RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 SLC35G1Q2M3R5 365 aa18.19■□□□□ 0.5
SEMA4D-220ENST00000492386 NAALADL2Q58DX5 795 aa18.19■□□□□ 0.5
SEMA4D-220ENST00000492386 C12orf60Q5U649 245 aa18.19■□□□□ 0.5
SEMA4D-220ENST00000492386 IRF2BP1Q8IU81 584 aa18.19■□□□□ 0.5
SEMA4D-220ENST00000492386 PNMA1Q8ND90 353 aa18.19■□□□□ 0.5
SEMA4D-220ENST00000492386 NLRP3Q96P20 1036 aa18.19■□□□□ 0.5
SEMA4D-220ENST00000492386 DISC1Q9NRI5 854 aa18.19■□□□□ 0.5
SEMA4D-220ENST00000492386 MAPK8IP1Q9UQF2 711 aa18.19■□□□□ 0.5
SEMA4D-220ENST00000492386 CNTNAP4Q9C0A0 1308 aa18.19■□□□□ 0.5
SEMA4D-220ENST00000492386 ABL1P00519 1130 aa18.19■□□□□ 0.5
SEMA4D-220ENST00000492386 CHMP4BP1P59074 171 aa18.19■□□□□ 0.5
SEMA4D-220ENST00000492386 TRIM14Q14142 442 aa18.19■□□□□ 0.5
SEMA4D-220ENST00000492386 GRM4Q14833 912 aa18.19■□□□□ 0.5
SEMA4D-220ENST00000492386 ARFGAP3Q9NP61 516 aa18.19■□□□□ 0.5
SEMA4D-220ENST00000492386 ARHGAP25P42331 645 aa18.18■□□□□ 0.5
SEMA4D-220ENST00000492386 ADSSL1Q8N142 457 aa18.18■□□□□ 0.5
SEMA4D-220ENST00000492386 ANKRD20A12PQ8NF67 263 aa18.18■□□□□ 0.5
SEMA4D-220ENST00000492386 NUP88Q99567 741 aaPredicted RBP18.18■□□□□ 0.5
SEMA4D-220ENST00000492386 NYXQ9GZU5 481 aa18.18■□□□□ 0.5
SEMA4D-220ENST00000492386 MAD2L2Q9UI95 211 aa18.18■□□□□ 0.5
SEMA4D-220ENST00000492386 SBF2Q86WG5 1849 aa18.18■□□□□ 0.5
SEMA4D-220ENST00000492386 WWC2Q6AWC2 1192 aa18.18■□□□□ 0.5
SEMA4D-220ENST00000492386 CYP26C1Q6V0L0 522 aa18.18■□□□□ 0.5
SEMA4D-220ENST00000492386 DZIP1Q86YF9 867 aaKnown RBP18.18■□□□□ 0.5
SEMA4D-220ENST00000492386 SLC35F6Q8N357 371 aa18.18■□□□□ 0.5
SEMA4D-220ENST00000492386 DYNLL2Q96FJ2 89 aa18.18■□□□□ 0.5
SEMA4D-220ENST00000492386 FUT8Q9BYC5 575 aa18.18■□□□□ 0.5
SEMA4D-220ENST00000492386 TMEM60Q9H2L4 133 aa18.18■□□□□ 0.5
SEMA4D-220ENST00000492386 ZSWIM4Q9H7M6 989 aa18.18■□□□□ 0.5
SEMA4D-220ENST00000492386 PCDHA6Q9UN73 950 aa18.18■□□□□ 0.5
SEMA4D-220ENST00000492386 PCDHA8Q9Y5H6 950 aa18.18■□□□□ 0.5
SEMA4D-220ENST00000492386 MYH1P12882 1939 aa18.18■□□□□ 0.5
SEMA4D-220ENST00000492386 PP2D1A8MPX8 630 aa18.17■□□□□ 0.5
SEMA4D-220ENST00000492386 H7C1D1 291 aa18.17■□□□□ 0.5
SEMA4D-220ENST00000492386 ZBTB22O15209 634 aa18.17■□□□□ 0.5
SEMA4D-220ENST00000492386 JAKMIP3Q5VZ66 844 aa18.17■□□□□ 0.5
SEMA4D-220ENST00000492386 SRP68Q9UHB9 627 aaKnown RBP18.17■□□□□ 0.5
SEMA4D-220ENST00000492386 ROBO3Q96MS0 1386 aa18.17■□□□□ 0.5
SEMA4D-220ENST00000492386 CTAGE9A4FU28 777 aa18.17■□□□□ 0.5
SEMA4D-220ENST00000492386 TRIM49BA6NDI0 452 aa18.17■□□□□ 0.5
SEMA4D-220ENST00000492386 TUBB2AQ13885 445 aa18.17■□□□□ 0.5
SEMA4D-220ENST00000492386 SPTY2D1Q68D10 685 aaPredicted RBP18.17■□□□□ 0.5
SEMA4D-220ENST00000492386 DTHD1Q6ZMT9 781 aa18.17■□□□□ 0.5
SEMA4D-220ENST00000492386 NBPF5PQ86XG9 351 aaPredicted RBP18.17■□□□□ 0.5
SEMA4D-220ENST00000492386 CCDC24Q8N4L8 307 aa18.17■□□□□ 0.5
SEMA4D-220ENST00000492386 CEP112Q8N8E3 955 aa18.17■□□□□ 0.5
SEMA4D-220ENST00000492386 DAGLBQ8NCG7 672 aa18.17■□□□□ 0.5
SEMA4D-220ENST00000492386 SETDB2Q96T68 719 aa18.17■□□□□ 0.5
SEMA4D-220ENST00000492386 TUBB2BQ9BVA1 445 aa18.17■□□□□ 0.5
SEMA4D-220ENST00000492386 ANKZF1Q9H8Y5 726 aa18.17■□□□□ 0.5
SEMA4D-220ENST00000492386 NARFQ9UHQ1 456 aa18.17■□□□□ 0.5
SEMA4D-220ENST00000492386 PUF60Q9UHX1 559 aaKnown RBP18.17■□□□□ 0.5
SEMA4D-220ENST00000492386 CCDC194A0A1B0GVG4 234 aa18.16■□□□□ 0.5
SEMA4D-220ENST00000492386 CCDC151A5D8V7 595 aa18.16■□□□□ 0.5
SEMA4D-220ENST00000492386 CYTH3O43739 400 aa18.16■□□□□ 0.5
SEMA4D-220ENST00000492386 KLRC4O43908 158 aa18.16■□□□□ 0.5
SEMA4D-220ENST00000492386 PARP1P09874 1014 aaKnown RBP18.16■□□□□ 0.5
SEMA4D-220ENST00000492386 TM4SF1P30408 202 aa18.16■□□□□ 0.5
SEMA4D-220ENST00000492386 KRT9P35527 623 aa18.16■□□□□ 0.5
SEMA4D-220ENST00000492386 PMS1P54277 932 aaKnown RBP18.16■□□□□ 0.5
SEMA4D-220ENST00000492386 UBXN1Q04323 297 aa18.16■□□□□ 0.5
SEMA4D-220ENST00000492386 KIF4BQ2VIQ3 1234 aa18.16■□□□□ 0.5
SEMA4D-220ENST00000492386 USP17L3A6NCW0 530 aa18.16■□□□□ 0.5
SEMA4D-220ENST00000492386 USP17L4A6NCW7 530 aa18.16■□□□□ 0.5
SEMA4D-220ENST00000492386 CYP2C19P33261 490 aa18.16■□□□□ 0.5
SEMA4D-220ENST00000492386 NT5C2P49902 561 aa18.16■□□□□ 0.5
SEMA4D-220ENST00000492386 KCNB1Q14721 858 aa18.16■□□□□ 0.5
SEMA4D-220ENST00000492386 BRD3Q15059 726 aa18.16■□□□□ 0.5
SEMA4D-220ENST00000492386 USP17L1Q7RTZ2 530 aa18.16■□□□□ 0.5
SEMA4D-220ENST00000492386 SH3RF3Q8TEJ3 882 aaPredicted RBP18.16■□□□□ 0.5
SEMA4D-220ENST00000492386 NAV1Q8NEY1 1877 aa18.15■□□□□ 0.5
SEMA4D-220ENST00000492386 GNAQP50148 359 aa18.15■□□□□ 0.5
SEMA4D-220ENST00000492386 INF2Q27J81 1249 aa18.15■□□□□ 0.5
SEMA4D-220ENST00000492386 LRRC15Q8TF66 581 aa18.15■□□□□ 0.5
SEMA4D-220ENST00000492386 KBTBD4Q9NVX7 518 aa18.15■□□□□ 0.5
SEMA4D-220ENST00000492386 STXBP3O00186 592 aa18.15■□□□□ 0.5
SEMA4D-220ENST00000492386 TFRCP02786 760 aaKnown RBP18.15■□□□□ 0.5
SEMA4D-220ENST00000492386 USP5P45974 858 aa18.15■□□□□ 0.5
SEMA4D-220ENST00000492386 LONRF2Q1L5Z9 754 aa18.15■□□□□ 0.5
SEMA4D-220ENST00000492386 CHP1Q99653 195 aa18.15■□□□□ 0.5
SEMA4D-220ENST00000492386 SLF1Q9BQI6 1058 aa18.15■□□□□ 0.5
SEMA4D-220ENST00000492386 CCSER1Q9C0I3 900 aa18.15■□□□□ 0.5
SEMA4D-220ENST00000492386 MYO1AQ9UBC5 1043 aa18.15■□□□□ 0.5
SEMA4D-220ENST00000492386 LGALS16A8MUM7 142 aa18.14■□□□□ 0.49
SEMA4D-220ENST00000492386 POLR3GO15318 223 aaPredicted RBP18.14■□□□□ 0.49
SEMA4D-220ENST00000492386 SMC1AQ14683 1233 aaKnown RBP18.14■□□□□ 0.49
SEMA4D-220ENST00000492386 GALNT17Q6IS24 598 aa18.14■□□□□ 0.49
SEMA4D-220ENST00000492386 MB21D1Q8N884 522 aa18.14■□□□□ 0.49
SEMA4D-220ENST00000492386 MSANTD4Q8NCY6 345 aa18.14■□□□□ 0.49
SEMA4D-220ENST00000492386 CCDC148Q8NFR7 591 aa18.14■□□□□ 0.49
SEMA4D-220ENST00000492386 ZNF507Q8TCN5 953 aa18.14■□□□□ 0.49
SEMA4D-220ENST00000492386 NAPGQ99747 312 aaPredicted RBP18.14■□□□□ 0.49
SEMA4D-220ENST00000492386 TCP11L1Q9NUJ3 509 aa18.14■□□□□ 0.49
SEMA4D-220ENST00000492386 BARHL2Q9NY43 387 aa18.14■□□□□ 0.49
SEMA4D-220ENST00000492386 REXO2Q9Y3B8 237 aaKnown RBP18.14■□□□□ 0.49
SEMA4D-220ENST00000492386 TNRC6CQ9HCJ0 1690 aaKnown RBP18.14■□□□□ 0.49
SEMA4D-220ENST00000492386 TTC26A0AVF1 554 aa18.13■□□□□ 0.49
SEMA4D-220ENST00000492386 RHOBTB3O94955 611 aa18.13■□□□□ 0.49
SEMA4D-220ENST00000492386 MYL1P05976 194 aa18.13■□□□□ 0.49
SEMA4D-220ENST00000492386 EEF1GP26641 437 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms