RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 PPP2R5DQ14738 602 aa5.87□□□□□ -1.47
ECHDC1-217ENST00000488087 TMPRSS7Q7RTY8 843 aa5.87□□□□□ -1.47
ECHDC1-217ENST00000488087 CREG2Q8IUH2 290 aa5.87□□□□□ -1.47
ECHDC1-217ENST00000488087 FIBCD1Q8N539 461 aa5.87□□□□□ -1.47
ECHDC1-217ENST00000488087 ZNF655Q8N720 491 aaPredicted RBP5.87□□□□□ -1.47
ECHDC1-217ENST00000488087 DAGLBQ8NCG7 672 aa5.87□□□□□ -1.47
ECHDC1-217ENST00000488087 FLCNQ8NFG4 579 aa5.87□□□□□ -1.47
ECHDC1-217ENST00000488087 SYTL5Q8TDW5 730 aaPredicted RBP5.87□□□□□ -1.47
ECHDC1-217ENST00000488087 HDAC8Q9BY41 377 aa5.87□□□□□ -1.47
ECHDC1-217ENST00000488087 LNPKQ9C0E8 428 aa5.87□□□□□ -1.47
ECHDC1-217ENST00000488087 ZSWIM4Q9H7M6 989 aa5.87□□□□□ -1.47
ECHDC1-217ENST00000488087 PRR13Q9NZ81 148 aa5.87□□□□□ -1.47
ECHDC1-217ENST00000488087 LRP2BPQ9P2M1 347 aa5.87□□□□□ -1.47
ECHDC1-217ENST00000488087 FHOD1Q9Y613 1164 aa5.87□□□□□ -1.47
ECHDC1-217ENST00000488087 AGRPO00253 132 aa5.86□□□□□ -1.47
ECHDC1-217ENST00000488087 PDPK1O15530 556 aa5.86□□□□□ -1.47
ECHDC1-217ENST00000488087 PRNPP04156 253 aa5.86□□□□□ -1.47
ECHDC1-217ENST00000488087 SERINC3Q13530 473 aa5.86□□□□□ -1.47
ECHDC1-217ENST00000488087 BMS1Q14692 1282 aaKnown RBP5.86□□□□□ -1.47
ECHDC1-217ENST00000488087 CCDC144BQ3MJ40 725 aa5.86□□□□□ -1.47
ECHDC1-217ENST00000488087 ANGEL2Q5VTE6 544 aaKnown RBP5.86□□□□□ -1.47
ECHDC1-217ENST00000488087 CWF19L1Q69YN2 538 aaKnown RBP5.86□□□□□ -1.47
ECHDC1-217ENST00000488087 MCTP1Q6DN14 999 aa5.86□□□□□ -1.47
ECHDC1-217ENST00000488087 ZNF574Q6ZN55 896 aaPredicted RBP5.86□□□□□ -1.47
ECHDC1-217ENST00000488087 DPH6Q7L8W6 267 aa5.86□□□□□ -1.47
ECHDC1-217ENST00000488087 TCTN2Q96GX1 697 aa5.86□□□□□ -1.47
ECHDC1-217ENST00000488087 ZDHHC15Q96MV8 337 aa5.86□□□□□ -1.47
ECHDC1-217ENST00000488087 APEX2Q9UBZ4 518 aa5.86□□□□□ -1.47
ECHDC1-217ENST00000488087 SUSD2Q9UGT4 822 aa5.86□□□□□ -1.47
ECHDC1-217ENST00000488087 SF3B6Q9Y3B4 125 aaKnown RBP5.86□□□□□ -1.47
ECHDC1-217ENST00000488087 NOP56O00567 594 aaKnown RBP5.85□□□□□ -1.47
ECHDC1-217ENST00000488087 IGSF3O75054 1194 aa5.85□□□□□ -1.47
ECHDC1-217ENST00000488087 WNT11O96014 354 aa5.85□□□□□ -1.47
ECHDC1-217ENST00000488087 CD8BP10966 210 aa5.85□□□□□ -1.47
ECHDC1-217ENST00000488087 EGR3Q06889 387 aa5.85□□□□□ -1.47
ECHDC1-217ENST00000488087 IFRD2Q12894 506 aaPredicted RBP5.85□□□□□ -1.47
ECHDC1-217ENST00000488087 NFE2L2Q16236 605 aa5.85□□□□□ -1.47
ECHDC1-217ENST00000488087 MTERF2Q49AM1 385 aa5.85□□□□□ -1.47
ECHDC1-217ENST00000488087 SPRED2Q7Z698 418 aa5.85□□□□□ -1.47
ECHDC1-217ENST00000488087 TP53INP2Q8IXH6 220 aa5.85□□□□□ -1.47
ECHDC1-217ENST00000488087 LRRN4CLQ8ND94 238 aa5.85□□□□□ -1.47
ECHDC1-217ENST00000488087 SYTL4Q96C24 671 aaPredicted RBP5.85□□□□□ -1.47
ECHDC1-217ENST00000488087 DEPDC7Q96QD5 511 aa5.85□□□□□ -1.47
ECHDC1-217ENST00000488087 CCDC113Q9H0I3 377 aa5.85□□□□□ -1.47
ECHDC1-217ENST00000488087 SNTG2Q9NY99 539 aa5.85□□□□□ -1.47
ECHDC1-217ENST00000488087 DIS3Q9Y2L1 958 aaKnown RBP5.85□□□□□ -1.47
ECHDC1-217ENST00000488087 MSRB2Q9Y3D2 182 aa5.85□□□□□ -1.47
ECHDC1-217ENST00000488087 A0A087WZG4 1122 aa5.84□□□□□ -1.47
ECHDC1-217ENST00000488087 H0Y8X5 98 aa5.84□□□□□ -1.47
ECHDC1-217ENST00000488087 FKTNO75072 461 aa5.84□□□□□ -1.47
ECHDC1-217ENST00000488087 GSNP06396 782 aa5.84□□□□□ -1.47
ECHDC1-217ENST00000488087 SYPP08247 313 aa5.84□□□□□ -1.47
ECHDC1-217ENST00000488087 PCBP3P57721 371 aaKnown RBP5.84□□□□□ -1.47
ECHDC1-217ENST00000488087 ZP2Q05996 745 aa5.84□□□□□ -1.47
ECHDC1-217ENST00000488087 RASGRF1Q13972 1273 aa5.84□□□□□ -1.47
ECHDC1-217ENST00000488087 RASA3Q14644 834 aa5.84□□□□□ -1.47
ECHDC1-217ENST00000488087 GAB4Q2WGN9 574 aa5.84□□□□□ -1.47
ECHDC1-217ENST00000488087 SLC10A6Q3KNW5 377 aa5.84□□□□□ -1.47
ECHDC1-217ENST00000488087 CRTC3Q6UUV7 619 aa5.84□□□□□ -1.47
ECHDC1-217ENST00000488087 CRACR2BQ8N4Y2 399 aaPredicted RBP5.84□□□□□ -1.47
ECHDC1-217ENST00000488087 BVESQ8NE79 360 aa5.84□□□□□ -1.47
ECHDC1-217ENST00000488087 MKL1Q969V6 931 aa5.84□□□□□ -1.47
ECHDC1-217ENST00000488087 MRFAP1L1Q96HT8 127 aa5.84□□□□□ -1.47
ECHDC1-217ENST00000488087 FOXP3Q9BZS1 431 aa5.84□□□□□ -1.47
ECHDC1-217ENST00000488087 EPN3Q9H201 632 aa5.84□□□□□ -1.47
ECHDC1-217ENST00000488087 CARS2Q9HA77 564 aaKnown RBP5.84□□□□□ -1.47
ECHDC1-217ENST00000488087 CGGBP1Q9UFW8 167 aaPredicted RBP5.84□□□□□ -1.47
ECHDC1-217ENST00000488087 TCFL5Q9UL49 500 aa5.84□□□□□ -1.47
ECHDC1-217ENST00000488087 CDK11AQ9UQ88 783 aaPredicted RBP5.84□□□□□ -1.47
ECHDC1-217ENST00000488087 AKT3Q9Y243 479 aa5.84□□□□□ -1.47
ECHDC1-217ENST00000488087 PCDHA11Q9Y5I1 949 aa5.84□□□□□ -1.47
ECHDC1-217ENST00000488087 KCNH1O95259 989 aa5.83□□□□□ -1.48
ECHDC1-217ENST00000488087 ESR1P03372 595 aa5.83□□□□□ -1.48
ECHDC1-217ENST00000488087 CTSKP43235 329 aa5.83□□□□□ -1.48
ECHDC1-217ENST00000488087 POU4F1Q01851 419 aa5.83□□□□□ -1.48
ECHDC1-217ENST00000488087 PLCL1Q15111 1095 aa5.83□□□□□ -1.48
ECHDC1-217ENST00000488087 POMZP3Q6PJE2 187 aa5.83□□□□□ -1.48
ECHDC1-217ENST00000488087 RNF111Q6ZNA4 994 aa5.83□□□□□ -1.48
ECHDC1-217ENST00000488087 ST13P5Q8NFI4 369 aaPredicted RBP5.83□□□□□ -1.48
ECHDC1-217ENST00000488087 RCC1LQ96I51 464 aaKnown RBP5.83□□□□□ -1.48
ECHDC1-217ENST00000488087 CWC22Q9HCG8 908 aaKnown RBP5.83□□□□□ -1.48
ECHDC1-217ENST00000488087 PFDN2Q9UHV9 154 aa5.83□□□□□ -1.48
ECHDC1-217ENST00000488087 FAM221BA6H8Z2 402 aa5.82□□□□□ -1.48
ECHDC1-217ENST00000488087 IQCA1LA6NCM1 817 aa5.82□□□□□ -1.48
ECHDC1-217ENST00000488087 CD3EP07766 207 aa5.82□□□□□ -1.48
ECHDC1-217ENST00000488087 RPL10P27635 214 aaKnown RBP5.82□□□□□ -1.48
ECHDC1-217ENST00000488087 NOP2P46087 812 aaKnown RBP5.82□□□□□ -1.48
ECHDC1-217ENST00000488087 AMPD2Q01433 879 aa5.82□□□□□ -1.48
ECHDC1-217ENST00000488087 SSRP1Q08945 709 aaKnown RBP5.82□□□□□ -1.48
ECHDC1-217ENST00000488087 LRP10Q7Z4F1 713 aa5.82□□□□□ -1.48
ECHDC1-217ENST00000488087 ARHGEF39Q8N4T4 335 aa5.82□□□□□ -1.48
ECHDC1-217ENST00000488087 USHBP1Q8N6Y0 703 aa5.82□□□□□ -1.48
ECHDC1-217ENST00000488087 AGBL5Q8NDL9 886 aa5.82□□□□□ -1.48
ECHDC1-217ENST00000488087 LGR4Q9BXB1 951 aa5.82□□□□□ -1.48
ECHDC1-217ENST00000488087 PAK6Q9NQU5 681 aaPredicted RBP5.82□□□□□ -1.48
ECHDC1-217ENST00000488087 LMCD1Q9NZU5 365 aa5.82□□□□□ -1.48
ECHDC1-217ENST00000488087 ADAMTS4O75173 837 aa5.81□□□□□ -1.48
ECHDC1-217ENST00000488087 VAMP4O75379 141 aa5.81□□□□□ -1.48
ECHDC1-217ENST00000488087 ITGAVP06756 1048 aa5.81□□□□□ -1.48
ECHDC1-217ENST00000488087 VAV1P15498 845 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms