RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 LPIN2Q92539 896 aa14.26□□□□□ -0.13
SHOX2-205ENST00000490689 RBM28Q9NW13 759 aaKnown RBP14.26□□□□□ -0.13
SHOX2-205ENST00000490689 KCNK3O14649 394 aa14.26□□□□□ -0.13
SHOX2-205ENST00000490689 SLC9C1Q4G0N8 1177 aa14.26□□□□□ -0.13
SHOX2-205ENST00000490689 KRT79Q5XKE5 535 aa14.26□□□□□ -0.13
SHOX2-205ENST00000490689 MCTP2Q6DN12 878 aa14.26□□□□□ -0.13
SHOX2-205ENST00000490689 CRACR2BQ8N4Y2 399 aaPredicted RBP14.26□□□□□ -0.13
SHOX2-205ENST00000490689 CCDC172P0C7W6 258 aa14.26□□□□□ -0.13
SHOX2-205ENST00000490689 MCAMP43121 646 aa14.26□□□□□ -0.13
SHOX2-205ENST00000490689 NEDD4P46934 1319 aa14.26□□□□□ -0.13
SHOX2-205ENST00000490689 A0A1B0GUA9 196 aa14.26□□□□□ -0.13
SHOX2-205ENST00000490689 PPP1R12BO60237 982 aaPredicted RBP14.26□□□□□ -0.13
SHOX2-205ENST00000490689 HEXIM1O94992 359 aaKnown RBP14.26□□□□□ -0.13
SHOX2-205ENST00000490689 TCP11X2Q5H9J9 407 aa14.26□□□□□ -0.13
SHOX2-205ENST00000490689 BEND6Q5SZJ8 279 aaPredicted RBP14.26□□□□□ -0.13
SHOX2-205ENST00000490689 KSR1Q8IVT5 923 aa14.26□□□□□ -0.13
SHOX2-205ENST00000490689 SMCR8Q8TEV9 937 aaPredicted RBP14.26□□□□□ -0.13
SHOX2-205ENST00000490689 CNOT6LQ96LI5 555 aaKnown RBP14.26□□□□□ -0.13
SHOX2-205ENST00000490689 NHEJ1Q9H9Q4 299 aaPredicted RBP14.26□□□□□ -0.13
SHOX2-205ENST00000490689 AATFQ9NY61 560 aaKnown RBP eCLIP14.26□□□□□ -0.13
SHOX2-205ENST00000490689 NEBLO76041 1014 aa14.25□□□□□ -0.13
SHOX2-205ENST00000490689 ILDR1Q86SU0 546 aaPredicted RBP14.25□□□□□ -0.13
SHOX2-205ENST00000490689 CABP7Q86V35 215 aa14.25□□□□□ -0.13
SHOX2-205ENST00000490689 CCDC155Q8N6L0 562 aa14.25□□□□□ -0.13
SHOX2-205ENST00000490689 TEX13AQ9BXU3 409 aaPredicted RBP14.25□□□□□ -0.13
SHOX2-205ENST00000490689 KCNK9Q9NPC2 374 aa14.25□□□□□ -0.13
SHOX2-205ENST00000490689 NIP7Q9Y221 180 aaKnown RBP eCLIP14.25□□□□□ -0.13
SHOX2-205ENST00000490689 TCP1P17987 556 aaKnown RBP14.25□□□□□ -0.13
SHOX2-205ENST00000490689 PPP1R7Q15435 360 aa14.25□□□□□ -0.13
SHOX2-205ENST00000490689 IFI16Q16666 785 aaKnown RBP14.25□□□□□ -0.13
SHOX2-205ENST00000490689 DPH5Q9H2P9 285 aa14.25□□□□□ -0.13
SHOX2-205ENST00000490689 GPR108Q9NPR9 543 aa14.25□□□□□ -0.13
SHOX2-205ENST00000490689 NFU1Q9UMS0 254 aa14.25□□□□□ -0.13
SHOX2-205ENST00000490689 ZRANB2O95218 330 aaKnown RBP eCLIP14.25□□□□□ -0.13
SHOX2-205ENST00000490689 FTCDO95954 541 aa14.25□□□□□ -0.13
SHOX2-205ENST00000490689 ANTXR2P58335 489 aa14.25□□□□□ -0.13
SHOX2-205ENST00000490689 NAA35Q5VZE5 725 aa14.25□□□□□ -0.13
SHOX2-205ENST00000490689 KRT26Q7Z3Y9 468 aa14.25□□□□□ -0.13
SHOX2-205ENST00000490689 SAMD15Q9P1V8 674 aa14.25□□□□□ -0.13
SHOX2-205ENST00000490689 FAM184BQ9ULE4 1060 aa14.25□□□□□ -0.13
SHOX2-205ENST00000490689 BUB1BO60566 1050 aaPredicted RBP14.24□□□□□ -0.13
SHOX2-205ENST00000490689 KIF4AO95239 1232 aa14.24□□□□□ -0.13
SHOX2-205ENST00000490689 USP14P54578 494 aa14.24□□□□□ -0.13
SHOX2-205ENST00000490689 KLHL30Q0D2K2 578 aa14.24□□□□□ -0.13
SHOX2-205ENST00000490689 DAAM2Q86T65 1068 aa14.24□□□□□ -0.13
SHOX2-205ENST00000490689 SH2D3CQ8N5H7 860 aa14.24□□□□□ -0.13
SHOX2-205ENST00000490689 COG1Q8WTW3 980 aa14.24□□□□□ -0.13
SHOX2-205ENST00000490689 UBE3CQ15386 1083 aa14.24□□□□□ -0.13
SHOX2-205ENST00000490689 RPS6KA1Q15418 735 aa14.24□□□□□ -0.13
SHOX2-205ENST00000490689 RSRC1Q96IZ7 334 aaKnown RBP14.24□□□□□ -0.13
SHOX2-205ENST00000490689 ZC3H13Q5T200 1668 aaKnown RBP14.24□□□□□ -0.13
SHOX2-205ENST00000490689 A0A0U1RQJ8 604 aa14.24□□□□□ -0.13
SHOX2-205ENST00000490689 CLTAP09496 248 aa14.24□□□□□ -0.13
SHOX2-205ENST00000490689 TECP42680 631 aa14.24□□□□□ -0.13
SHOX2-205ENST00000490689 CCDC93Q567U6 631 aa14.24□□□□□ -0.13
SHOX2-205ENST00000490689 CNNM4Q6P4Q7 775 aa14.24□□□□□ -0.13
SHOX2-205ENST00000490689 LCORLQ8N3X6 602 aa14.24□□□□□ -0.13
SHOX2-205ENST00000490689 ZSCAN10Q96SZ4 725 aaPredicted RBP14.24□□□□□ -0.13
SHOX2-205ENST00000490689 AXIN2Q9Y2T1 843 aa14.24□□□□□ -0.13
SHOX2-205ENST00000490689 INO80Q9ULG1 1556 aaPredicted RBP14.23□□□□□ -0.13
SHOX2-205ENST00000490689 ARID4AP29374 1257 aaPredicted RBP14.23□□□□□ -0.13
SHOX2-205ENST00000490689 ACTN3Q08043 901 aaPredicted RBP14.23□□□□□ -0.13
SHOX2-205ENST00000490689 NR1I3Q14994 352 aa14.23□□□□□ -0.13
SHOX2-205ENST00000490689 FOXP4Q8IVH2 680 aaPredicted RBP14.23□□□□□ -0.13
SHOX2-205ENST00000490689 MLXIPQ9HAP2 919 aa14.23□□□□□ -0.13
SHOX2-205ENST00000490689 C6orf50Q9HD87 102 aa14.23□□□□□ -0.13
SHOX2-205ENST00000490689 HPS5Q9UPZ3 1129 aa14.23□□□□□ -0.13
SHOX2-205ENST00000490689 PDE8BO95263 885 aa14.23□□□□□ -0.13
SHOX2-205ENST00000490689 PLEKHA8P1O95397 391 aa14.23□□□□□ -0.13
SHOX2-205ENST00000490689 GIGYF2Q6Y7W6 1299 aaKnown RBP14.23□□□□□ -0.13
SHOX2-205ENST00000490689 CCDC84Q86UT8 332 aaPredicted RBP14.23□□□□□ -0.13
SHOX2-205ENST00000490689 ZSCAN29Q8IWY8 852 aaPredicted RBP14.23□□□□□ -0.13
SHOX2-205ENST00000490689 SMARCAL1Q9NZC9 954 aa14.23□□□□□ -0.13
SHOX2-205ENST00000490689 LRRIQ3A6PVS8 624 aaPredicted RBP14.23□□□□□ -0.13
SHOX2-205ENST00000490689 EIF4A3P38919 411 aaKnown RBP14.23□□□□□ -0.13
SHOX2-205ENST00000490689 GNAQP50148 359 aa14.23□□□□□ -0.13
SHOX2-205ENST00000490689 EPHB4P54760 987 aa14.23□□□□□ -0.13
SHOX2-205ENST00000490689 ATG9AQ7Z3C6 839 aa14.23□□□□□ -0.13
SHOX2-205ENST00000490689 RIPOR2Q9Y4F9 1068 aa14.23□□□□□ -0.13
SHOX2-205ENST00000490689 SOS2Q07890 1332 aaPredicted RBP14.23□□□□□ -0.13
SHOX2-205ENST00000490689 A0A1B0GTH6 734 aa14.23□□□□□ -0.13
SHOX2-205ENST00000490689 A6NNZ2 444 aa14.23□□□□□ -0.13
SHOX2-205ENST00000490689 NCK2O43639 380 aa14.23□□□□□ -0.13
SHOX2-205ENST00000490689 GOLGA8HP0CJ92 632 aa14.23□□□□□ -0.13
SHOX2-205ENST00000490689 PEX19P40855 299 aa14.23□□□□□ -0.13
SHOX2-205ENST00000490689 TUBB8Q3ZCM7 444 aa14.23□□□□□ -0.13
SHOX2-205ENST00000490689 MB21D1Q8N884 522 aa14.23□□□□□ -0.13
SHOX2-205ENST00000490689 MGARPQ8TDB4 240 aa14.23□□□□□ -0.13
SHOX2-205ENST00000490689 LRRC45Q96CN5 670 aa14.23□□□□□ -0.13
SHOX2-205ENST00000490689 SAP30BPQ9UHR5 308 aaKnown RBP14.23□□□□□ -0.13
SHOX2-205ENST00000490689 L1RE1Q9UN81 338 aa14.23□□□□□ -0.13
SHOX2-205ENST00000490689 NRKQ7Z2Y5 1582 aa14.22□□□□□ -0.13
SHOX2-205ENST00000490689 BACH1O14867 736 aa14.22□□□□□ -0.13
SHOX2-205ENST00000490689 PRCPP42785 496 aa14.22□□□□□ -0.13
SHOX2-205ENST00000490689 RUFY4Q6ZNE9 571 aa14.22□□□□□ -0.13
SHOX2-205ENST00000490689 CACNA2D3Q8IZS8 1091 aa14.22□□□□□ -0.13
SHOX2-205ENST00000490689 TAOK3Q9H2K8 898 aa14.22□□□□□ -0.13
SHOX2-205ENST00000490689 LY9Q9HBG7 655 aa14.22□□□□□ -0.13
SHOX2-205ENST00000490689 RWDD2AQ9UIY3 292 aa14.22□□□□□ -0.13
SHOX2-205ENST00000490689 H7C1W4 665 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms