RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 WDR46O15213 610 aaKnown RBP14.61□□□□□ -0.07
VPS52-220ENST00000493674 NFKBIBQ15653 356 aa14.61□□□□□ -0.07
VPS52-220ENST00000493674 LDLRAD1Q5T700 205 aa14.61□□□□□ -0.07
VPS52-220ENST00000493674 MAP1SQ66K74 1059 aaPredicted RBP14.61□□□□□ -0.07
VPS52-220ENST00000493674 WWC2Q6AWC2 1192 aa14.61□□□□□ -0.07
VPS52-220ENST00000493674 TYW1BQ6NUM6 668 aa14.61□□□□□ -0.07
VPS52-220ENST00000493674 ZNF280CQ8ND82 737 aa14.61□□□□□ -0.07
VPS52-220ENST00000493674 RRP36Q96EU6 259 aaKnown RBP14.61□□□□□ -0.07
VPS52-220ENST00000493674 GBP4Q96PP9 640 aa14.61□□□□□ -0.07
VPS52-220ENST00000493674 PIGSQ96S52 555 aa14.61□□□□□ -0.07
VPS52-220ENST00000493674 BARHL2Q9NY43 387 aa14.61□□□□□ -0.07
VPS52-220ENST00000493674 VPS54Q9P1Q0 977 aa14.61□□□□□ -0.07
VPS52-220ENST00000493674 AFG3L2Q9Y4W6 797 aa14.61□□□□□ -0.07
VPS52-220ENST00000493674 ATP6V1DQ9Y5K8 247 aa14.61□□□□□ -0.07
VPS52-220ENST00000493674 THSD7BQ9C0I4 1608 aa14.61□□□□□ -0.07
VPS52-220ENST00000493674 ZNFX1Q9P2E3 1918 aaKnown RBP14.6□□□□□ -0.07
VPS52-220ENST00000493674 ESYT2A0FGR8 921 aa14.6□□□□□ -0.07
VPS52-220ENST00000493674 USP17L10C9JJH3 530 aa14.6□□□□□ -0.07
VPS52-220ENST00000493674 USP14P54578 494 aa14.6□□□□□ -0.07
VPS52-220ENST00000493674 BACE1P56817 501 aa14.6□□□□□ -0.07
VPS52-220ENST00000493674 TRIM29Q14134 588 aa14.6□□□□□ -0.07
VPS52-220ENST00000493674 SH3D19Q5HYK7 790 aa14.6□□□□□ -0.07
VPS52-220ENST00000493674 FAM83BQ5T0W9 1011 aa14.6□□□□□ -0.07
VPS52-220ENST00000493674 SYDE2Q5VT97 1194 aa14.6□□□□□ -0.07
VPS52-220ENST00000493674 BRAPQ7Z569 592 aa14.6□□□□□ -0.07
VPS52-220ENST00000493674 ANKRD13AQ8IZ07 590 aa14.6□□□□□ -0.07
VPS52-220ENST00000493674 DAGLBQ8NCG7 672 aa14.6□□□□□ -0.07
VPS52-220ENST00000493674 TNFRSF25Q93038 417 aa14.6□□□□□ -0.07
VPS52-220ENST00000493674 CHAMP1Q96JM3 812 aa14.6□□□□□ -0.07
VPS52-220ENST00000493674 FEZ1Q99689 392 aa14.6□□□□□ -0.07
VPS52-220ENST00000493674 FOXP1Q9H334 677 aaPredicted RBP14.6□□□□□ -0.07
VPS52-220ENST00000493674 EMILIN3Q9NT22 766 aa14.6□□□□□ -0.07
VPS52-220ENST00000493674 KCNJ14Q9UNX9 436 aa14.6□□□□□ -0.07
VPS52-220ENST00000493674 PNMA6FA0A0J9YX94 578 aa14.59□□□□□ -0.07
VPS52-220ENST00000493674 SPDYE5A6NIY4 337 aa14.59□□□□□ -0.07
VPS52-220ENST00000493674 TMEM232C9JQI7 657 aa14.59□□□□□ -0.07
VPS52-220ENST00000493674 TRAF5O00463 557 aa14.59□□□□□ -0.07
VPS52-220ENST00000493674 ZBTB5O15062 677 aa14.59□□□□□ -0.07
VPS52-220ENST00000493674 PPP1R11O60927 126 aaPredicted RBP14.59□□□□□ -0.07
VPS52-220ENST00000493674 XBP1P17861 261 aa14.59□□□□□ -0.07
VPS52-220ENST00000493674 MCM4P33991 863 aa14.59□□□□□ -0.07
VPS52-220ENST00000493674 SLC16A2P36021 539 aa14.59□□□□□ -0.07
VPS52-220ENST00000493674 SPP2Q13103 211 aa14.59□□□□□ -0.07
VPS52-220ENST00000493674 MTMR2Q13614 643 aa14.59□□□□□ -0.07
VPS52-220ENST00000493674 PRKG1Q13976 671 aa14.59□□□□□ -0.07
VPS52-220ENST00000493674 PPP1R18Q6NYC8 613 aa14.59□□□□□ -0.07
VPS52-220ENST00000493674 SPICE1Q8N0Z3 855 aa14.59□□□□□ -0.07
VPS52-220ENST00000493674 TMEM87AQ8NBN3 555 aa14.59□□□□□ -0.07
VPS52-220ENST00000493674 GPKOWQ92917 476 aaPredicted RBP eCLIP14.59□□□□□ -0.07
VPS52-220ENST00000493674 CREBZFQ9NS37 354 aa14.59□□□□□ -0.07
VPS52-220ENST00000493674 ZHX2Q9Y6X8 837 aa14.59□□□□□ -0.07
VPS52-220ENST00000493674 C19orf81C9J6K1 198 aa14.58□□□□□ -0.08
VPS52-220ENST00000493674 M0R2N6 131 aa14.58□□□□□ -0.08
VPS52-220ENST00000493674 VCAM1P19320 739 aa14.58□□□□□ -0.08
VPS52-220ENST00000493674 STAT2P52630 851 aa14.58□□□□□ -0.08
VPS52-220ENST00000493674 FKBP1BP68106 108 aa14.58□□□□□ -0.08
VPS52-220ENST00000493674 GALNT17Q6IS24 598 aa14.58□□□□□ -0.08
VPS52-220ENST00000493674 FAM160B2Q86V87 743 aa14.58□□□□□ -0.08
VPS52-220ENST00000493674 DIS3L2Q8IYB7 885 aaKnown RBP14.58□□□□□ -0.08
VPS52-220ENST00000493674 CCDC148Q8NFR7 591 aa14.58□□□□□ -0.08
VPS52-220ENST00000493674 ZMYND12Q9H0C1 365 aa14.58□□□□□ -0.08
VPS52-220ENST00000493674 RANBP17Q9H2T7 1088 aaKnown RBP14.58□□□□□ -0.08
VPS52-220ENST00000493674 SEC63Q9UGP8 760 aaKnown RBP14.58□□□□□ -0.08
VPS52-220ENST00000493674 FEM1BQ9UK73 627 aa14.58□□□□□ -0.08
VPS52-220ENST00000493674 PRR12Q9ULL5 1215 aa14.58□□□□□ -0.08
VPS52-220ENST00000493674 CSADQ9Y600 493 aa14.58□□□□□ -0.08
VPS52-220ENST00000493674 WDR81Q562E7 1941 aa14.57□□□□□ -0.08
VPS52-220ENST00000493674 TMEM88BA6NKF7 163 aa14.57□□□□□ -0.08
VPS52-220ENST00000493674 CALML3P27482 149 aa14.57□□□□□ -0.08
VPS52-220ENST00000493674 DNM1Q05193 864 aaKnown RBP14.57□□□□□ -0.08
VPS52-220ENST00000493674 PPATQ06203 517 aa14.57□□□□□ -0.08
VPS52-220ENST00000493674 SAFBQ15424 915 aaKnown RBP eCLIP14.57□□□□□ -0.08
VPS52-220ENST00000493674 ZYXQ15942 572 aaKnown RBP14.57□□□□□ -0.08
VPS52-220ENST00000493674 CDC37Q16543 378 aaPredicted RBP14.57□□□□□ -0.08
VPS52-220ENST00000493674 QRICH1Q2TAL8 776 aa14.57□□□□□ -0.08
VPS52-220ENST00000493674 MYSM1Q5VVJ2 828 aa14.57□□□□□ -0.08
VPS52-220ENST00000493674 ATL3Q6DD88 541 aa14.57□□□□□ -0.08
VPS52-220ENST00000493674 MCTP1Q6DN14 999 aa14.57□□□□□ -0.08
VPS52-220ENST00000493674 FAM173BQ6P4H8 233 aa14.57□□□□□ -0.08
VPS52-220ENST00000493674 MOB2Q70IA6 237 aa14.57□□□□□ -0.08
VPS52-220ENST00000493674 ARMC9Q7Z3E5 817 aa14.57□□□□□ -0.08
VPS52-220ENST00000493674 HEATR3Q7Z4Q2 680 aa14.57□□□□□ -0.08
VPS52-220ENST00000493674 ERO1BQ86YB8 467 aa14.57□□□□□ -0.08
VPS52-220ENST00000493674 HOMER1Q86YM7 354 aa14.57□□□□□ -0.08
VPS52-220ENST00000493674 OXER1Q8TDS5 423 aa14.57□□□□□ -0.08
VPS52-220ENST00000493674 CCDC12Q8WUD4 166 aaPredicted RBP14.57□□□□□ -0.08
VPS52-220ENST00000493674 CHURC1Q8WUH1 139 aa14.57□□□□□ -0.08
VPS52-220ENST00000493674 PIBF1Q8WXW3 757 aa14.57□□□□□ -0.08
VPS52-220ENST00000493674 CLMNQ96JQ2 1002 aa14.57□□□□□ -0.08
VPS52-220ENST00000493674 VAT1LQ9HCJ6 419 aa14.57□□□□□ -0.08
VPS52-220ENST00000493674 KCNH4Q9UQ05 1017 aa14.57□□□□□ -0.08
VPS52-220ENST00000493674 KIAA1217Q5T5P2 1943 aa14.56□□□□□ -0.08
VPS52-220ENST00000493674 DDX11L8A8MPP1 907 aa14.56□□□□□ -0.08
VPS52-220ENST00000493674 BTBD18B2RXH4 712 aa14.56□□□□□ -0.08
VPS52-220ENST00000493674 ADAMTS3O15072 1205 aa14.56□□□□□ -0.08
VPS52-220ENST00000493674 RAD21O60216 631 aa14.56□□□□□ -0.08
VPS52-220ENST00000493674 KRT2P35908 639 aa14.56□□□□□ -0.08
VPS52-220ENST00000493674 FMR1Q06787 632 aaKnown RBP eCLIP14.56□□□□□ -0.08
VPS52-220ENST00000493674 PPIL2Q13356 520 aa14.56□□□□□ -0.08
VPS52-220ENST00000493674 DGKZQ13574 1117 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms