RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 XPCQ01831 940 aaPredicted RBP6.55□□□□□ -1.36
SNRNP40-205ENST00000486941 SNW1Q13573 536 aaKnown RBP6.55□□□□□ -1.36
SNRNP40-205ENST00000486941 ZNF605Q86T29 641 aa6.55□□□□□ -1.36
SNRNP40-205ENST00000486941 AEBP1Q8IUX7 1158 aa6.55□□□□□ -1.36
SNRNP40-205ENST00000486941 LILRA2Q8N149 483 aa6.55□□□□□ -1.36
SNRNP40-205ENST00000486941 ASPNQ9BXN1 380 aa6.55□□□□□ -1.36
SNRNP40-205ENST00000486941 HDAC8Q9BY41 377 aa6.55□□□□□ -1.36
SNRNP40-205ENST00000486941 KRTAP9-3Q9BYQ3 159 aa6.55□□□□□ -1.36
SNRNP40-205ENST00000486941 PTPRMP28827 1452 aa6.54□□□□□ -1.36
SNRNP40-205ENST00000486941 NUP153P49790 1475 aaKnown RBP6.54□□□□□ -1.36
SNRNP40-205ENST00000486941 FITM1A5D6W6 292 aa6.54□□□□□ -1.36
SNRNP40-205ENST00000486941 TCAF2A6NFQ2 919 aa6.54□□□□□ -1.36
SNRNP40-205ENST00000486941 INHBBP09529 407 aa6.54□□□□□ -1.36
SNRNP40-205ENST00000486941 POLR2BP30876 1174 aaKnown RBP6.54□□□□□ -1.36
SNRNP40-205ENST00000486941 CRKP46108 304 aa6.54□□□□□ -1.36
SNRNP40-205ENST00000486941 TNNI2P48788 182 aa6.54□□□□□ -1.36
SNRNP40-205ENST00000486941 CEBPAP49715 358 aaPredicted RBP6.54□□□□□ -1.36
SNRNP40-205ENST00000486941 MPP2Q14168 576 aa6.54□□□□□ -1.36
SNRNP40-205ENST00000486941 LCE5AQ5TCM9 118 aa6.54□□□□□ -1.36
SNRNP40-205ENST00000486941 ZPBP2Q6X784 338 aa6.54□□□□□ -1.36
SNRNP40-205ENST00000486941 FAM196AQ6ZSG2 479 aa6.54□□□□□ -1.36
SNRNP40-205ENST00000486941 ERMP1Q7Z2K6 904 aa6.54□□□□□ -1.36
SNRNP40-205ENST00000486941 TMC3Q7Z5M5 1100 aa6.54□□□□□ -1.36
SNRNP40-205ENST00000486941 IRF2BP1Q8IU81 584 aa6.54□□□□□ -1.36
SNRNP40-205ENST00000486941 IRF2BPLQ9H1B7 796 aa6.54□□□□□ -1.36
SNRNP40-205ENST00000486941 KCNQ5Q9NR82 932 aa6.54□□□□□ -1.36
SNRNP40-205ENST00000486941 KBTBD4Q9NVX7 518 aa6.54□□□□□ -1.36
SNRNP40-205ENST00000486941 MINPP1Q9UNW1 487 aa6.54□□□□□ -1.36
SNRNP40-205ENST00000486941 BCORL1Q5H9F3 1711 aa6.53□□□□□ -1.36
SNRNP40-205ENST00000486941 TMEM82A0PJX8 343 aa6.53□□□□□ -1.36
SNRNP40-205ENST00000486941 RGS13O14921 159 aa6.53□□□□□ -1.36
SNRNP40-205ENST00000486941 SORBS3O60504 671 aa6.53□□□□□ -1.36
SNRNP40-205ENST00000486941 GREM1O60565 184 aa6.53□□□□□ -1.36
SNRNP40-205ENST00000486941 ARSHQ5FYA8 562 aa6.53□□□□□ -1.36
SNRNP40-205ENST00000486941 RELL1Q8IUW5 271 aa6.53□□□□□ -1.36
SNRNP40-205ENST00000486941 SIRT2Q8IXJ6 389 aa6.53□□□□□ -1.36
SNRNP40-205ENST00000486941 OXR1Q8N573 874 aa6.53□□□□□ -1.36
SNRNP40-205ENST00000486941 CWC22Q9HCG8 908 aaKnown RBP6.53□□□□□ -1.36
SNRNP40-205ENST00000486941 BRMS1Q9HCU9 246 aa6.53□□□□□ -1.36
SNRNP40-205ENST00000486941 FRMPD1Q5SYB0 1578 aa6.52□□□□□ -1.36
SNRNP40-205ENST00000486941 FHOD3Q2V2M9 1422 aa6.52□□□□□ -1.37
SNRNP40-205ENST00000486941 PATL2C9JE40 543 aaKnown RBP6.52□□□□□ -1.37
SNRNP40-205ENST00000486941 NUAK1O60285 661 aa6.52□□□□□ -1.37
SNRNP40-205ENST00000486941 PEX10O60683 326 aa6.52□□□□□ -1.37
SNRNP40-205ENST00000486941 NMIQ13287 307 aaPredicted RBP6.52□□□□□ -1.37
SNRNP40-205ENST00000486941 KIR3DS1Q14943 382 aa6.52□□□□□ -1.37
SNRNP40-205ENST00000486941 SNAP47Q5SQN1 464 aa6.52□□□□□ -1.37
SNRNP40-205ENST00000486941 NBPF12Q5TAG4 269 aaPredicted RBP6.52□□□□□ -1.37
SNRNP40-205ENST00000486941 CIAPIN1Q6FI81 312 aa6.52□□□□□ -1.37
SNRNP40-205ENST00000486941 NLRX1Q86UT6 975 aa6.52□□□□□ -1.37
SNRNP40-205ENST00000486941 PHACTR4Q8IZ21 702 aa6.52□□□□□ -1.37
SNRNP40-205ENST00000486941 SLC6A17Q9H1V8 727 aa6.52□□□□□ -1.37
SNRNP40-205ENST00000486941 GPR160Q9UJ42 338 aa6.52□□□□□ -1.37
SNRNP40-205ENST00000486941 RICTORQ6R327 1708 aa6.52□□□□□ -1.37
SNRNP40-205ENST00000486941 DENND4BO75064 1496 aaPredicted RBP6.52□□□□□ -1.37
SNRNP40-205ENST00000486941 ARID4BQ4LE39 1312 aaPredicted RBP6.51□□□□□ -1.37
SNRNP40-205ENST00000486941 AKNAQ7Z591 1439 aa6.51□□□□□ -1.37
SNRNP40-205ENST00000486941 EFCAB5A4FU69 1503 aa6.51□□□□□ -1.37
SNRNP40-205ENST00000486941 USP2O75604 605 aaPredicted RBP6.51□□□□□ -1.37
SNRNP40-205ENST00000486941 HOXA5P20719 270 aa6.51□□□□□ -1.37
SNRNP40-205ENST00000486941 RANGAP1P46060 587 aaPredicted RBP6.51□□□□□ -1.37
SNRNP40-205ENST00000486941 SSPNQ14714 243 aa6.51□□□□□ -1.37
SNRNP40-205ENST00000486941 NBPF9Q3BBW0 867 aa6.51□□□□□ -1.37
SNRNP40-205ENST00000486941 SYTL5Q8TDW5 730 aaPredicted RBP6.51□□□□□ -1.37
SNRNP40-205ENST00000486941 PANK1Q8TE04 598 aa6.51□□□□□ -1.37
SNRNP40-205ENST00000486941 FBXO41Q8TF61 875 aa6.51□□□□□ -1.37
SNRNP40-205ENST00000486941 TCTN2Q96GX1 697 aa6.51□□□□□ -1.37
SNRNP40-205ENST00000486941 FOXP3Q9BZS1 431 aa6.51□□□□□ -1.37
SNRNP40-205ENST00000486941 ANTXR1Q9H6X2 564 aa6.51□□□□□ -1.37
SNRNP40-205ENST00000486941 PCDHB14Q9Y5E9 798 aa6.51□□□□□ -1.37
SNRNP40-205ENST00000486941 CFAP74Q9C0B2 1584 aa6.51□□□□□ -1.37
SNRNP40-205ENST00000486941 NCANO14594 1321 aa6.5□□□□□ -1.37
SNRNP40-205ENST00000486941 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.5□□□□□ -1.37
SNRNP40-205ENST00000486941 MADDQ8WXG6 1647 aa6.5□□□□□ -1.37
SNRNP40-205ENST00000486941 FANCAO15360 1455 aa6.5□□□□□ -1.37
SNRNP40-205ENST00000486941 TEX51A0A1B0GUA7 166 aa6.5□□□□□ -1.37
SNRNP40-205ENST00000486941 ATE1O95260 518 aa6.5□□□□□ -1.37
SNRNP40-205ENST00000486941 GBP1P32455 592 aa6.5□□□□□ -1.37
SNRNP40-205ENST00000486941 BUD31P41223 144 aaPredicted RBP6.5□□□□□ -1.37
SNRNP40-205ENST00000486941 BBS9Q3SYG4 887 aa6.5□□□□□ -1.37
SNRNP40-205ENST00000486941 ANKS4BQ8N8V4 417 aa6.5□□□□□ -1.37
SNRNP40-205ENST00000486941 DHX38Q92620 1227 aaKnown RBP6.5□□□□□ -1.37
SNRNP40-205ENST00000486941 HHIPL1Q96JK4 782 aa6.5□□□□□ -1.37
SNRNP40-205ENST00000486941 PLCD4Q9BRC7 762 aa6.5□□□□□ -1.37
SNRNP40-205ENST00000486941 LRRC3Q9BY71 257 aa6.5□□□□□ -1.37
SNRNP40-205ENST00000486941 VTI1BQ9UEU0 232 aa6.5□□□□□ -1.37
SNRNP40-205ENST00000486941 ARHGEF40Q8TER5 1519 aa6.5□□□□□ -1.37
SNRNP40-205ENST00000486941 MAGI2Q86UL8 1455 aa6.49□□□□□ -1.37
SNRNP40-205ENST00000486941 PRRG2O14669 202 aa6.49□□□□□ -1.37
SNRNP40-205ENST00000486941 SDHBP21912 280 aa6.49□□□□□ -1.37
SNRNP40-205ENST00000486941 RPL10P27635 214 aaKnown RBP6.49□□□□□ -1.37
SNRNP40-205ENST00000486941 CLCQ05315 142 aa6.49□□□□□ -1.37
SNRNP40-205ENST00000486941 SNX17Q15036 470 aa6.49□□□□□ -1.37
SNRNP40-205ENST00000486941 OVOS1Q6IE37 1185 aa6.49□□□□□ -1.37
SNRNP40-205ENST00000486941 SPPL2CQ8IUH8 684 aa6.49□□□□□ -1.37
SNRNP40-205ENST00000486941 DAGLBQ8NCG7 672 aa6.49□□□□□ -1.37
SNRNP40-205ENST00000486941 ZNF512BQ96KM6 892 aaPredicted RBP6.49□□□□□ -1.37
SNRNP40-205ENST00000486941 KRTAP4-5Q9BYR2 181 aa6.49□□□□□ -1.37
SNRNP40-205ENST00000486941 EPB41L4AQ9HCS5 686 aaPredicted RBP6.49□□□□□ -1.37
SNRNP40-205ENST00000486941 ADAMTS1Q9UHI8 967 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms