RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 GCM1Q9NP62 436 aa5.66□□□□□ -1.5
PTCD3-218ENST00000493430 UBP1Q9NZI7 540 aa5.66□□□□□ -1.5
PTCD3-218ENST00000493430 EIF4G1Q04637 1599 aaKnown RBP5.65□□□□□ -1.5
PTCD3-218ENST00000493430 HRKO00198 91 aa5.65□□□□□ -1.5
PTCD3-218ENST00000493430 INHBBP09529 407 aa5.65□□□□□ -1.5
PTCD3-218ENST00000493430 ENDOUP21128 410 aaKnown RBP5.65□□□□□ -1.5
PTCD3-218ENST00000493430 RTP1P59025 263 aa5.65□□□□□ -1.5
PTCD3-218ENST00000493430 MRPL58Q14197 206 aaKnown RBP5.65□□□□□ -1.5
PTCD3-218ENST00000493430 GIPC2Q8TF65 315 aa5.65□□□□□ -1.5
PTCD3-218ENST00000493430 NKD1Q969G9 470 aa5.65□□□□□ -1.5
PTCD3-218ENST00000493430 ZNF512BQ96KM6 892 aaPredicted RBP5.65□□□□□ -1.5
PTCD3-218ENST00000493430 CHST7Q9NS84 486 aa5.65□□□□□ -1.5
PTCD3-218ENST00000493430 TNFRSF10DQ9UBN6 386 aa5.65□□□□□ -1.5
PTCD3-218ENST00000493430 RFXAPO00287 272 aa5.64□□□□□ -1.51
PTCD3-218ENST00000493430 EFEMP2O95967 443 aa5.64□□□□□ -1.51
PTCD3-218ENST00000493430 NME1P15531 152 aaKnown RBP5.64□□□□□ -1.51
PTCD3-218ENST00000493430 PNLIPP16233 465 aa5.64□□□□□ -1.51
PTCD3-218ENST00000493430 SRSF3P84103 164 aaKnown RBP5.64□□□□□ -1.51
PTCD3-218ENST00000493430 BBS9Q3SYG4 887 aa5.64□□□□□ -1.51
PTCD3-218ENST00000493430 NT5C1AQ9BXI3 368 aa5.64□□□□□ -1.51
PTCD3-218ENST00000493430 MKRN2Q9H000 416 aaKnown RBP5.64□□□□□ -1.51
PTCD3-218ENST00000493430 SIRT5Q9NXA8 310 aa5.64□□□□□ -1.51
PTCD3-218ENST00000493430 KCTD3Q9Y597 815 aa5.64□□□□□ -1.51
PTCD3-218ENST00000493430 WTIPA6NIX2 430 aaPredicted RBP5.63□□□□□ -1.51
PTCD3-218ENST00000493430 TCERG1LQ5VWI1 586 aa5.63□□□□□ -1.51
PTCD3-218ENST00000493430 OLFML2BQ68BL8 750 aa5.63□□□□□ -1.51
PTCD3-218ENST00000493430 GALNT18Q6P9A2 607 aa5.63□□□□□ -1.51
PTCD3-218ENST00000493430 ZPBP2Q6X784 338 aa5.63□□□□□ -1.51
PTCD3-218ENST00000493430 SLITRK4Q8IW52 837 aa5.63□□□□□ -1.51
PTCD3-218ENST00000493430 TMEM151BQ8IW70 566 aa5.63□□□□□ -1.51
PTCD3-218ENST00000493430 TMEM192Q8IY95 271 aa5.63□□□□□ -1.51
PTCD3-218ENST00000493430 FCRL2Q96LA5 508 aaPredicted RBP5.63□□□□□ -1.51
PTCD3-218ENST00000493430 DHRS1Q96LJ7 313 aa5.63□□□□□ -1.51
PTCD3-218ENST00000493430 SLC6A18Q96N87 628 aa5.63□□□□□ -1.51
PTCD3-218ENST00000493430 ANTXR1Q9H6X2 564 aa5.63□□□□□ -1.51
PTCD3-218ENST00000493430 FBXL21Q9UKT6 434 aa5.63□□□□□ -1.51
PTCD3-218ENST00000493430 MINPP1Q9UNW1 487 aa5.63□□□□□ -1.51
PTCD3-218ENST00000493430 PCDHB12Q9Y5F1 795 aa5.63□□□□□ -1.51
PTCD3-218ENST00000493430 MEIS3P2A8K0S8 358 aa5.62□□□□□ -1.51
PTCD3-218ENST00000493430 FADS2P1A8MWK0 482 aa5.62□□□□□ -1.51
PTCD3-218ENST00000493430 ABLIM1O14639 778 aa5.62□□□□□ -1.51
PTCD3-218ENST00000493430 TNFRSF10CO14798 259 aa5.62□□□□□ -1.51
PTCD3-218ENST00000493430 ARL4AP40617 200 aa5.62□□□□□ -1.51
PTCD3-218ENST00000493430 CTSWP56202 376 aa5.62□□□□□ -1.51
PTCD3-218ENST00000493430 AUHQ13825 339 aaKnown RBP5.62□□□□□ -1.51
PTCD3-218ENST00000493430 SIGLEC10Q96LC7 697 aa5.62□□□□□ -1.51
PTCD3-218ENST00000493430 PLCD4Q9BRC7 762 aa5.62□□□□□ -1.51
PTCD3-218ENST00000493430 PARD6AQ9NPB6 346 aa5.62□□□□□ -1.51
PTCD3-218ENST00000493430 MBD1Q9UIS9 605 aaPredicted RBP5.62□□□□□ -1.51
PTCD3-218ENST00000493430 IRAK3Q9Y616 596 aa5.62□□□□□ -1.51
PTCD3-218ENST00000493430 TAF6LQ9Y6J9 622 aa5.62□□□□□ -1.51
PTCD3-218ENST00000493430 B8ZZF3 427 aa5.61□□□□□ -1.51
PTCD3-218ENST00000493430 MEIS1O00470 390 aa5.61□□□□□ -1.51
PTCD3-218ENST00000493430 PRRG2O14669 202 aa5.61□□□□□ -1.51
PTCD3-218ENST00000493430 MPOP05164 745 aa5.61□□□□□ -1.51
PTCD3-218ENST00000493430 BMP7P18075 431 aa5.61□□□□□ -1.51
PTCD3-218ENST00000493430 HOXA5P20719 270 aa5.61□□□□□ -1.51
PTCD3-218ENST00000493430 SDHBP21912 280 aa5.61□□□□□ -1.51
PTCD3-218ENST00000493430 VIPR1P32241 457 aa5.61□□□□□ -1.51
PTCD3-218ENST00000493430 BMP8BP34820 402 aa5.61□□□□□ -1.51
PTCD3-218ENST00000493430 YBX1P67809 324 aaKnown RBP5.61□□□□□ -1.51
PTCD3-218ENST00000493430 INTS3Q68E01 1043 aaKnown RBP5.61□□□□□ -1.51
PTCD3-218ENST00000493430 KIAA0825Q8IV33 1275 aa5.61□□□□□ -1.51
PTCD3-218ENST00000493430 SLC9A7Q96T83 725 aa5.61□□□□□ -1.51
PTCD3-218ENST00000493430 SPON2Q9BUD6 331 aa5.61□□□□□ -1.51
PTCD3-218ENST00000493430 CDADC1Q9BWV3 514 aa5.61□□□□□ -1.51
PTCD3-218ENST00000493430 ZCCHC4Q9H5U6 513 aa5.61□□□□□ -1.51
PTCD3-218ENST00000493430 GFOD1Q9NXC2 390 aa5.61□□□□□ -1.51
PTCD3-218ENST00000493430 PRR13Q9NZ81 148 aa5.61□□□□□ -1.51
PTCD3-218ENST00000493430 NCANO14594 1321 aa5.6□□□□□ -1.51
PTCD3-218ENST00000493430 A0A1W2PQ45 241 aaPredicted RBP5.6□□□□□ -1.51
PTCD3-218ENST00000493430 A0A1W2PQY0 241 aa5.6□□□□□ -1.51
PTCD3-218ENST00000493430 N4BP3O15049 544 aa5.6□□□□□ -1.51
PTCD3-218ENST00000493430 ZNF205O95201 554 aa5.6□□□□□ -1.51
PTCD3-218ENST00000493430 VAV1P15498 845 aa5.6□□□□□ -1.51
PTCD3-218ENST00000493430 CTSKP43235 329 aa5.6□□□□□ -1.51
PTCD3-218ENST00000493430 ERVFRD-1P60508 538 aa5.6□□□□□ -1.51
PTCD3-218ENST00000493430 LAPTM5Q13571 262 aa5.6□□□□□ -1.51
PTCD3-218ENST00000493430 SSPNQ14714 243 aa5.6□□□□□ -1.51
PTCD3-218ENST00000493430 HSF5Q4G112 596 aaPredicted RBP5.6□□□□□ -1.51
PTCD3-218ENST00000493430 TMEM87AQ8NBN3 555 aa5.6□□□□□ -1.51
PTCD3-218ENST00000493430 EAF1Q96JC9 268 aaPredicted RBP5.6□□□□□ -1.51
PTCD3-218ENST00000493430 CNTD2Q9H8S5 307 aa5.6□□□□□ -1.51
PTCD3-218ENST00000493430 ERVK13-1Q9NX77 482 aa5.6□□□□□ -1.51
PTCD3-218ENST00000493430 GPR55Q9Y2T6 319 aaPredicted RBP5.6□□□□□ -1.51
PTCD3-218ENST00000493430 GSNP06396 782 aa5.59□□□□□ -1.51
PTCD3-218ENST00000493430 IMPDH2P12268 514 aa5.59□□□□□ -1.51
PTCD3-218ENST00000493430 PRKCAP17252 672 aa5.59□□□□□ -1.51
PTCD3-218ENST00000493430 PI3P19957 117 aa5.59□□□□□ -1.51
PTCD3-218ENST00000493430 CYP4F8P98187 520 aa5.59□□□□□ -1.51
PTCD3-218ENST00000493430 TMEM62Q0P6H9 643 aa5.59□□□□□ -1.51
PTCD3-218ENST00000493430 C7orf61Q8IZ16 206 aa5.59□□□□□ -1.51
PTCD3-218ENST00000493430 DSCC1Q9BVC3 393 aa5.59□□□□□ -1.51
PTCD3-218ENST00000493430 SUCOQ9UBS9 1254 aaKnown RBP5.59□□□□□ -1.51
PTCD3-218ENST00000493430 EPHB3P54753 998 aa5.58□□□□□ -1.52
PTCD3-218ENST00000493430 KIR3DS1Q14943 382 aa5.58□□□□□ -1.52
PTCD3-218ENST00000493430 SLCO6A1Q86UG4 719 aa5.58□□□□□ -1.52
PTCD3-218ENST00000493430 CCDC144CPQ8IYA2 1237 aa5.58□□□□□ -1.52
PTCD3-218ENST00000493430 MARCH10Q8NA82 808 aaPredicted RBP5.58□□□□□ -1.52
PTCD3-218ENST00000493430 PANK1Q8TE04 598 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms