RNA–Protein interactions for RNA: ENST00000488639.6

CEACAM1-212, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 3

Gene CEACAM1, Length 429 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-212ENST00000488639 GNAQP50148 359 aa13.67□□□□□ -0.22
CEACAM1-212ENST00000488639 HERVK_113P62684 666 aa13.67□□□□□ -0.22
CEACAM1-212ENST00000488639 GRM4Q14833 912 aa13.67□□□□□ -0.22
CEACAM1-212ENST00000488639 FAM83BQ5T0W9 1011 aa13.67□□□□□ -0.22
CEACAM1-212ENST00000488639 SMCR8Q8TEV9 937 aaPredicted RBP13.67□□□□□ -0.22
CEACAM1-212ENST00000488639 SLF1Q9BQI6 1058 aa13.67□□□□□ -0.22
CEACAM1-212ENST00000488639 LZTS2Q9BRK4 669 aa13.67□□□□□ -0.22
CEACAM1-212ENST00000488639 UPF3BQ9BZI7 483 aaKnown RBP13.67□□□□□ -0.22
CEACAM1-212ENST00000488639 RNF186Q9NXI6 227 aa13.67□□□□□ -0.22
CEACAM1-212ENST00000488639 PPP1R9AQ9ULJ8 1098 aa13.67□□□□□ -0.22
CEACAM1-212ENST00000488639 ADAMTS5Q9UNA0 930 aa13.67□□□□□ -0.22
CEACAM1-212ENST00000488639 NID2Q14112 1375 aa13.67□□□□□ -0.22
CEACAM1-212ENST00000488639 ADGRA2Q96PE1 1338 aa13.66□□□□□ -0.22
CEACAM1-212ENST00000488639 CCDC196A0A1B0GTZ2 297 aa13.66□□□□□ -0.22
CEACAM1-212ENST00000488639 SMARCA1P28370 1054 aa13.66□□□□□ -0.22
CEACAM1-212ENST00000488639 NEK4P51957 841 aa13.66□□□□□ -0.22
CEACAM1-212ENST00000488639 DGKZQ13574 1117 aa13.66□□□□□ -0.22
CEACAM1-212ENST00000488639 CCDC96Q2M329 555 aa13.66□□□□□ -0.22
CEACAM1-212ENST00000488639 APOA5Q6Q788 366 aa13.66□□□□□ -0.22
CEACAM1-212ENST00000488639 CTCFLQ8NI51 663 aaPredicted RBP13.66□□□□□ -0.22
CEACAM1-212ENST00000488639 BRF1Q92994 677 aa13.66□□□□□ -0.22
CEACAM1-212ENST00000488639 KIF12Q96FN5 646 aa13.66□□□□□ -0.22
CEACAM1-212ENST00000488639 ZNF274Q96GC6 653 aaPredicted RBP13.66□□□□□ -0.22
CEACAM1-212ENST00000488639 KIF2CQ99661 725 aa13.66□□□□□ -0.22
CEACAM1-212ENST00000488639 LRRC2Q9BYS8 371 aa13.66□□□□□ -0.22
CEACAM1-212ENST00000488639 RBM28Q9NW13 759 aaKnown RBP13.66□□□□□ -0.22
CEACAM1-212ENST00000488639 RABGAP1Q9Y3P9 1069 aa13.66□□□□□ -0.22
CEACAM1-212ENST00000488639 COL11A1P12107 1806 aaPredicted RBP13.65□□□□□ -0.22
CEACAM1-212ENST00000488639 PALM3A6NDB9 673 aaPredicted RBP13.65□□□□□ -0.22
CEACAM1-212ENST00000488639 SPDYE16A6NNV3 312 aaPredicted RBP13.65□□□□□ -0.22
CEACAM1-212ENST00000488639 TMEM232C9JQI7 657 aa13.65□□□□□ -0.22
CEACAM1-212ENST00000488639 ZBTB43O43298 467 aa13.65□□□□□ -0.22
CEACAM1-212ENST00000488639 ST18O60284 1047 aa13.65□□□□□ -0.22
CEACAM1-212ENST00000488639 CPA1P15085 419 aa13.65□□□□□ -0.22
CEACAM1-212ENST00000488639 OAZ1P54368 228 aa13.65□□□□□ -0.22
CEACAM1-212ENST00000488639 CRHR2Q13324 411 aa13.65□□□□□ -0.22
CEACAM1-212ENST00000488639 COL9A3Q14050 684 aaPredicted RBP13.65□□□□□ -0.22
CEACAM1-212ENST00000488639 GSE1Q14687 1217 aa13.65□□□□□ -0.22
CEACAM1-212ENST00000488639 FAM110CQ1W6H9 321 aa13.65□□□□□ -0.22
CEACAM1-212ENST00000488639 FANCBQ8NB91 859 aa13.65□□□□□ -0.22
CEACAM1-212ENST00000488639 CHMP4CQ96CF2 233 aa13.65□□□□□ -0.22
CEACAM1-212ENST00000488639 MS4A3Q96HJ5 214 aa13.65□□□□□ -0.22
CEACAM1-212ENST00000488639 TCEANC2Q96MN5 208 aa13.65□□□□□ -0.22
CEACAM1-212ENST00000488639 P2RX7Q99572 595 aaKnown RBP13.65□□□□□ -0.22
CEACAM1-212ENST00000488639 MORF4L1Q9UBU8 362 aa13.65□□□□□ -0.22
CEACAM1-212ENST00000488639 MAD2L2Q9UI95 211 aa13.65□□□□□ -0.22
CEACAM1-212ENST00000488639 KLF18A0A0U1RQI7 1052 aa13.64□□□□□ -0.23
CEACAM1-212ENST00000488639 TRPA1O75762 1119 aa13.64□□□□□ -0.23
CEACAM1-212ENST00000488639 COPB2P35606 906 aa13.64□□□□□ -0.23
CEACAM1-212ENST00000488639 MCM2P49736 904 aa13.64□□□□□ -0.23
CEACAM1-212ENST00000488639 CCNA1P78396 465 aa13.64□□□□□ -0.23
CEACAM1-212ENST00000488639 TRAF1Q13077 416 aa13.64□□□□□ -0.23
CEACAM1-212ENST00000488639 IKQ13123 557 aaPredicted RBP13.64□□□□□ -0.23
CEACAM1-212ENST00000488639 TOB2Q14106 344 aaPredicted RBP13.64□□□□□ -0.23
CEACAM1-212ENST00000488639 C17orf99Q6UX52 265 aa13.64□□□□□ -0.23
CEACAM1-212ENST00000488639 KCTD1Q719H9 257 aa13.64□□□□□ -0.23
CEACAM1-212ENST00000488639 NUP88Q99567 741 aaPredicted RBP13.64□□□□□ -0.23
CEACAM1-212ENST00000488639 SENP2Q9HC62 589 aa13.64□□□□□ -0.23
CEACAM1-212ENST00000488639 MYH6P13533 1939 aa13.63□□□□□ -0.23
CEACAM1-212ENST00000488639 KLRF2D3W0D1 207 aa13.63□□□□□ -0.23
CEACAM1-212ENST00000488639 VWA5AO00534 786 aa13.63□□□□□ -0.23
CEACAM1-212ENST00000488639 ATP2A1O14983 1001 aa13.63□□□□□ -0.23
CEACAM1-212ENST00000488639 ZBED4O75132 1171 aa13.63□□□□□ -0.23
CEACAM1-212ENST00000488639 CYP2C8P10632 490 aa13.63□□□□□ -0.23
CEACAM1-212ENST00000488639 BCRP11274 1271 aa13.63□□□□□ -0.23
CEACAM1-212ENST00000488639 METAP2P50579 478 aaKnown RBP eCLIP13.63□□□□□ -0.23
CEACAM1-212ENST00000488639 SYDE2Q5VT97 1194 aa13.63□□□□□ -0.23
CEACAM1-212ENST00000488639 NUP133Q8WUM0 1156 aa13.63□□□□□ -0.23
CEACAM1-212ENST00000488639 SPZ1Q9BXG8 430 aa13.63□□□□□ -0.23
CEACAM1-212ENST00000488639 SLC38A10Q9HBR0 1119 aa13.63□□□□□ -0.23
CEACAM1-212ENST00000488639 GPHNQ9NQX3 736 aaPredicted RBP13.63□□□□□ -0.23
CEACAM1-212ENST00000488639 ISY1Q9ULR0 285 aaKnown RBP13.63□□□□□ -0.23
CEACAM1-212ENST00000488639 MTMR7Q9Y216 660 aa13.63□□□□□ -0.23
CEACAM1-212ENST00000488639 CTDP1Q9Y5B0 961 aaPredicted RBP13.63□□□□□ -0.23
CEACAM1-212ENST00000488639 FRMPD2Q68DX3 1309 aaPredicted RBP13.63□□□□□ -0.23
CEACAM1-212ENST00000488639 GOLGA8AA7E2F4 631 aa13.62□□□□□ -0.23
CEACAM1-212ENST00000488639 GOLGA8BA8MQT2 603 aa13.62□□□□□ -0.23
CEACAM1-212ENST00000488639 AK2P54819 239 aa13.62□□□□□ -0.23
CEACAM1-212ENST00000488639 APOBRQ0VD83 1088 aa13.62□□□□□ -0.23
CEACAM1-212ENST00000488639 ARHGEF6Q15052 776 aa13.62□□□□□ -0.23
CEACAM1-212ENST00000488639 RTN1Q16799 776 aa13.62□□□□□ -0.23
CEACAM1-212ENST00000488639 MICU3Q86XE3 530 aa13.62□□□□□ -0.23
CEACAM1-212ENST00000488639 GPRC5AQ8NFJ5 357 aa13.62□□□□□ -0.23
CEACAM1-212ENST00000488639 KIFC2Q96AC6 838 aa13.62□□□□□ -0.23
CEACAM1-212ENST00000488639 RANBP17Q9H2T7 1088 aaKnown RBP13.62□□□□□ -0.23
CEACAM1-212ENST00000488639 RIOX1Q9H6W3 641 aa13.62□□□□□ -0.23
CEACAM1-212ENST00000488639 GPCPD1Q9NPB8 672 aa13.62□□□□□ -0.23
CEACAM1-212ENST00000488639 FBXO28Q9NVF7 368 aa13.62□□□□□ -0.23
CEACAM1-212ENST00000488639 BRPF3Q9ULD4 1205 aa13.62□□□□□ -0.23
CEACAM1-212ENST00000488639 PRR12Q9ULL5 1215 aa13.62□□□□□ -0.23
CEACAM1-212ENST00000488639 MGAMO43451 1857 aa13.61□□□□□ -0.23
CEACAM1-212ENST00000488639 MAP3K13O43283 966 aa13.61□□□□□ -0.23
CEACAM1-212ENST00000488639 DHX16O60231 1041 aaKnown RBP13.61□□□□□ -0.23
CEACAM1-212ENST00000488639 SLC25A27O95847 323 aa13.61□□□□□ -0.23
CEACAM1-212ENST00000488639 PDIA3P30101 505 aaKnown RBP13.61□□□□□ -0.23
CEACAM1-212ENST00000488639 ERVK-9P63128 1117 aa13.61□□□□□ -0.23
CEACAM1-212ENST00000488639 ERVK-24P63145 666 aa13.61□□□□□ -0.23
CEACAM1-212ENST00000488639 SHCBP1Q8NEM2 672 aa13.61□□□□□ -0.23
CEACAM1-212ENST00000488639 REPS2Q8NFH8 660 aa13.61□□□□□ -0.23
CEACAM1-212ENST00000488639 ATG4CQ96DT6 458 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms