RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 SLC1A4P43007 532 aa21.4■■□□□ 1.02
COL9A3-214ENST00000490398 CPXCR1Q8N123 301 aa21.4■■□□□ 1.02
COL9A3-214ENST00000490398 SLC38A10Q9HBR0 1119 aa21.4■■□□□ 1.02
COL9A3-214ENST00000490398 RAVER2Q9HCJ3 691 aaKnown RBP21.4■■□□□ 1.02
COL9A3-214ENST00000490398 LAMA4Q16363 1823 aa21.39■■□□□ 1.02
COL9A3-214ENST00000490398 RPTORQ8N122 1335 aa21.39■■□□□ 1.01
COL9A3-214ENST00000490398 B4E1Z4 1266 aa21.39■■□□□ 1.01
COL9A3-214ENST00000490398 KDM4AO75164 1064 aa21.39■■□□□ 1.01
COL9A3-214ENST00000490398 CYP2C19P33261 490 aa21.39■■□□□ 1.01
COL9A3-214ENST00000490398 SLC4A3P48751 1232 aa21.39■■□□□ 1.01
COL9A3-214ENST00000490398 TTBK2Q6IQ55 1244 aa21.39■■□□□ 1.01
COL9A3-214ENST00000490398 RNF41Q9H4P4 317 aaPredicted RBP21.39■■□□□ 1.01
COL9A3-214ENST00000490398 SLC25A27O95847 323 aa21.38■■□□□ 1.01
COL9A3-214ENST00000490398 PGK2P07205 417 aa21.38■■□□□ 1.01
COL9A3-214ENST00000490398 TOP1P11387 765 aaKnown RBP21.38■■□□□ 1.01
COL9A3-214ENST00000490398 PCP11498 1178 aaKnown RBP21.38■■□□□ 1.01
COL9A3-214ENST00000490398 TAL1P17542 331 aaPredicted RBP21.38■■□□□ 1.01
COL9A3-214ENST00000490398 IMMTQ16891 758 aaKnown RBP21.38■■□□□ 1.01
COL9A3-214ENST00000490398 SNRNP48Q6IEG0 339 aaKnown RBP21.38■■□□□ 1.01
COL9A3-214ENST00000490398 UBE2Q1Q7Z7E8 422 aa21.38■■□□□ 1.01
COL9A3-214ENST00000490398 DPP9Q86TI2 863 aa21.38■■□□□ 1.01
COL9A3-214ENST00000490398 TRPV1Q8NER1 839 aa21.38■■□□□ 1.01
COL9A3-214ENST00000490398 ESR2Q92731 530 aa21.38■■□□□ 1.01
COL9A3-214ENST00000490398 CRISPLD2Q9H0B8 497 aa21.38■■□□□ 1.01
COL9A3-214ENST00000490398 HMX1Q9NP08 348 aaPredicted RBP21.38■■□□□ 1.01
COL9A3-214ENST00000490398 CTNNA3Q9UI47 895 aa21.38■■□□□ 1.01
COL9A3-214ENST00000490398 FRMPD2Q68DX3 1309 aaPredicted RBP21.37■■□□□ 1.01
COL9A3-214ENST00000490398 STRNO43815 780 aa21.37■■□□□ 1.01
COL9A3-214ENST00000490398 ZBED4O75132 1171 aa21.37■■□□□ 1.01
COL9A3-214ENST00000490398 STAT2P52630 851 aa21.37■■□□□ 1.01
COL9A3-214ENST00000490398 PPP4R3BQ5MIZ7 849 aa21.37■■□□□ 1.01
COL9A3-214ENST00000490398 RUFY2Q8WXA3 655 aa21.37■■□□□ 1.01
COL9A3-214ENST00000490398 TEX13BQ9BXU2 312 aa21.37■■□□□ 1.01
COL9A3-214ENST00000490398 ZSWIM5Q9P217 1185 aa21.37■■□□□ 1.01
COL9A3-214ENST00000490398 ZNF536O15090 1300 aa21.36■■□□□ 1.01
COL9A3-214ENST00000490398 TFRCP02786 760 aaKnown RBP21.36■■□□□ 1.01
COL9A3-214ENST00000490398 CYP21A2P08686 494 aa21.36■■□□□ 1.01
COL9A3-214ENST00000490398 FCER1AP12319 257 aa21.36■■□□□ 1.01
COL9A3-214ENST00000490398 SLC16A2P36021 539 aa21.36■■□□□ 1.01
COL9A3-214ENST00000490398 TRMT44Q8IYL2 757 aaKnown RBP21.36■■□□□ 1.01
COL9A3-214ENST00000490398 ABRAQ8N0Z2 381 aa21.36■■□□□ 1.01
COL9A3-214ENST00000490398 CCDC136Q96JN2 1154 aa21.36■■□□□ 1.01
COL9A3-214ENST00000490398 MMP19Q99542 508 aa21.36■■□□□ 1.01
COL9A3-214ENST00000490398 GPCPD1Q9NPB8 672 aa21.36■■□□□ 1.01
COL9A3-214ENST00000490398 PRR12Q9ULL5 1215 aa21.36■■□□□ 1.01
COL9A3-214ENST00000490398 ZNF236Q9UL36 1845 aa21.36■■□□□ 1.01
COL9A3-214ENST00000490398 ATP2A1O14983 1001 aa21.35■■□□□ 1.01
COL9A3-214ENST00000490398 MNX1P50219 401 aaPredicted RBP21.35■■□□□ 1.01
COL9A3-214ENST00000490398 IKQ13123 557 aaPredicted RBP21.35■■□□□ 1.01
COL9A3-214ENST00000490398 CCDC96Q2M329 555 aa21.35■■□□□ 1.01
COL9A3-214ENST00000490398 CYB5R4Q7L1T6 521 aa21.35■■□□□ 1.01
COL9A3-214ENST00000490398 DIS3LQ8TF46 1054 aaKnown RBP21.35■■□□□ 1.01
COL9A3-214ENST00000490398 DCAF4Q8WV16 495 aa21.35■■□□□ 1.01
COL9A3-214ENST00000490398 AGBL1Q96MI9 1066 aa21.35■■□□□ 1.01
COL9A3-214ENST00000490398 PDE4DIPQ5VU43 2346 aa21.34■■□□□ 1.01
COL9A3-214ENST00000490398 PDHBP11177 359 aa21.34■■□□□ 1.01
COL9A3-214ENST00000490398 PRAMEF19Q5SWL8 479 aa21.34■■□□□ 1.01
COL9A3-214ENST00000490398 LHX8Q68G74 356 aa21.34■■□□□ 1.01
COL9A3-214ENST00000490398 STOX1Q6ZVD7 989 aa21.34■■□□□ 1.01
COL9A3-214ENST00000490398 FAM160B2Q86V87 743 aa21.34■■□□□ 1.01
COL9A3-214ENST00000490398 CHURC1Q8WUH1 139 aa21.34■■□□□ 1.01
COL9A3-214ENST00000490398 MAML3Q96JK9 1138 aa21.34■■□□□ 1.01
COL9A3-214ENST00000490398 TTC14Q96N46 770 aa21.34■■□□□ 1.01
COL9A3-214ENST00000490398 PLA2G6O60733 806 aa21.33■■□□□ 1.01
COL9A3-214ENST00000490398 KCTD2Q14681 263 aa21.33■■□□□ 1.01
COL9A3-214ENST00000490398 ZNF792Q3KQV3 632 aa21.33■■□□□ 1.01
COL9A3-214ENST00000490398 BMP2KLQ5H9B9 411 aa21.33■■□□□ 1.01
COL9A3-214ENST00000490398 MFSD14CQ5VZR4 134 aa21.33■■□□□ 1.01
COL9A3-214ENST00000490398 OLFML2BQ68BL8 750 aa21.33■■□□□ 1.01
COL9A3-214ENST00000490398 CCDC174Q6PII3 467 aa21.33■■□□□ 1.01
COL9A3-214ENST00000490398 ENAHQ8N8S7 591 aaPredicted RBP21.33■■□□□ 1.01
COL9A3-214ENST00000490398 MAP4K1Q92918 833 aa21.33■■□□□ 1.01
COL9A3-214ENST00000490398 ZSCAN10Q96SZ4 725 aaPredicted RBP21.33■■□□□ 1.01
COL9A3-214ENST00000490398 ESYT1Q9BSJ8 1104 aa21.33■■□□□ 1.01
COL9A3-214ENST00000490398 LSG1Q9H089 658 aaKnown RBP21.33■■□□□ 1.01
COL9A3-214ENST00000490398 CPVLQ9H3G5 476 aa21.33■■□□□ 1.01
COL9A3-214ENST00000490398 CTDP1Q9Y5B0 961 aaPredicted RBP21.33■■□□□ 1.01
COL9A3-214ENST00000490398 FARP2O94887 1054 aaPredicted RBP21.32■■□□□ 1
COL9A3-214ENST00000490398 GOLGA8HP0CJ92 632 aa21.32■■□□□ 1
COL9A3-214ENST00000490398 SNHG28P0DPA3 235 aa21.32■■□□□ 1
COL9A3-214ENST00000490398 COL9A3Q14050 684 aaPredicted RBP21.32■■□□□ 1
COL9A3-214ENST00000490398 DGKHQ86XP1 1220 aa21.32■■□□□ 1
COL9A3-214ENST00000490398 ANKS1AQ92625 1134 aa21.32■■□□□ 1
COL9A3-214ENST00000490398 HOMER2Q9NSB8 354 aa21.32■■□□□ 1
COL9A3-214ENST00000490398 RBM8AQ9Y5S9 174 aaKnown RBP21.32■■□□□ 1
COL9A3-214ENST00000490398 U3KPZ7 1027 aaPredicted RBP21.32■■□□□ 1
COL9A3-214ENST00000490398 TNKSO95271 1327 aa21.31■■□□□ 1
COL9A3-214ENST00000490398 CYBAP13498 195 aa21.31■■□□□ 1
COL9A3-214ENST00000490398 OAZ1P54368 228 aa21.31■■□□□ 1
COL9A3-214ENST00000490398 BTNL9Q6UXG8 535 aa21.31■■□□□ 1
COL9A3-214ENST00000490398 PAWRQ96IZ0 340 aaKnown RBP21.31■■□□□ 1
COL9A3-214ENST00000490398 KRT23Q9C075 422 aa21.31■■□□□ 1
COL9A3-214ENST00000490398 OGDHLQ9ULD0 1010 aa21.31■■□□□ 1
COL9A3-214ENST00000490398 E7EWF7 191 aa21.3■■□□□ 1
COL9A3-214ENST00000490398 COPB2P35606 906 aa21.3■■□□□ 1
COL9A3-214ENST00000490398 ZNF543Q08ER8 600 aa21.3■■□□□ 1
COL9A3-214ENST00000490398 SYDE2Q5VT97 1194 aa21.3■■□□□ 1
COL9A3-214ENST00000490398 IQCA1Q86XH1 822 aa21.3■■□□□ 1
COL9A3-214ENST00000490398 PNMA1Q8ND90 353 aa21.3■■□□□ 1
COL9A3-214ENST00000490398 FGD4Q96M96 766 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms