RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 HAUS7Q99871 368 aa6.07□□□□□ -1.44
RFC4-213ENST00000489028 PHAXQ9H814 394 aaKnown RBP6.07□□□□□ -1.44
RFC4-213ENST00000489028 SUSD2Q9UGT4 822 aa6.07□□□□□ -1.44
RFC4-213ENST00000489028 KRTAP9-6A0A140TA67 174 aa6.06□□□□□ -1.44
RFC4-213ENST00000489028 SMAD7O15105 426 aaKnown RBP6.06□□□□□ -1.44
RFC4-213ENST00000489028 ZNF205O95201 554 aa6.06□□□□□ -1.44
RFC4-213ENST00000489028 GLI1P08151 1106 aa6.06□□□□□ -1.44
RFC4-213ENST00000489028 BMP8BP34820 402 aa6.06□□□□□ -1.44
RFC4-213ENST00000489028 RTP2Q5QGT7 225 aa6.06□□□□□ -1.44
RFC4-213ENST00000489028 MCF2L2Q86YR7 1114 aa6.06□□□□□ -1.44
RFC4-213ENST00000489028 ABHD4Q8TB40 342 aa6.06□□□□□ -1.44
RFC4-213ENST00000489028 MYLIPQ8WY64 445 aa6.06□□□□□ -1.44
RFC4-213ENST00000489028 RNF32Q9H0A6 362 aa6.06□□□□□ -1.44
RFC4-213ENST00000489028 KLHL25Q9H0H3 589 aa6.06□□□□□ -1.44
RFC4-213ENST00000489028 FHOD1Q9Y613 1164 aa6.06□□□□□ -1.44
RFC4-213ENST00000489028 USP2O75604 605 aaPredicted RBP6.05□□□□□ -1.44
RFC4-213ENST00000489028 EPHX1P07099 455 aa6.05□□□□□ -1.44
RFC4-213ENST00000489028 RAC2P15153 192 aa6.05□□□□□ -1.44
RFC4-213ENST00000489028 VAV1P15498 845 aa6.05□□□□□ -1.44
RFC4-213ENST00000489028 ETFBP38117 255 aa6.05□□□□□ -1.44
RFC4-213ENST00000489028 GALK1P51570 392 aa6.05□□□□□ -1.44
RFC4-213ENST00000489028 SLC7A5Q01650 507 aa6.05□□□□□ -1.44
RFC4-213ENST00000489028 FIBCD1Q8N539 461 aa6.05□□□□□ -1.44
RFC4-213ENST00000489028 DHX38Q92620 1227 aaKnown RBP6.05□□□□□ -1.44
RFC4-213ENST00000489028 MAP6Q96JE9 813 aa6.05□□□□□ -1.44
RFC4-213ENST00000489028 HHIPL1Q96JK4 782 aa6.05□□□□□ -1.44
RFC4-213ENST00000489028 KRTAP4-12Q9BQ66 201 aa6.05□□□□□ -1.44
RFC4-213ENST00000489028 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.05□□□□□ -1.44
RFC4-213ENST00000489028 DSCC1Q9BVC3 393 aa6.05□□□□□ -1.44
RFC4-213ENST00000489028 SLC12A7Q9Y666 1083 aa6.05□□□□□ -1.44
RFC4-213ENST00000489028 SSU72P8A0A1W2PR75 194 aa6.04□□□□□ -1.44
RFC4-213ENST00000489028 GSNP06396 782 aa6.04□□□□□ -1.44
RFC4-213ENST00000489028 NR0B2Q15466 257 aa6.04□□□□□ -1.44
RFC4-213ENST00000489028 TMEM67Q5HYA8 995 aa6.04□□□□□ -1.44
RFC4-213ENST00000489028 VPS37DQ86XT2 251 aa6.04□□□□□ -1.44
RFC4-213ENST00000489028 ZNF513Q8N8E2 541 aaPredicted RBP6.04□□□□□ -1.44
RFC4-213ENST00000489028 ADCY4Q8NFM4 1077 aa6.04□□□□□ -1.44
RFC4-213ENST00000489028 SHISA4Q96DD7 197 aa6.04□□□□□ -1.44
RFC4-213ENST00000489028 FGD4Q96M96 766 aa6.04□□□□□ -1.44
RFC4-213ENST00000489028 SLC12A9Q9BXP2 914 aa6.04□□□□□ -1.44
RFC4-213ENST00000489028 NOL6Q9H6R4 1146 aaKnown RBP6.04□□□□□ -1.44
RFC4-213ENST00000489028 AP5S1Q9NUS5 200 aa6.04□□□□□ -1.44
RFC4-213ENST00000489028 ERVK13-1Q9NX77 482 aa6.04□□□□□ -1.44
RFC4-213ENST00000489028 ZMYM5Q9UJ78 669 aa6.04□□□□□ -1.44
RFC4-213ENST00000489028 FITM1A5D6W6 292 aa6.03□□□□□ -1.44
RFC4-213ENST00000489028 PSPNO60542 156 aa6.03□□□□□ -1.44
RFC4-213ENST00000489028 SSBP05455 408 aaKnown RBP eCLIP6.03□□□□□ -1.44
RFC4-213ENST00000489028 ITGA4P13612 1032 aa6.03□□□□□ -1.44
RFC4-213ENST00000489028 DNAJA1P31689 397 aaKnown RBP6.03□□□□□ -1.44
RFC4-213ENST00000489028 ARID5AQ03989 594 aa6.03□□□□□ -1.44
RFC4-213ENST00000489028 DUSP4Q13115 394 aa6.03□□□□□ -1.44
RFC4-213ENST00000489028 GNL2Q13823 731 aaKnown RBP6.03□□□□□ -1.44
RFC4-213ENST00000489028 MLANAQ16655 118 aa6.03□□□□□ -1.44
RFC4-213ENST00000489028 NOL9Q5SY16 702 aaKnown RBP6.03□□□□□ -1.44
RFC4-213ENST00000489028 KIAA1211LQ6NV74 962 aa6.03□□□□□ -1.44
RFC4-213ENST00000489028 VHLLQ6RSH7 139 aa6.03□□□□□ -1.44
RFC4-213ENST00000489028 PRR23BQ6ZRT6 265 aa6.03□□□□□ -1.44
RFC4-213ENST00000489028 KRTAP19-1Q8IUB9 90 aa6.03□□□□□ -1.44
RFC4-213ENST00000489028 ANKS4BQ8N8V4 417 aa6.03□□□□□ -1.44
RFC4-213ENST00000489028 SLC43A3Q8NBI5 491 aa6.03□□□□□ -1.44
RFC4-213ENST00000489028 TMEM52Q8NDY8 209 aa6.03□□□□□ -1.44
RFC4-213ENST00000489028 FCRL2Q96LA5 508 aaPredicted RBP6.03□□□□□ -1.44
RFC4-213ENST00000489028 MCMBPQ9BTE3 642 aa6.03□□□□□ -1.44
RFC4-213ENST00000489028 ZNF408Q9H9D4 720 aa6.03□□□□□ -1.44
RFC4-213ENST00000489028 KCNK12Q9HB15 430 aa6.03□□□□□ -1.44
RFC4-213ENST00000489028 LRRC10BA6NIK2 292 aa6.02□□□□□ -1.45
RFC4-213ENST00000489028 FADS2P1A8MWK0 482 aa6.02□□□□□ -1.45
RFC4-213ENST00000489028 B2RBV5 119 aa6.02□□□□□ -1.45
RFC4-213ENST00000489028 IFNGR1P15260 489 aa6.02□□□□□ -1.45
RFC4-213ENST00000489028 CHRNEQ04844 493 aa6.02□□□□□ -1.45
RFC4-213ENST00000489028 MESP2Q0VG99 397 aa6.02□□□□□ -1.45
RFC4-213ENST00000489028 PPP2R5DQ14738 602 aa6.02□□□□□ -1.45
RFC4-213ENST00000489028 KIR3DS1Q14943 382 aa6.02□□□□□ -1.45
RFC4-213ENST00000489028 ZNF648Q5T619 568 aaPredicted RBP6.02□□□□□ -1.45
RFC4-213ENST00000489028 HEATR6Q6AI08 1181 aaKnown RBP6.02□□□□□ -1.45
RFC4-213ENST00000489028 OXR1Q8N573 874 aa6.02□□□□□ -1.45
RFC4-213ENST00000489028 POU5F2Q8N7G0 328 aa6.02□□□□□ -1.45
RFC4-213ENST00000489028 MICAL1Q8TDZ2 1067 aa6.02□□□□□ -1.45
RFC4-213ENST00000489028 ZDHHC15Q96MV8 337 aa6.02□□□□□ -1.45
RFC4-213ENST00000489028 GMLQ99445 158 aa6.02□□□□□ -1.45
RFC4-213ENST00000489028 PLCD4Q9BRC7 762 aa6.02□□□□□ -1.45
RFC4-213ENST00000489028 CDADC1Q9BWV3 514 aa6.02□□□□□ -1.45
RFC4-213ENST00000489028 WHRNQ9P202 907 aa6.02□□□□□ -1.45
RFC4-213ENST00000489028 APEX2Q9UBZ4 518 aa6.02□□□□□ -1.45
RFC4-213ENST00000489028 PRKAG3Q9UGI9 489 aa6.02□□□□□ -1.45
RFC4-213ENST00000489028 GPR55Q9Y2T6 319 aaPredicted RBP6.02□□□□□ -1.45
RFC4-213ENST00000489028 A0A087WZG4 1122 aa6.01□□□□□ -1.45
RFC4-213ENST00000489028 GSTM1P09488 218 aa6.01□□□□□ -1.45
RFC4-213ENST00000489028 TXKP42681 527 aa6.01□□□□□ -1.45
RFC4-213ENST00000489028 KIR2DL1P43626 348 aaPredicted RBP6.01□□□□□ -1.45
RFC4-213ENST00000489028 KIR2DL2P43627 348 aaPredicted RBP6.01□□□□□ -1.45
RFC4-213ENST00000489028 TCEAL1Q15170 157 aa6.01□□□□□ -1.45
RFC4-213ENST00000489028 C6orf15Q6UXA7 325 aaPredicted RBP6.01□□□□□ -1.45
RFC4-213ENST00000489028 CEP128Q6ZU80 1094 aa6.01□□□□□ -1.45
RFC4-213ENST00000489028 NLRX1Q86UT6 975 aa6.01□□□□□ -1.45
RFC4-213ENST00000489028 LILRA2Q8N149 483 aa6.01□□□□□ -1.45
RFC4-213ENST00000489028 SYTL4Q96C24 671 aaPredicted RBP6.01□□□□□ -1.45
RFC4-213ENST00000489028 FCRL3Q96P31 734 aaPredicted RBP6.01□□□□□ -1.45
RFC4-213ENST00000489028 LGR4Q9BXB1 951 aa6.01□□□□□ -1.45
RFC4-213ENST00000489028 ACTR10Q9NZ32 417 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms