RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 SEPT9Q9UHD8 586 aaPredicted RBP16.86■□□□□ 0.29
PKD1-220ENST00000487932 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.86■□□□□ 0.29
PKD1-220ENST00000487932 SOS1Q07889 1333 aaPredicted RBP16.86■□□□□ 0.29
PKD1-220ENST00000487932 MX2P20592 715 aa16.86■□□□□ 0.29
PKD1-220ENST00000487932 MTX1Q13505 466 aa16.86■□□□□ 0.29
PKD1-220ENST00000487932 PHLDB2Q86SQ0 1253 aa16.86■□□□□ 0.29
PKD1-220ENST00000487932 AP5M1Q9H0R1 490 aa16.86■□□□□ 0.29
PKD1-220ENST00000487932 FIS1Q9Y3D6 152 aa16.86■□□□□ 0.29
PKD1-220ENST00000487932 RIMS2Q9UQ26 1411 aa16.86■□□□□ 0.29
PKD1-220ENST00000487932 BUB1O43683 1085 aa16.86■□□□□ 0.29
PKD1-220ENST00000487932 TSNAXIP1Q2TAA8 658 aa16.86■□□□□ 0.29
PKD1-220ENST00000487932 CERKLQ49MI3 558 aaPredicted RBP16.86■□□□□ 0.29
PKD1-220ENST00000487932 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.86■□□□□ 0.29
PKD1-220ENST00000487932 CDC26Q8NHZ8 85 aa16.86■□□□□ 0.29
PKD1-220ENST00000487932 C1orf112Q9NSG2 853 aa16.86■□□□□ 0.29
PKD1-220ENST00000487932 IPO11Q9UI26 975 aaKnown RBP16.86■□□□□ 0.29
PKD1-220ENST00000487932 A6NJR5 290 aa16.85■□□□□ 0.29
PKD1-220ENST00000487932 MYSM1Q5VVJ2 828 aa16.85■□□□□ 0.29
PKD1-220ENST00000487932 PDZD4Q76G19 769 aaPredicted RBP16.85■□□□□ 0.29
PKD1-220ENST00000487932 PGBD1Q96JS3 809 aa16.85■□□□□ 0.29
PKD1-220ENST00000487932 POLIQ9UNA4 740 aa16.85■□□□□ 0.29
PKD1-220ENST00000487932 YTHDC2Q9H6S0 1430 aaKnown RBP16.85■□□□□ 0.29
PKD1-220ENST00000487932 H7C0C1 242 aa16.85■□□□□ 0.29
PKD1-220ENST00000487932 ATP5OP48047 213 aa16.85■□□□□ 0.29
PKD1-220ENST00000487932 COG7P83436 770 aa16.85■□□□□ 0.29
PKD1-220ENST00000487932 DMP1Q13316 513 aaPredicted RBP16.85■□□□□ 0.29
PKD1-220ENST00000487932 FAM71BQ8TC56 605 aa16.85■□□□□ 0.29
PKD1-220ENST00000487932 CCDC94Q9BW85 323 aaPredicted RBP16.85■□□□□ 0.29
PKD1-220ENST00000487932 RIC8AQ9NPQ8 531 aa16.85■□□□□ 0.29
PKD1-220ENST00000487932 RTEL1Q9NZ71 1219 aa16.85■□□□□ 0.29
PKD1-220ENST00000487932 PDE6CP51160 858 aa16.85■□□□□ 0.29
PKD1-220ENST00000487932 FBXW4P57775 412 aa16.85■□□□□ 0.29
PKD1-220ENST00000487932 ZBTB33Q86T24 672 aa16.85■□□□□ 0.29
PKD1-220ENST00000487932 TIAM1Q13009 1591 aa16.85■□□□□ 0.29
PKD1-220ENST00000487932 SPECC1L-ADORA2AF8WAN1 911 aa16.85■□□□□ 0.29
PKD1-220ENST00000487932 PNOCQ13519 176 aa16.85■□□□□ 0.29
PKD1-220ENST00000487932 DCAF15Q66K64 600 aa16.85■□□□□ 0.29
PKD1-220ENST00000487932 LZTS2Q9BRK4 669 aa16.85■□□□□ 0.29
PKD1-220ENST00000487932 SFMBT1Q9UHJ3 866 aa16.85■□□□□ 0.29
PKD1-220ENST00000487932 CCPG1Q9ULG6 757 aa16.85■□□□□ 0.29
PKD1-220ENST00000487932 ZNF202O95125 648 aa16.84■□□□□ 0.29
PKD1-220ENST00000487932 PHBP35232 272 aa16.84■□□□□ 0.29
PKD1-220ENST00000487932 CFAP221Q4G0U5 840 aa16.84■□□□□ 0.29
PKD1-220ENST00000487932 CCDC93Q567U6 631 aa16.84■□□□□ 0.29
PKD1-220ENST00000487932 CXorf38Q8TB03 319 aa16.84■□□□□ 0.29
PKD1-220ENST00000487932 GDAP1Q8TB36 358 aa16.84■□□□□ 0.29
PKD1-220ENST00000487932 PANK4Q9NVE7 773 aa16.84■□□□□ 0.29
PKD1-220ENST00000487932 CLNS1AP54105 237 aaKnown RBP16.84■□□□□ 0.29
PKD1-220ENST00000487932 IQCB1Q15051 598 aa16.84■□□□□ 0.29
PKD1-220ENST00000487932 MAIP1Q8WWC4 291 aa16.84■□□□□ 0.29
PKD1-220ENST00000487932 ZKSCAN5Q9Y2L8 839 aa16.84■□□□□ 0.29
PKD1-220ENST00000487932 NVLO15381 856 aaKnown RBP16.84■□□□□ 0.29
PKD1-220ENST00000487932 DNAJC10Q8IXB1 793 aa16.84■□□□□ 0.29
PKD1-220ENST00000487932 TROVE2P10155 538 aaKnown RBP eCLIP16.84■□□□□ 0.29
PKD1-220ENST00000487932 XRCC5P13010 732 aaKnown RBP16.84■□□□□ 0.29
PKD1-220ENST00000487932 KRT71Q3SY84 523 aa16.84■□□□□ 0.29
PKD1-220ENST00000487932 PLEKHM2Q8IWE5 1019 aa16.84■□□□□ 0.29
PKD1-220ENST00000487932 PPM1KQ8N3J5 372 aa16.84■□□□□ 0.29
PKD1-220ENST00000487932 RNF10Q8N5U6 811 aaKnown RBP16.84■□□□□ 0.29
PKD1-220ENST00000487932 HAUS1Q96CS2 278 aa16.84■□□□□ 0.29
PKD1-220ENST00000487932 RAD50Q92878 1312 aa16.84■□□□□ 0.29
PKD1-220ENST00000487932 ZNF449Q6P9G9 518 aa16.84■□□□□ 0.29
PKD1-220ENST00000487932 RUFY4Q6ZNE9 571 aa16.84■□□□□ 0.29
PKD1-220ENST00000487932 P3H4Q92791 437 aa16.84■□□□□ 0.29
PKD1-220ENST00000487932 KCNK3O14649 394 aa16.83■□□□□ 0.29
PKD1-220ENST00000487932 ARMCX5Q6P1M9 558 aa16.83■□□□□ 0.29
PKD1-220ENST00000487932 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.83■□□□□ 0.292e-7■■■■■ 33.8
PKD1-220ENST00000487932 MRPL11Q9Y3B7 192 aaKnown RBP16.83■□□□□ 0.29
PKD1-220ENST00000487932 UHRF1BP1LA0JNW5 1464 aa16.83■□□□□ 0.29
PKD1-220ENST00000487932 METTL23Q86XA0 190 aa16.83■□□□□ 0.29
PKD1-220ENST00000487932 RFX6Q8HWS3 928 aa16.83■□□□□ 0.29
PKD1-220ENST00000487932 SPICE1Q8N0Z3 855 aa16.83■□□□□ 0.29
PKD1-220ENST00000487932 IFIH1Q9BYX4 1025 aaKnown RBP16.83■□□□□ 0.29
PKD1-220ENST00000487932 PLEKHG3A1L390 1219 aa16.83■□□□□ 0.28
PKD1-220ENST00000487932 GOLGA8CPA6NN73 597 aa16.83■□□□□ 0.28
PKD1-220ENST00000487932 STMN1P16949 149 aa16.83■□□□□ 0.28
PKD1-220ENST00000487932 ATP6V1E1P36543 226 aa16.83■□□□□ 0.28
PKD1-220ENST00000487932 STAT1P42224 750 aa16.83■□□□□ 0.28
PKD1-220ENST00000487932 PPARAQ07869 468 aa16.83■□□□□ 0.28
PKD1-220ENST00000487932 TEKT3Q9BXF9 490 aa16.83■□□□□ 0.28
PKD1-220ENST00000487932 UBN2Q6ZU65 1347 aa16.83■□□□□ 0.28
PKD1-220ENST00000487932 PTPN23Q9H3S7 1636 aa16.83■□□□□ 0.28
PKD1-220ENST00000487932 DBN1Q16643 649 aa16.83■□□□□ 0.28
PKD1-220ENST00000487932 FAM160B1Q5W0V3 765 aa16.83■□□□□ 0.28
PKD1-220ENST00000487932 IP6K1Q92551 441 aa16.83■□□□□ 0.28
PKD1-220ENST00000487932 HEXIM1O94992 359 aaKnown RBP16.83■□□□□ 0.28
PKD1-220ENST00000487932 RINT1Q6NUQ1 792 aa16.83■□□□□ 0.28
PKD1-220ENST00000487932 INPP5BP32019 993 aa16.82■□□□□ 0.28
PKD1-220ENST00000487932 SESN3P58005 492 aa16.82■□□□□ 0.28
PKD1-220ENST00000487932 NLRP12P59046 1061 aa16.82■□□□□ 0.28
PKD1-220ENST00000487932 PDCD7Q8N8D1 485 aaKnown RBP16.82■□□□□ 0.28
PKD1-220ENST00000487932 MTRQ99707 1265 aa16.82■□□□□ 0.28
PKD1-220ENST00000487932 HAUS8Q9BT25 410 aa16.82■□□□□ 0.28
PKD1-220ENST00000487932 DPH5Q9H2P9 285 aa16.82■□□□□ 0.28
PKD1-220ENST00000487932 METTL14Q9HCE5 456 aaKnown RBP16.82■□□□□ 0.28
PKD1-220ENST00000487932 VCX3AQ9NNX9 186 aa16.82■□□□□ 0.28
PKD1-220ENST00000487932 RGS16O15492 202 aaPredicted RBP16.82■□□□□ 0.28
PKD1-220ENST00000487932 PAK2Q13177 524 aa16.82■□□□□ 0.28
PKD1-220ENST00000487932 ARHGEF6Q15052 776 aa16.82■□□□□ 0.28
PKD1-220ENST00000487932 CERS3Q8IU89 383 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms