RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 LMCD1Q9NZU5 365 aa7.51□□□□□ -1.21
BRCA1-217ENST00000487825 REV1Q9UBZ9 1251 aa7.51□□□□□ -1.21
BRCA1-217ENST00000487825 KLHL3Q9UH77 587 aa7.51□□□□□ -1.21
BRCA1-217ENST00000487825 POLR3KQ9Y2Y1 108 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-217ENST00000487825 PRDM15P57071 1507 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-217ENST00000487825 KIAA1107Q9UPP5 1409 aa7.51□□□□□ -1.21
BRCA1-217ENST00000487825 NKTRP30414 1462 aaKnown RBP7.5□□□□□ -1.21
BRCA1-217ENST00000487825 GARTP22102 1010 aa7.5□□□□□ -1.21
BRCA1-217ENST00000487825 MRPL58Q14197 206 aaKnown RBP7.5□□□□□ -1.21
BRCA1-217ENST00000487825 TMEM201Q5SNT2 666 aa7.5□□□□□ -1.21
BRCA1-217ENST00000487825 MEX3CQ5U5Q3 659 aaKnown RBP7.5□□□□□ -1.21
BRCA1-217ENST00000487825 FBXL19Q6PCT2 694 aa7.5□□□□□ -1.21
BRCA1-217ENST00000487825 PPP1R13LQ8WUF5 828 aa7.5□□□□□ -1.21
BRCA1-217ENST00000487825 CYB5D2Q8WUJ1 264 aa7.5□□□□□ -1.21
BRCA1-217ENST00000487825 COX4I2Q96KJ9 171 aa7.5□□□□□ -1.21
BRCA1-217ENST00000487825 GGT7Q9UJ14 662 aa7.5□□□□□ -1.21
BRCA1-217ENST00000487825 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.5□□□□□ -1.21
BRCA1-217ENST00000487825 PLEKHH2Q8IVE3 1493 aa7.49□□□□□ -1.21
BRCA1-217ENST00000487825 NHSL1Q5SYE7 1610 aa7.49□□□□□ -1.21
BRCA1-217ENST00000487825 WASH4PA8MWX3 477 aa7.49□□□□□ -1.21
BRCA1-217ENST00000487825 CHURC1-FNTBB4DL54 471 aa7.49□□□□□ -1.21
BRCA1-217ENST00000487825 HTR3BO95264 441 aa7.49□□□□□ -1.21
BRCA1-217ENST00000487825 MPP2Q14168 576 aa7.49□□□□□ -1.21
BRCA1-217ENST00000487825 FAM196AQ6ZSG2 479 aa7.49□□□□□ -1.21
BRCA1-217ENST00000487825 REC114Q7Z4M0 266 aa7.49□□□□□ -1.21
BRCA1-217ENST00000487825 Q96M66 194 aa7.49□□□□□ -1.21
BRCA1-217ENST00000487825 NCOA2Q15596 1464 aa7.49□□□□□ -1.21
BRCA1-217ENST00000487825 CHD2O14647 1828 aaKnown RBP7.48□□□□□ -1.21
BRCA1-217ENST00000487825 EIF4A3P38919 411 aaKnown RBP7.48□□□□□ -1.21
BRCA1-217ENST00000487825 TNNI2P48788 182 aa7.48□□□□□ -1.21
BRCA1-217ENST00000487825 THAP5Q7Z6K1 395 aa7.48□□□□□ -1.21
BRCA1-217ENST00000487825 BCL11AQ9H165 835 aa7.48□□□□□ -1.21
BRCA1-217ENST00000487825 CTNND2Q9UQB3 1225 aa7.48□□□□□ -1.21
BRCA1-217ENST00000487825 ERVK-7P63135 1459 aa7.48□□□□□ -1.21
BRCA1-217ENST00000487825 CAMSAP2Q08AD1 1489 aa7.48□□□□□ -1.21
BRCA1-217ENST00000487825 PRR36Q9H6K5 1346 aa7.48□□□□□ -1.21
BRCA1-217ENST00000487825 CEP152O94986 1710 aa7.47□□□□□ -1.21
BRCA1-217ENST00000487825 DNAJA2O60884 412 aa7.47□□□□□ -1.21
BRCA1-217ENST00000487825 SLFN12Q8IYM2 578 aa7.47□□□□□ -1.21
BRCA1-217ENST00000487825 FLAD1Q8NFF5 587 aa7.47□□□□□ -1.21
BRCA1-217ENST00000487825 BAHD1Q8TBE0 780 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-217ENST00000487825 PIWIL2Q8TC59 973 aaKnown RBP7.47□□□□□ -1.21
BRCA1-217ENST00000487825 SUPT16HQ9Y5B9 1047 aaKnown RBP7.47□□□□□ -1.21
BRCA1-217ENST00000487825 CCDC18Q5T9S5 1454 aa7.47□□□□□ -1.21
BRCA1-217ENST00000487825 GPATCH8Q9UKJ3 1502 aaKnown RBP7.47□□□□□ -1.21
BRCA1-217ENST00000487825 MSH6P52701 1360 aa7.46□□□□□ -1.21
BRCA1-217ENST00000487825 LRRN2O75325 713 aa7.46□□□□□ -1.22
BRCA1-217ENST00000487825 ZNF16P17020 682 aaPredicted RBP7.46□□□□□ -1.22
BRCA1-217ENST00000487825 HNRNPMP52272 730 aaKnown RBP eCLIP7.46□□□□□ -1.22
BRCA1-217ENST00000487825 CWF19L2Q2TBE0 894 aaKnown RBP7.46□□□□□ -1.22
BRCA1-217ENST00000487825 FYB2Q5VWT5 728 aa7.46□□□□□ -1.22
BRCA1-217ENST00000487825 HS2ST1Q7LGA3 356 aa7.46□□□□□ -1.22
BRCA1-217ENST00000487825 CREG2Q8IUH2 290 aa7.46□□□□□ -1.22
BRCA1-217ENST00000487825 PHACTR4Q8IZ21 702 aa7.46□□□□□ -1.22
BRCA1-217ENST00000487825 ZNF296Q8WUU4 475 aaPredicted RBP7.46□□□□□ -1.22
BRCA1-217ENST00000487825 BRMS1Q9HCU9 246 aa7.46□□□□□ -1.22
BRCA1-217ENST00000487825 SLAMF8Q9P0V8 285 aa7.46□□□□□ -1.22
BRCA1-217ENST00000487825 TET3O43151 1660 aa7.46□□□□□ -1.22
BRCA1-217ENST00000487825 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.46□□□□□ -1.22
BRCA1-217ENST00000487825 AFF2P51816 1311 aa7.46□□□□□ -1.22
BRCA1-217ENST00000487825 DHX29Q7Z478 1369 aaKnown RBP7.46□□□□□ -1.22
BRCA1-217ENST00000487825 PIK3C2BO00750 1634 aa7.45□□□□□ -1.22
BRCA1-217ENST00000487825 RTEL1-TNFRSF6BF6WH68 1400 aa7.45□□□□□ -1.22
BRCA1-217ENST00000487825 TPP2P29144 1249 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-217ENST00000487825 CRKP46108 304 aa7.45□□□□□ -1.22
BRCA1-217ENST00000487825 RBM6P78332 1123 aaKnown RBP7.45□□□□□ -1.22
BRCA1-217ENST00000487825 ZSWIM9Q86XI8 627 aa7.45□□□□□ -1.22
BRCA1-217ENST00000487825 POU5F2Q8N7G0 328 aa7.45□□□□□ -1.22
BRCA1-217ENST00000487825 DTWD2Q8NBA8 298 aa7.45□□□□□ -1.22
BRCA1-217ENST00000487825 TMEM87AQ8NBN3 555 aa7.45□□□□□ -1.22
BRCA1-217ENST00000487825 CCDC74BQ96LY2 380 aa7.45□□□□□ -1.22
BRCA1-217ENST00000487825 KIF2CQ99661 725 aa7.45□□□□□ -1.22
BRCA1-217ENST00000487825 DUSP15Q9H1R2 295 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-217ENST00000487825 ADAMTS1Q9UHI8 967 aa7.45□□□□□ -1.22
BRCA1-217ENST00000487825 PCDHB14Q9Y5E9 798 aa7.45□□□□□ -1.22
BRCA1-217ENST00000487825 ARHGAP35Q9NRY4 1499 aa7.44□□□□□ -1.22
BRCA1-217ENST00000487825 GREM1O60565 184 aa7.44□□□□□ -1.22
BRCA1-217ENST00000487825 ESR1P03372 595 aa7.44□□□□□ -1.22
BRCA1-217ENST00000487825 YBX3P16989 372 aaKnown RBP eCLIP7.44□□□□□ -1.227e-6■■■□□ 18.9
BRCA1-217ENST00000487825 LTKP29376 864 aa7.44□□□□□ -1.22
BRCA1-217ENST00000487825 GBP1P32455 592 aa7.44□□□□□ -1.22
BRCA1-217ENST00000487825 KCNMB1Q16558 191 aa7.44□□□□□ -1.22
BRCA1-217ENST00000487825 ZNF648Q5T619 568 aaPredicted RBP7.44□□□□□ -1.22
BRCA1-217ENST00000487825 TMPRSS7Q7RTY8 843 aa7.44□□□□□ -1.22
BRCA1-217ENST00000487825 TMEM40Q8WWA1 233 aa7.44□□□□□ -1.22
BRCA1-217ENST00000487825 ALPK1Q96QP1 1244 aa7.44□□□□□ -1.22
BRCA1-217ENST00000487825 KRTAP9-9Q9BYP9 154 aa7.44□□□□□ -1.22
BRCA1-217ENST00000487825 KRTAP9-4Q9BYQ2 154 aa7.44□□□□□ -1.22
BRCA1-217ENST00000487825 KCNQ5Q9NR82 932 aa7.44□□□□□ -1.22
BRCA1-217ENST00000487825 C19orf73Q9NVV2 129 aa7.44□□□□□ -1.22
BRCA1-217ENST00000487825 UBP1Q9NZI7 540 aa7.44□□□□□ -1.22
BRCA1-217ENST00000487825 KCNH3Q9ULD8 1083 aa7.44□□□□□ -1.22
BRCA1-217ENST00000487825 WASHC2CQ9Y4E1 1318 aa7.44□□□□□ -1.22
BRCA1-217ENST00000487825 MAST1Q9Y2H9 1570 aa7.43□□□□□ -1.22
BRCA1-217ENST00000487825 DNAJC25-GNG10A0A024R161 153 aa7.43□□□□□ -1.22
BRCA1-217ENST00000487825 SLC22A31A6NKX4 558 aa7.43□□□□□ -1.22
BRCA1-217ENST00000487825 KCNA6P17658 529 aa7.43□□□□□ -1.22
BRCA1-217ENST00000487825 AFMP43652 599 aa7.43□□□□□ -1.22
BRCA1-217ENST00000487825 MFAP1P55081 439 aaKnown RBP7.43□□□□□ -1.22
BRCA1-217ENST00000487825 SEZ6Q53EL9 994 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms