14	Q9Y5W7	946 aa		11.68	□□□□□ -0.54
MACF1-222	ENST00000494012	IVNS1ABP	Q9Y6Y0	642 aa		11.68	□□□□□ -0.54
MACF1-222	ENST00000494012	DOCK3	Q8IZD9	2030 aa		11.67	□□□□□ -0.54
MACF1-222	ENST00000494012	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.67	□□□□□ -0.54
MACF1-222	ENST00000494012	CCDC69	A6NI79	296 aa		11.67	□□□□□ -0.54
MACF1-222	ENST00000494012	SH2B2	O14492	632 aa	Predicted RBP	11.67	□□□□□ -0.54
MACF1-222	ENST00000494012	PEX10	O60683	326 aa		11.67	□□□□□ -0.54
MACF1-222	ENST00000494012	STAT3	P40763	770 aa		11.67	□□□□□ -0.54
MACF1-222	ENST00000494012	LIFR	P42702	1097 aa		11.67	□□□□□ -0.54
MACF1-222	ENST00000494012	CAP1	Q01518	475 aa		11.67	□□□□□ -0.54
MACF1-222	ENST00000494012	PRKCZ	Q05513	592 aa		11.67	□□□□□ -0.54
MACF1-222	ENST00000494012	TMEM132B	Q14DG7	1078 aa		11.67	□□□□□ -0.54
MACF1-222	ENST00000494012		Q3C1V9	767 aa		11.67	□□□□□ -0.54
MACF1-222	ENST00000494012	ADCK5	Q3MIX3	580 aa		11.67	□□□□□ -0.54
MACF1-222	ENST00000494012	WDR78	Q5VTH9	848 aa		11.67	□□□□□ -0.54
MACF1-222	ENST00000494012	SNRNP48	Q6IEG0	339 aa	Known RBP	11.67	□□□□□ -0.54
MACF1-222	ENST00000494012	BTNL9	Q6UXG8	535 aa		11.67	□□□□□ -0.54
MACF1-222	ENST00000494012	NFXL1	Q6ZNB6	911 aa		11.67	□□□□□ -0.54
MACF1-222	ENST00000494012	GPR142	Q7Z601	462 aa		11.67	□□□□□ -0.54
MACF1-222	ENST00000494012	PLEKHH3	Q7Z736	793 aa		11.67	□□□□□ -0.54
MACF1-222	ENST00000494012	RIOX2	Q8IUF8	465 aa		11.67	□□□□□ -0.54
MACF1-222	ENST00000494012	REPS2	Q8NFH8	660 aa		11.67	□□□□□ -0.54
MACF1-222	ENST00000494012	RAET1E	Q8TD07	263 aa		11.67	□□□□□ -0.54
MACF1-222	ENST00000494012	IGDCC4	Q8TDY8	1250 aa		11.67	□□□□□ -0.54
MACF1-222	ENST00000494012	JAKMIP1	Q96N16	626 aa	Known RBP	11.67	□□□□□ -0.54
MACF1-222	ENST00000494012	MOV10L1	Q9BXT6	1211 aa	Known RBP	11.67	□□□□□ -0.54
MACF1-222	ENST00000494012	PORCN	Q9H237	461 aa		11.67	□□□□□ -0.54
MACF1-222	ENST00000494012	LY9	Q9HBG7	655 aa		11.67	□□□□□ -0.54
MACF1-222	ENST00000494012	GPCPD1	Q9NPB8	672 aa		11.67	□□□□□ -0.54
MACF1-222	ENST00000494012	PNMA2	Q9UL42	364 aa		11.67	□□□□□ -0.54
MACF1-222	ENST00000494012	PRR12	Q9ULL5	1215 aa		11.67	□□□□□ -0.54
MACF1-222	ENST00000494012	STRN	O43815	780 aa		11.66	□□□□□ -0.54
MACF1-222	ENST00000494012	DDAH1	O94760	285 aa		11.66	□□□□□ -0.54
MACF1-222	ENST00000494012	CALM1	P0DP23	149 aa		11.66	□□□□□ -0.54
MACF1-222	ENST00000494012	CALM2	P0DP24	149 aa		11.66	□□□□□ -0.54
MACF1-222	ENST00000494012	CALM3	P0DP25	149 aa		11.66	□□□□□ -0.54
MACF1-222	ENST00000494012	ERCC3	P19447	782 aa		11.66	□□□□□ -0.54
MACF1-222	ENST00000494012	FGD1	P98174	961 aa		11.66	□□□□□ -0.54
MACF1-222	ENST00000494012	MLLT1	Q03111	559 aa	Predicted RBP	11.66	□□□□□ -0.54
MACF1-222	ENST00000494012	IRF5	Q13568	498 aa		11.66	□□□□□ -0.54
MACF1-222	ENST00000494012	SYDE2	Q5VT97	1194 aa		11.66	□□□□□ -0.54
MACF1-222	ENST00000494012	BLOC1S2	Q6QNY1	142 aa		11.66	□□□□□ -0.54
MACF1-222	ENST00000494012	NCAPG2	Q86XI2	1143 aa		11.66	□□□□□ -0.54
MACF1-222	ENST00000494012	MAP3K14	Q99558	947 aa		11.66	□□□□□ -0.54
MACF1-222	ENST00000494012	NUDT12	Q9BQG2	462 aa		11.66	□□□□□ -0.54
MACF1-222	ENST00000494012	PLXNA1	Q9UIW2	1896 aa		11.66	□□□□□ -0.54
MACF1-222	ENST00000494012	SLC15A5	A6NIM6	579 aa		11.65	□□□□□ -0.54
MACF1-222	ENST00000494012	GOLGA8H	P0CJ92	632 aa		11.65	□□□□□ -0.54
MACF1-222	ENST00000494012	CAST	P20810	708 aa	Known RBP	11.65	□□□□□ -0.54
MACF1-222	ENST00000494012	KIF5B	P33176	963 aa		11.65	□□□□□ -0.54
MACF1-222	ENST00000494012	SLC16A2	P36021	539 aa		11.65	□□□□□ -0.54
MACF1-222	ENST00000494012	RGS2	P41220	211 aa		11.65	□□□□□ -0.54
MACF1-222	ENST00000494012	FLT3LG	P49771	235 aa		11.65	□□□□□ -0.54
MACF1-222	ENST00000494012	ANAPC15	P60006	121 aa		11.65	□□□□□ -0.54
MACF1-222	ENST00000494012	TROAP	Q12815	778 aa		11.65	□□□□□ -0.54
MACF1-222	ENST00000494012	GRM4	Q14833	912 aa		11.65	□□□□□ -0.54
MACF1-222	ENST00000494012	SLC9C1	Q4G0N8	1177 aa		11.65	□□□□□ -0.54
MACF1-222	ENST00000494012	TTBK2	Q6IQ55	1244 aa		11.65	□□□□□ -0.54
MACF1-222	ENST00000494012	SYNE3	Q6ZMZ3	975 aa		11.65	□□□□□ -0.54
MACF1-222	ENST00000494012	NBPF11	Q86T75	865 aa		11.65	□□□□□ -0.54
MACF1-222	ENST00000494012	SGMS1	Q86VZ5	419 aa		11.65	□□□□□ -0.54
MACF1-222	ENST00000494012	ZNF654	Q8IZM8	581 aa		11.65	□□□□□ -0.54
MACF1-222	ENST00000494012	ABRA	Q8N0Z2	381 aa		11.65	□□□□□ -0.54
MACF1-222	ENST00000494012	CPXCR1	Q8N123	301 aa		11.65	□□□□□ -0.54
MACF1-222	ENST00000494012	SLAIN1	Q8ND83	568 aa		11.65	□□□□□ -0.54
MACF1-222	ENST00000494012	CTCFL	Q8NI51	663 aa	Predicted RBP	11.65	□□□□□ -0.54
MACF1-222	ENST00000494012	RANBP17	Q9H2T7	1088 aa	Known RBP	11.65	□□□□□ -0.54
MACF1-222	ENST00000494012	RAVER2	Q9HCJ3	691 aa	Known RBP	11.65	□□□□□ -0.54
MACF1-222	ENST00000494012	FBXO40	Q9UH90	709 aa		11.65	□□□□□ -0.54
MACF1-222	ENST00000494012	HPS5	Q9UPZ3	1129 aa		11.65	□□□□□ -0.54
MACF1-222	ENST00000494012	SLC12A7	Q9Y666	1083 aa		11.65	□□□□□ -0.54
MACF1-222	ENST00000494012	PTCH2	Q9Y6C5	1203 aa		11.65	□□□□□ -0.54
MACF1-222	ENST00000494012	ZNFX1	Q9P2E3	1918 aa	Known RBP	11.64	□□□□□ -0.55
MACF1-222	ENST00000494012	KLRF2	D3W0D1	207 aa		11.64	□□□□□ -0.55
MACF1-222	ENST00000494012	DHX16	O60231	1041 aa	Known RBP	11.64	□□□□□ -0.55
MACF1-222	ENST00000494012	ICAM1	P05362	532 aa		11.64	□□□□□ -0.55
MACF1-222	ENST00000494012	FCER1A	P12319	257 aa		11.64	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms