RNA–Protein interactions for RNA: ENST00000487996.5

HLA-DMB-261, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-261ENST00000487996 UBE2Q2LH0YL09 131 aa12.22□□□□□ -0.45
HLA-DMB-261ENST00000487996 H3BQV1 296 aa12.22□□□□□ -0.45
HLA-DMB-261ENST00000487996 hCG_1984214I3L0E3 225 aa12.22□□□□□ -0.45
HLA-DMB-261ENST00000487996 TRAF1Q13077 416 aa12.22□□□□□ -0.45
HLA-DMB-261ENST00000487996 SH3D19Q5HYK7 790 aa12.22□□□□□ -0.45
HLA-DMB-261ENST00000487996 BTNL9Q6UXG8 535 aa12.22□□□□□ -0.45
HLA-DMB-261ENST00000487996 MOB2Q70IA6 237 aa12.22□□□□□ -0.45
HLA-DMB-261ENST00000487996 ZNF713Q8N859 430 aaPredicted RBP12.22□□□□□ -0.45
HLA-DMB-261ENST00000487996 OTUD5Q96G74 571 aa12.22□□□□□ -0.45
HLA-DMB-261ENST00000487996 C8orf76Q96K31 380 aa12.22□□□□□ -0.45
HLA-DMB-261ENST00000487996 V9GY48 417 aaPredicted RBP12.22□□□□□ -0.45
HLA-DMB-261ENST00000487996 TMEM232C9JQI7 657 aa12.21□□□□□ -0.45
HLA-DMB-261ENST00000487996 STX6O43752 255 aa12.21□□□□□ -0.45
HLA-DMB-261ENST00000487996 VCAM1P19320 739 aa12.21□□□□□ -0.45
HLA-DMB-261ENST00000487996 SYT1P21579 422 aa12.21□□□□□ -0.45
HLA-DMB-261ENST00000487996 FSTL1Q12841 308 aa12.21□□□□□ -0.45
HLA-DMB-261ENST00000487996 FAM83BQ5T0W9 1011 aa12.21□□□□□ -0.45
HLA-DMB-261ENST00000487996 CMTR1Q8N1G2 835 aaKnown RBP12.21□□□□□ -0.45
HLA-DMB-261ENST00000487996 DNAJC5GQ8N7S2 189 aa12.21□□□□□ -0.45
HLA-DMB-261ENST00000487996 CCDC12Q8WUD4 166 aaPredicted RBP12.21□□□□□ -0.45
HLA-DMB-261ENST00000487996 OPTNQ96CV9 577 aa12.21□□□□□ -0.45
HLA-DMB-261ENST00000487996 CLMNQ96JQ2 1002 aa12.21□□□□□ -0.45
HLA-DMB-261ENST00000487996 ALG1Q9BT22 464 aa12.21□□□□□ -0.45
HLA-DMB-261ENST00000487996 KCNH4Q9UQ05 1017 aa12.21□□□□□ -0.45
HLA-DMB-261ENST00000487996 PASKQ96RG2 1323 aa12.2□□□□□ -0.46
HLA-DMB-261ENST00000487996 FDX1P10109 184 aa12.2□□□□□ -0.46
HLA-DMB-261ENST00000487996 SCG2P13521 617 aa12.2□□□□□ -0.46
HLA-DMB-261ENST00000487996 FDPSP14324 419 aaKnown RBP12.2□□□□□ -0.46
HLA-DMB-261ENST00000487996 HMGCS2P54868 508 aa12.2□□□□□ -0.46
HLA-DMB-261ENST00000487996 PFKFB3Q16875 520 aaPredicted RBP12.2□□□□□ -0.46
HLA-DMB-261ENST00000487996 SYDE2Q5VT97 1194 aa12.2□□□□□ -0.46
HLA-DMB-261ENST00000487996 FASTKD5Q7L8L6 764 aaKnown RBP12.2□□□□□ -0.46
HLA-DMB-261ENST00000487996 RASGRP2Q7LDG7 609 aa12.2□□□□□ -0.46
HLA-DMB-261ENST00000487996 PROCA1Q8NCQ7 364 aaPredicted RBP12.2□□□□□ -0.46
HLA-DMB-261ENST00000487996 UBA5Q9GZZ9 404 aa12.2□□□□□ -0.46
HLA-DMB-261ENST00000487996 SH3GLB2Q9NR46 395 aa12.2□□□□□ -0.46
HLA-DMB-261ENST00000487996 EMILIN3Q9NT22 766 aa12.2□□□□□ -0.46
HLA-DMB-261ENST00000487996 PNMA2Q9UL42 364 aa12.2□□□□□ -0.46
HLA-DMB-261ENST00000487996 PTPRFP10586 1907 aa12.2□□□□□ -0.46
HLA-DMB-261ENST00000487996 A0A0G2JLL6 359 aaPredicted RBP12.2□□□□□ -0.46
HLA-DMB-261ENST00000487996 PNMA6FA0A0J9YX94 578 aa12.2□□□□□ -0.46
HLA-DMB-261ENST00000487996 IRF6O14896 467 aa12.2□□□□□ -0.46
HLA-DMB-261ENST00000487996 ZBTB5O15062 677 aa12.2□□□□□ -0.46
HLA-DMB-261ENST00000487996 CYTH3O43739 400 aa12.2□□□□□ -0.46
HLA-DMB-261ENST00000487996 ZBTB48P10074 688 aaPredicted RBP12.2□□□□□ -0.46
HLA-DMB-261ENST00000487996 FMR1Q06787 632 aaKnown RBP eCLIP12.2□□□□□ -0.46
HLA-DMB-261ENST00000487996 SNAPC2Q13487 334 aa12.2□□□□□ -0.46
HLA-DMB-261ENST00000487996 CST9Q5W186 159 aa12.2□□□□□ -0.46
HLA-DMB-261ENST00000487996 PRRT2Q7Z6L0 340 aaPredicted RBP12.2□□□□□ -0.46
HLA-DMB-261ENST00000487996 ADGRF4Q8IZF3 695 aa12.2□□□□□ -0.46
HLA-DMB-261ENST00000487996 PRPF38AQ8NAV1 312 aaKnown RBP12.2□□□□□ -0.46
HLA-DMB-261ENST00000487996 CCDC148Q8NFR7 591 aa12.2□□□□□ -0.46
HLA-DMB-261ENST00000487996 NUP88Q99567 741 aaPredicted RBP12.2□□□□□ -0.46
HLA-DMB-261ENST00000487996 TANGO6Q9C0B7 1094 aa12.2□□□□□ -0.46
HLA-DMB-261ENST00000487996 VPS37CA5D8V6 355 aaPredicted RBP12.19□□□□□ -0.46
HLA-DMB-261ENST00000487996 PPFIA3O75145 1194 aa12.19□□□□□ -0.46
HLA-DMB-261ENST00000487996 HUNKP57058 714 aa12.19□□□□□ -0.46
HLA-DMB-261ENST00000487996 PABPC4Q13310 644 aaKnown RBP eCLIP12.19□□□□□ -0.46
HLA-DMB-261ENST00000487996 SAFBQ15424 915 aaKnown RBP eCLIP12.19□□□□□ -0.46
HLA-DMB-261ENST00000487996 TTBK2Q6IQ55 1244 aa12.19□□□□□ -0.46
HLA-DMB-261ENST00000487996 HOMER1Q86YM7 354 aa12.19□□□□□ -0.46
HLA-DMB-261ENST00000487996 FBXO18Q8NFZ0 1043 aa12.19□□□□□ -0.46
HLA-DMB-261ENST00000487996 SLF1Q9BQI6 1058 aa12.19□□□□□ -0.46
HLA-DMB-261ENST00000487996 RPAP3Q9H6T3 665 aaPredicted RBP12.19□□□□□ -0.46
HLA-DMB-261ENST00000487996 JMJD4Q9H9V9 463 aa12.19□□□□□ -0.46
HLA-DMB-261ENST00000487996 VAT1LQ9HCJ6 419 aa12.19□□□□□ -0.46
HLA-DMB-261ENST00000487996 BRMS1Q9HCU9 246 aa12.19□□□□□ -0.46
HLA-DMB-261ENST00000487996 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.19□□□□□ -0.46
HLA-DMB-261ENST00000487996 ATP6V1DQ9Y5K8 247 aa12.19□□□□□ -0.46
HLA-DMB-261ENST00000487996 MYPNQ86TC9 1320 aa12.18□□□□□ -0.46
HLA-DMB-261ENST00000487996 USP17L15C9J2P7 530 aa12.18□□□□□ -0.46
HLA-DMB-261ENST00000487996 USP17L13C9JLJ4 530 aa12.18□□□□□ -0.46
HLA-DMB-261ENST00000487996 USP17L11C9JVI0 530 aa12.18□□□□□ -0.46
HLA-DMB-261ENST00000487996 USP17L18D6R9N7 530 aa12.18□□□□□ -0.46
HLA-DMB-261ENST00000487996 USP17L22D6RA61 530 aa12.18□□□□□ -0.46
HLA-DMB-261ENST00000487996 USP17L17D6RBQ6 530 aa12.18□□□□□ -0.46
HLA-DMB-261ENST00000487996 USP17L19D6RCP7 530 aa12.18□□□□□ -0.46
HLA-DMB-261ENST00000487996 USP17L20D6RJB6 530 aa12.18□□□□□ -0.46
HLA-DMB-261ENST00000487996 FLOT1O75955 427 aa12.18□□□□□ -0.46
HLA-DMB-261ENST00000487996 CALML3P27482 149 aa12.18□□□□□ -0.46
HLA-DMB-261ENST00000487996 SLC16A2P36021 539 aa12.18□□□□□ -0.46
HLA-DMB-261ENST00000487996 GTF2A2P52657 109 aa12.18□□□□□ -0.46
HLA-DMB-261ENST00000487996 USP17L24Q0WX57 530 aa12.18□□□□□ -0.46
HLA-DMB-261ENST00000487996 PKN1Q16512 942 aa12.18□□□□□ -0.46
HLA-DMB-261ENST00000487996 KIAA1755Q5JYT7 1200 aa12.18□□□□□ -0.46
HLA-DMB-261ENST00000487996 GALNT17Q6IS24 598 aa12.18□□□□□ -0.46
HLA-DMB-261ENST00000487996 PPP1R18Q6NYC8 613 aa12.18□□□□□ -0.46
HLA-DMB-261ENST00000487996 MTMR8Q96EF0 704 aa12.18□□□□□ -0.46
HLA-DMB-261ENST00000487996 PIGSQ96S52 555 aa12.18□□□□□ -0.46
HLA-DMB-261ENST00000487996 PRR12Q9ULL5 1215 aa12.18□□□□□ -0.46
HLA-DMB-261ENST00000487996 LOC285556D6RIA3 1793 aa12.18□□□□□ -0.46
HLA-DMB-261ENST00000487996 BRD1O95696 1058 aa12.17□□□□□ -0.46
HLA-DMB-261ENST00000487996 ZSCAN22P10073 491 aaPredicted RBP12.17□□□□□ -0.46
HLA-DMB-261ENST00000487996 CETPP11597 493 aa12.17□□□□□ -0.46
HLA-DMB-261ENST00000487996 CDC37Q16543 378 aaPredicted RBP12.17□□□□□ -0.46
HLA-DMB-261ENST00000487996 HEATR3Q7Z4Q2 680 aa12.17□□□□□ -0.46
HLA-DMB-261ENST00000487996 SAPCD2Q86UD0 394 aa12.17□□□□□ -0.46
HLA-DMB-261ENST00000487996 PIBF1Q8WXW3 757 aa12.17□□□□□ -0.46
HLA-DMB-261ENST00000487996 KIFC2Q96AC6 838 aa12.17□□□□□ -0.46
HLA-DMB-261ENST00000487996 WNK4Q96J92 1243 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms