RNA–Protein interactions for RNA: ENST00000488535.2

ABCA2-219, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 3,327 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-219ENST00000488535 HLTFQ14527 1009 aaKnown RBP eCLIP14.67□□□□□ -0.06
ABCA2-219ENST00000488535 LRCH2Q5VUJ6 765 aa14.67□□□□□ -0.06
ABCA2-219ENST00000488535 UBN2Q6ZU65 1347 aa14.67□□□□□ -0.06
ABCA2-219ENST00000488535 GDAQ9Y2T3 454 aa14.67□□□□□ -0.06
ABCA2-219ENST00000488535 A0A087X0B3 334 aa14.66□□□□□ -0.06
ABCA2-219ENST00000488535 ZSCAN5CA6NGD5 496 aaPredicted RBP14.66□□□□□ -0.06
ABCA2-219ENST00000488535 KRT86O43790 486 aa14.66□□□□□ -0.06
ABCA2-219ENST00000488535 ITGA6P23229 1130 aa14.66□□□□□ -0.06
ABCA2-219ENST00000488535 IL15P40933 162 aaPredicted RBP14.66□□□□□ -0.06
ABCA2-219ENST00000488535 KLK7P49862 253 aa14.66□□□□□ -0.06
ABCA2-219ENST00000488535 COPB1P53618 953 aaKnown RBP14.66□□□□□ -0.06
ABCA2-219ENST00000488535 RABL6Q3YEC7 729 aaPredicted RBP14.66□□□□□ -0.06
ABCA2-219ENST00000488535 CCNI2Q6ZMN8 369 aaPredicted RBP14.66□□□□□ -0.06
ABCA2-219ENST00000488535 PRPF38AQ8NAV1 312 aaKnown RBP14.66□□□□□ -0.06
ABCA2-219ENST00000488535 KCNG1Q9UIX4 513 aa14.66□□□□□ -0.06
ABCA2-219ENST00000488535 XIRP1Q702N8 1843 aaKnown RBP14.66□□□□□ -0.06
ABCA2-219ENST00000488535 ZMYM6O95789 1325 aa14.66□□□□□ -0.06
ABCA2-219ENST00000488535 MAP3K15Q6ZN16 1313 aa14.66□□□□□ -0.06
ABCA2-219ENST00000488535 CCDC196A0A1B0GTZ2 297 aa14.66□□□□□ -0.06
ABCA2-219ENST00000488535 HGSO14964 777 aaPredicted RBP14.66□□□□□ -0.06
ABCA2-219ENST00000488535 TOB1P50616 345 aaPredicted RBP14.66□□□□□ -0.06
ABCA2-219ENST00000488535 CKAP4Q07065 602 aaKnown RBP14.66□□□□□ -0.06
ABCA2-219ENST00000488535 TSEN2Q8NCE0 465 aaKnown RBP14.66□□□□□ -0.06
ABCA2-219ENST00000488535 NELFBQ8WX92 580 aa14.66□□□□□ -0.06
ABCA2-219ENST00000488535 AGXT2Q9BYV1 514 aa14.66□□□□□ -0.06
ABCA2-219ENST00000488535 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.66□□□□□ -0.06
ABCA2-219ENST00000488535 PALLDQ8WX93 1383 aa14.66□□□□□ -0.06
ABCA2-219ENST00000488535 TTF1Q15361 905 aaPredicted RBP14.66□□□□□ -0.06
ABCA2-219ENST00000488535 MEX3CQ5U5Q3 659 aaKnown RBP14.66□□□□□ -0.06
ABCA2-219ENST00000488535 GIGYF2Q6Y7W6 1299 aaKnown RBP14.66□□□□□ -0.06
ABCA2-219ENST00000488535 ATG9AQ7Z3C6 839 aa14.66□□□□□ -0.06
ABCA2-219ENST00000488535 VEZTQ9HBM0 779 aa14.66□□□□□ -0.06
ABCA2-219ENST00000488535 BUB1O43683 1085 aa14.65□□□□□ -0.06
ABCA2-219ENST00000488535 MDM2Q00987 491 aaPredicted RBP14.65□□□□□ -0.06
ABCA2-219ENST00000488535 WDR93Q6P2C0 686 aa14.65□□□□□ -0.06
ABCA2-219ENST00000488535 NFRKBQ6P4R8 1299 aa14.65□□□□□ -0.06
ABCA2-219ENST00000488535 CNPY4Q8N129 248 aa14.65□□□□□ -0.06
ABCA2-219ENST00000488535 MLXIPQ9HAP2 919 aa14.65□□□□□ -0.06
ABCA2-219ENST00000488535 LOC102724428A0A0B4J2F2 783 aa14.65□□□□□ -0.06
ABCA2-219ENST00000488535 OPA1O60313 960 aa14.65□□□□□ -0.06
ABCA2-219ENST00000488535 SIK1P57059 783 aa14.65□□□□□ -0.06
ABCA2-219ENST00000488535 HDLBPQ00341 1268 aaKnown RBP14.65□□□□□ -0.06
ABCA2-219ENST00000488535 CFAP58Q5T655 872 aa14.65□□□□□ -0.06
ABCA2-219ENST00000488535 NAIF1Q69YI7 327 aaPredicted RBP14.65□□□□□ -0.06
ABCA2-219ENST00000488535 NLRP10Q86W26 655 aa14.65□□□□□ -0.06
ABCA2-219ENST00000488535 TRIM47Q96LD4 638 aa14.65□□□□□ -0.06
ABCA2-219ENST00000488535 FBXO2Q9UK22 296 aaPredicted RBP14.65□□□□□ -0.06
ABCA2-219ENST00000488535 MYO1BO43795 1136 aa14.64□□□□□ -0.07
ABCA2-219ENST00000488535 CRKLP46109 303 aaKnown RBP14.64□□□□□ -0.07
ABCA2-219ENST00000488535 KIF5AQ12840 1032 aa14.64□□□□□ -0.07
ABCA2-219ENST00000488535 NEDD9Q14511 834 aa14.64□□□□□ -0.07
ABCA2-219ENST00000488535 CCDC121Q6ZUS5 278 aa14.64□□□□□ -0.07
ABCA2-219ENST00000488535 B4GALNT4Q76KP1 1039 aa14.64□□□□□ -0.07
ABCA2-219ENST00000488535 PTF1AQ7RTS3 328 aa14.64□□□□□ -0.07
ABCA2-219ENST00000488535 PAGE5Q96GU1 130 aa14.64□□□□□ -0.07
ABCA2-219ENST00000488535 RNPC3Q96LT9 517 aaKnown RBP14.64□□□□□ -0.07
ABCA2-219ENST00000488535 AGPAT5Q9NUQ2 364 aa14.64□□□□□ -0.07
ABCA2-219ENST00000488535 LRWD1Q9UFC0 647 aa14.64□□□□□ -0.07
ABCA2-219ENST00000488535 NFU1Q9UMS0 254 aa14.64□□□□□ -0.07
ABCA2-219ENST00000488535 C5P01031 1676 aa14.64□□□□□ -0.07
ABCA2-219ENST00000488535 B4DLN1 442 aa14.64□□□□□ -0.07
ABCA2-219ENST00000488535 MOCS3O95396 460 aa14.64□□□□□ -0.07
ABCA2-219ENST00000488535 ELF1P32519 619 aa14.64□□□□□ -0.07
ABCA2-219ENST00000488535 SLC4A8Q2Y0W8 1093 aa14.64□□□□□ -0.07
ABCA2-219ENST00000488535 CCDC40Q4G0X9 1142 aa14.64□□□□□ -0.07
ABCA2-219ENST00000488535 SWT1Q5T5J6 900 aaKnown RBP14.64□□□□□ -0.07
ABCA2-219ENST00000488535 TYW1BQ6NUM6 668 aa14.64□□□□□ -0.07
ABCA2-219ENST00000488535 TRAPPC11Q7Z392 1133 aa14.64□□□□□ -0.07
ABCA2-219ENST00000488535 OR8K1Q8NGG5 319 aa14.64□□□□□ -0.07
ABCA2-219ENST00000488535 XAGE2Q96GT9 111 aa14.64□□□□□ -0.07
ABCA2-219ENST00000488535 MS4A14Q96JA4 679 aa14.64□□□□□ -0.07
ABCA2-219ENST00000488535 PLCD4Q9BRC7 762 aa14.64□□□□□ -0.07
ABCA2-219ENST00000488535 KLC4Q9NSK0 619 aa14.64□□□□□ -0.07
ABCA2-219ENST00000488535 MAGEC2Q9UBF1 373 aaPredicted RBP14.64□□□□□ -0.07
ABCA2-219ENST00000488535 BAIAP2L1Q9UHR4 511 aa14.64□□□□□ -0.07
ABCA2-219ENST00000488535 NIP7Q9Y221 180 aaKnown RBP eCLIP14.64□□□□□ -0.07
ABCA2-219ENST00000488535 REXO2Q9Y3B8 237 aaKnown RBP14.64□□□□□ -0.07
ABCA2-219ENST00000488535 RCCD1A6NED2 376 aa14.64□□□□□ -0.07
ABCA2-219ENST00000488535 TUBBP07437 444 aa14.64□□□□□ -0.07
ABCA2-219ENST00000488535 SPA17Q15506 151 aa14.64□□□□□ -0.07
ABCA2-219ENST00000488535 IQCA1Q86XH1 822 aa14.64□□□□□ -0.07
ABCA2-219ENST00000488535 ZBTB38Q8NAP3 1195 aaPredicted RBP14.64□□□□□ -0.07
ABCA2-219ENST00000488535 ZKSCAN4Q969J2 545 aaPredicted RBP14.64□□□□□ -0.07
ABCA2-219ENST00000488535 ISCA1Q9BUE6 129 aa14.64□□□□□ -0.07
ABCA2-219ENST00000488535 FAM184BQ9ULE4 1060 aa14.64□□□□□ -0.07
ABCA2-219ENST00000488535 IQSEC3Q9UPP2 1182 aaPredicted RBP14.64□□□□□ -0.07
ABCA2-219ENST00000488535 SCN11AQ9UI33 1791 aa14.63□□□□□ -0.07
ABCA2-219ENST00000488535 MINDY4BA8MYZ0 360 aa14.63□□□□□ -0.07
ABCA2-219ENST00000488535 MCM7P33993 719 aa14.63□□□□□ -0.07
ABCA2-219ENST00000488535 TUBB2AQ13885 445 aa14.63□□□□□ -0.07
ABCA2-219ENST00000488535 TTMPQ5BVD1 217 aa14.63□□□□□ -0.07
ABCA2-219ENST00000488535 C8orf74Q6P047 294 aa14.63□□□□□ -0.07
ABCA2-219ENST00000488535 TUBB2BQ9BVA1 445 aa14.63□□□□□ -0.07
ABCA2-219ENST00000488535 SPATA31A1Q5TZJ5 1347 aa14.63□□□□□ -0.07
ABCA2-219ENST00000488535 ERICH2A1L162 156 aa14.63□□□□□ -0.07
ABCA2-219ENST00000488535 TRIM75PA6NK02 468 aa14.63□□□□□ -0.07
ABCA2-219ENST00000488535 MEFVO15553 781 aaPredicted RBP14.63□□□□□ -0.07
ABCA2-219ENST00000488535 ACTN4O43707 911 aaKnown RBP14.63□□□□□ -0.07
ABCA2-219ENST00000488535 PTPREP23469 700 aa14.63□□□□□ -0.07
ABCA2-219ENST00000488535 AMPD2Q01433 879 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms