RNA–Protein interactions for RNA: ENST00000489469.5

SMIM11A-206, Transcript of small integral membrane protein 11A, humanhuman

TSL 2

Gene SMIM11A, Length 780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-206ENST00000489469 CALM3P0DP25 149 aa18.1■□□□□ 0.49
SMIM11A-206ENST00000489469 CCNA1P78396 465 aa18.1■□□□□ 0.49
SMIM11A-206ENST00000489469 KCTD1Q719H9 257 aa18.1■□□□□ 0.49
SMIM11A-206ENST00000489469 RUFY3Q7L099 469 aa18.1■□□□□ 0.49
SMIM11A-206ENST00000489469 SGMS1Q86VZ5 419 aa18.1■□□□□ 0.49
SMIM11A-206ENST00000489469 GPRC5AQ8NFJ5 357 aa18.1■□□□□ 0.49
SMIM11A-206ENST00000489469 MAP3K14Q99558 947 aa18.1■□□□□ 0.49
SMIM11A-206ENST00000489469 RBPJLQ9UBG7 517 aa18.1■□□□□ 0.49
SMIM11A-206ENST00000489469 DOCK3Q8IZD9 2030 aa18.1■□□□□ 0.49
SMIM11A-206ENST00000489469 ERVK-9P63128 1117 aa18.09■□□□□ 0.49
SMIM11A-206ENST00000489469 ERVK-24P63145 666 aa18.09■□□□□ 0.49
SMIM11A-206ENST00000489469 BTNL9Q6UXG8 535 aa18.09■□□□□ 0.49
SMIM11A-206ENST00000489469 SYNE3Q6ZMZ3 975 aa18.09■□□□□ 0.49
SMIM11A-206ENST00000489469 ZNF654Q8IZM8 581 aa18.09■□□□□ 0.49
SMIM11A-206ENST00000489469 ATG4CQ96DT6 458 aa18.09■□□□□ 0.49
SMIM11A-206ENST00000489469 PAGR1Q9BTK6 254 aa18.09■□□□□ 0.49
SMIM11A-206ENST00000489469 FBXO28Q9NVF7 368 aa18.09■□□□□ 0.49
SMIM11A-206ENST00000489469 CTDP1Q9Y5B0 961 aaPredicted RBP18.09■□□□□ 0.49
SMIM11A-206ENST00000489469 SLC12A7Q9Y666 1083 aa18.09■□□□□ 0.49
SMIM11A-206ENST00000489469 FRMPD2Q68DX3 1309 aaPredicted RBP18.08■□□□□ 0.49
SMIM11A-206ENST00000489469 VWA5AO00534 786 aa18.08■□□□□ 0.48
SMIM11A-206ENST00000489469 ZBED4O75132 1171 aa18.08■□□□□ 0.48
SMIM11A-206ENST00000489469 KIF5BP33176 963 aa18.08■□□□□ 0.48
SMIM11A-206ENST00000489469 LACTBP83111 547 aaPredicted RBP18.08■□□□□ 0.48
SMIM11A-206ENST00000489469 TROAPQ12815 778 aa18.08■□□□□ 0.48
SMIM11A-206ENST00000489469 KIFC2Q96AC6 838 aa18.08■□□□□ 0.48
SMIM11A-206ENST00000489469 LRRC2Q9BYS8 371 aa18.08■□□□□ 0.48
SMIM11A-206ENST00000489469 C22orf23Q9BZE7 217 aa18.08■□□□□ 0.48
SMIM11A-206ENST00000489469 GNRH1P01148 92 aa18.07■□□□□ 0.48
SMIM11A-206ENST00000489469 COPB2P35606 906 aa18.07■□□□□ 0.48
SMIM11A-206ENST00000489469 RCAN1P53805 252 aa18.07■□□□□ 0.48
SMIM11A-206ENST00000489469 OAZ1P54368 228 aa18.07■□□□□ 0.48
SMIM11A-206ENST00000489469 COL9A3Q14050 684 aaPredicted RBP18.07■□□□□ 0.48
SMIM11A-206ENST00000489469 GRM4Q14833 912 aa18.07■□□□□ 0.48
SMIM11A-206ENST00000489469 Q6ZUG5 572 aa18.07■□□□□ 0.48
SMIM11A-206ENST00000489469 CTCFLQ8NI51 663 aaPredicted RBP18.07■□□□□ 0.48
SMIM11A-206ENST00000489469 TCEANC2Q96MN5 208 aa18.07■□□□□ 0.48
SMIM11A-206ENST00000489469 AGXT2Q9BYV1 514 aa18.07■□□□□ 0.48
SMIM11A-206ENST00000489469 SENP2Q9HC62 589 aa18.07■□□□□ 0.48
SMIM11A-206ENST00000489469 TXNRD2Q9NNW7 524 aa18.07■□□□□ 0.48
SMIM11A-206ENST00000489469 GPCPD1Q9NPB8 672 aa18.07■□□□□ 0.48
SMIM11A-206ENST00000489469 PNMA2Q9UL42 364 aa18.07■□□□□ 0.48
SMIM11A-206ENST00000489469 BAZ2BQ9UIF8 2168 aaKnown RBP18.07■□□□□ 0.48
SMIM11A-206ENST00000489469 CPA1P15085 419 aa18.06■□□□□ 0.48
SMIM11A-206ENST00000489469 MAPK4P31152 587 aa18.06■□□□□ 0.48
SMIM11A-206ENST00000489469 RBM25P49756 843 aaKnown RBP18.06■□□□□ 0.48
SMIM11A-206ENST00000489469 FCGRTP55899 365 aa18.06■□□□□ 0.48
SMIM11A-206ENST00000489469 SYDE2Q5VT97 1194 aa18.06■□□□□ 0.48
SMIM11A-206ENST00000489469 RASGRP2Q7LDG7 609 aa18.06■□□□□ 0.48
SMIM11A-206ENST00000489469 CCAR1Q8IX12 1150 aaKnown RBP18.06■□□□□ 0.48
SMIM11A-206ENST00000489469 CHMP4CQ96CF2 233 aa18.06■□□□□ 0.48
SMIM11A-206ENST00000489469 BACH2Q9BYV9 841 aa18.06■□□□□ 0.48
SMIM11A-206ENST00000489469 SPATC1LQ9H0A9 340 aa18.06■□□□□ 0.48
SMIM11A-206ENST00000489469 SLC38A10Q9HBR0 1119 aa18.06■□□□□ 0.48
SMIM11A-206ENST00000489469 GPHNQ9NQX3 736 aaPredicted RBP18.06■□□□□ 0.48
SMIM11A-206ENST00000489469 BTBD7Q9P203 1132 aa18.06■□□□□ 0.48
SMIM11A-206ENST00000489469 PRR12Q9ULL5 1215 aa18.06■□□□□ 0.48
SMIM11A-206ENST00000489469 PALM3A6NDB9 673 aaPredicted RBP18.05■□□□□ 0.48
SMIM11A-206ENST00000489469 ATP2A1O14983 1001 aa18.05■□□□□ 0.48
SMIM11A-206ENST00000489469 CNMDO75829 334 aa18.05■□□□□ 0.48
SMIM11A-206ENST00000489469 SLC25A27O95847 323 aa18.05■□□□□ 0.48
SMIM11A-206ENST00000489469 GNAQP50148 359 aa18.05■□□□□ 0.48
SMIM11A-206ENST00000489469 PPP2R5BQ15173 497 aa18.05■□□□□ 0.48
SMIM11A-206ENST00000489469 APOA5Q6Q788 366 aa18.05■□□□□ 0.48
SMIM11A-206ENST00000489469 SHCBP1Q8NEM2 672 aa18.05■□□□□ 0.48
SMIM11A-206ENST00000489469 IL27Q8NEV9 243 aa18.05■□□□□ 0.48
SMIM11A-206ENST00000489469 CD99L2Q8TCZ2 262 aa18.05■□□□□ 0.48
SMIM11A-206ENST00000489469 NUP133Q8WUM0 1156 aa18.05■□□□□ 0.48
SMIM11A-206ENST00000489469 UPF3BQ9BZI7 483 aaKnown RBP18.05■□□□□ 0.48
SMIM11A-206ENST00000489469 PDRG1Q9NUG6 133 aa18.05■□□□□ 0.48
SMIM11A-206ENST00000489469 MAD2L2Q9UI95 211 aa18.05■□□□□ 0.48
SMIM11A-206ENST00000489469 ZNFX1Q9P2E3 1918 aaKnown RBP18.05■□□□□ 0.48
SMIM11A-206ENST00000489469 KLRF2D3W0D1 207 aa18.04■□□□□ 0.48
SMIM11A-206ENST00000489469 ZBTB43O43298 467 aa18.04■□□□□ 0.48
SMIM11A-206ENST00000489469 GOLGA8HP0CJ92 632 aa18.04■□□□□ 0.48
SMIM11A-206ENST00000489469 HOXD10P28358 340 aa18.04■□□□□ 0.48
SMIM11A-206ENST00000489469 PSMC4P43686 418 aa18.04■□□□□ 0.48
SMIM11A-206ENST00000489469 PLS1Q14651 629 aa18.04■□□□□ 0.48
SMIM11A-206ENST00000489469 TMEM132BQ14DG7 1078 aa18.04■□□□□ 0.48
SMIM11A-206ENST00000489469 ANKRD1Q15327 319 aa18.04■□□□□ 0.48
SMIM11A-206ENST00000489469 TTBK2Q6IQ55 1244 aa18.04■□□□□ 0.48
SMIM11A-206ENST00000489469 POTEEQ6S8J3 1075 aa18.04■□□□□ 0.48
SMIM11A-206ENST00000489469 REPS2Q8NFH8 660 aa18.04■□□□□ 0.48
SMIM11A-206ENST00000489469 BRF1Q92994 677 aa18.04■□□□□ 0.48
SMIM11A-206ENST00000489469 LZTS2Q9BRK4 669 aa18.04■□□□□ 0.48
SMIM11A-206ENST00000489469 TEX13BQ9BXU2 312 aa18.04■□□□□ 0.48
SMIM11A-206ENST00000489469 ALDH8A1Q9H2A2 487 aaPredicted RBP18.04■□□□□ 0.48
SMIM11A-206ENST00000489469 ZNF214Q9UL59 606 aaPredicted RBP18.04■□□□□ 0.48
SMIM11A-206ENST00000489469 PLXNB2O15031 1838 aa18.04■□□□□ 0.48
SMIM11A-206ENST00000489469 ZSWIM8A7E2V4 1837 aa18.03■□□□□ 0.48
SMIM11A-206ENST00000489469 KLF18A0A0U1RQI7 1052 aa18.03■□□□□ 0.48
SMIM11A-206ENST00000489469 TNPO2O14787 897 aaKnown RBP18.03■□□□□ 0.48
SMIM11A-206ENST00000489469 FMNL1O95466 1100 aaPredicted RBP18.03■□□□□ 0.48
SMIM11A-206ENST00000489469 SMARCA1P28370 1054 aa18.03■□□□□ 0.48
SMIM11A-206ENST00000489469 SLC16A2P36021 539 aa18.03■□□□□ 0.48
SMIM11A-206ENST00000489469 STAT3P40763 770 aa18.03■□□□□ 0.48
SMIM11A-206ENST00000489469 FXR2P51116 673 aaKnown RBP eCLIP18.03■□□□□ 0.48
SMIM11A-206ENST00000489469 PRMT2P55345 433 aa18.03■□□□□ 0.48
SMIM11A-206ENST00000489469 Q3C1V9 767 aa18.03■□□□□ 0.48
SMIM11A-206ENST00000489469 CTU1Q7Z7A3 348 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms