RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 TARSL2A2RTX5 802 aaKnown RBP7.06□□□□□ -1.28
SIK3-212ENST00000488337 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.06□□□□□ -1.28
SIK3-212ENST00000488337 ST3GAL1Q11201 340 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 TBX2Q13207 712 aaPredicted RBP7.06□□□□□ -1.28
SIK3-212ENST00000488337 PTGISQ16647 500 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 ATL3Q6DD88 541 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 PEX5LQ8IYB4 626 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 SMC1BQ8NDV3 1235 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 HAPLN3Q96S86 360 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 XPO4Q9C0E2 1151 aaKnown RBP7.06□□□□□ -1.28
SIK3-212ENST00000488337 LUC7LQ9NQ29 371 aaKnown RBP7.06□□□□□ -1.28
SIK3-212ENST00000488337 NOP53Q9NZM5 478 aaKnown RBP7.06□□□□□ -1.28
SIK3-212ENST00000488337 SLC12A4Q9UP95 1085 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 MTMR7Q9Y216 660 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 TULP4Q9NRJ4 1543 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 RICTORQ6R327 1708 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 MYPNQ86TC9 1320 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 ADGRB3O60242 1522 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 GOLGA8KD6RF30 607 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 KCNA2P16389 499 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 CLCN2P51788 898 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 AMPD2Q01433 879 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 FAAH2Q6GMR7 532 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 C1orf131Q8NDD1 294 aaKnown RBP7.06□□□□□ -1.28
SIK3-212ENST00000488337 UHMK1Q8TAS1 419 aaKnown RBP7.06□□□□□ -1.28
SIK3-212ENST00000488337 IRGQQ8WZA9 623 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 KIFAP3Q92845 792 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 ADGRB1O14514 1584 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 WDR46O15213 610 aaKnown RBP7.06□□□□□ -1.28
SIK3-212ENST00000488337 ARHGAP6O43182 974 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 KIF4AO95239 1232 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 GPSM2P81274 684 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 GUCY1B3Q02153 619 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 STIM1Q13586 685 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 POLA2Q14181 598 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 NCAPHQ15003 741 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 THOC7Q6I9Y2 204 aaKnown RBP7.06□□□□□ -1.28
SIK3-212ENST00000488337 G2E3Q7L622 706 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 LRRC49Q8IUZ0 686 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 CCDC155Q8N6L0 562 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 SLC43A3Q8NBI5 491 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 AGAP11Q8TF27 550 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 AENQ8WTP8 325 aaKnown RBP7.06□□□□□ -1.28
SIK3-212ENST00000488337 TBC1D31Q96DN5 1066 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 LTV1Q96GA3 475 aaPredicted RBP7.06□□□□□ -1.28
SIK3-212ENST00000488337 CENPHQ9H3R5 247 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 TBC1D30Q9Y2I9 924 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 SUGT1Q9Y2Z0 365 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 SLC4A7Q9Y6M7 1214 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 HTR3EA5X5Y0 456 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 UPP2O95045 317 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 HDLBPQ00341 1268 aaKnown RBP7.06□□□□□ -1.28
SIK3-212ENST00000488337 FLIIQ13045 1269 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 NBPF14Q5TI25 921 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 ARHGAP27Q6ZUM4 889 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 RNF168Q8IYW5 571 aaPredicted RBP7.06□□□□□ -1.28
SIK3-212ENST00000488337 DEPTORQ8TB45 409 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 FAM136AQ96C01 138 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 SRPK1Q96SB4 655 aaKnown RBP7.06□□□□□ -1.28
SIK3-212ENST00000488337 CCT8L2Q96SF2 557 aa7.06□□□□□ -1.28
SIK3-212ENST00000488337 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.06□□□□□ -1.28
SIK3-212ENST00000488337 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.06□□□□□ -1.28
SIK3-212ENST00000488337 VWDEQ8N2E2 1590 aa7.05□□□□□ -1.28
SIK3-212ENST00000488337 BOLA2-SMG1P6H3BVE0 249 aa7.05□□□□□ -1.28
SIK3-212ENST00000488337 PSMD7P51665 324 aa7.05□□□□□ -1.28
SIK3-212ENST00000488337 MRPS35P82673 323 aaKnown RBP7.05□□□□□ -1.28
SIK3-212ENST00000488337 EIF4A2Q14240 407 aaKnown RBP7.05□□□□□ -1.28
SIK3-212ENST00000488337 UBE3BQ7Z3V4 1068 aa7.05□□□□□ -1.28
SIK3-212ENST00000488337 NOA1Q8NC60 698 aaKnown RBP7.05□□□□□ -1.28
SIK3-212ENST00000488337 RUFY1Q96T51 708 aa7.05□□□□□ -1.28
SIK3-212ENST00000488337 OSBPL10Q9BXB5 764 aa7.05□□□□□ -1.28
SIK3-212ENST00000488337 MRPL46Q9H2W6 279 aaKnown RBP7.05□□□□□ -1.28
SIK3-212ENST00000488337 SH3GLB1Q9Y371 365 aa7.05□□□□□ -1.28
SIK3-212ENST00000488337 OVOS2A0A0G2JMS6 1433 aa7.05□□□□□ -1.28
SIK3-212ENST00000488337 OVOS2A0A0J9YW53 1432 aa7.05□□□□□ -1.28
SIK3-212ENST00000488337 OVOS2Q6IE36 1432 aa7.05□□□□□ -1.28
SIK3-212ENST00000488337 SP100P23497 879 aaPredicted RBP7.05□□□□□ -1.28
SIK3-212ENST00000488337 GNG11P61952 73 aa7.05□□□□□ -1.28
SIK3-212ENST00000488337 ATP8B2P98198 1209 aa7.05□□□□□ -1.28
SIK3-212ENST00000488337 SEZ6LQ9BYH1 1024 aa7.05□□□□□ -1.28
SIK3-212ENST00000488337 PAIP2BQ9ULR5 123 aaKnown RBP7.05□□□□□ -1.28
SIK3-212ENST00000488337 SALL3Q9BXA9 1300 aa7.05□□□□□ -1.28
SIK3-212ENST00000488337 BECN2A8MW95 431 aa7.05□□□□□ -1.28
SIK3-212ENST00000488337 USP14P54578 494 aa7.05□□□□□ -1.28
SIK3-212ENST00000488337 KRT85P78386 507 aa7.05□□□□□ -1.28
SIK3-212ENST00000488337 ANKRD20A2Q5SQ80 823 aa7.05□□□□□ -1.28
SIK3-212ENST00000488337 ANKRD20A1Q5TYW2 823 aa7.05□□□□□ -1.28
SIK3-212ENST00000488337 ANKRD20A3Q5VUR7 823 aa7.05□□□□□ -1.28
SIK3-212ENST00000488337 TMEM53Q6P2H8 277 aa7.05□□□□□ -1.28
SIK3-212ENST00000488337 ZNF804AQ7Z570 1209 aa7.05□□□□□ -1.28
SIK3-212ENST00000488337 NLRP14Q86W24 1093 aa7.05□□□□□ -1.28
SIK3-212ENST00000488337 CCDC83Q8IWF9 413 aa7.05□□□□□ -1.28
SIK3-212ENST00000488337 GPATCH3Q96I76 525 aa7.05□□□□□ -1.28
SIK3-212ENST00000488337 MYH13Q9UKX3 1938 aa7.04□□□□□ -1.28
SIK3-212ENST00000488337 P4HA2O15460 535 aa7.04□□□□□ -1.28
SIK3-212ENST00000488337 BAG3O95817 575 aa7.04□□□□□ -1.28
SIK3-212ENST00000488337 GNAZP19086 355 aa7.04□□□□□ -1.28
SIK3-212ENST00000488337 NEK2P51955 445 aa7.04□□□□□ -1.28
SIK3-212ENST00000488337 LARP1BQ659C4 914 aaKnown RBP7.04□□□□□ -1.28
SIK3-212ENST00000488337 HOOK3Q86VS8 718 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms