RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 RNF20Q5VTR2 975 aa15.46■□□□□ 0.07
SF1-216ENST00000486867 RASGRP2Q7LDG7 609 aa15.46■□□□□ 0.07
SF1-216ENST00000486867 PLEKHH3Q7Z736 793 aa15.46■□□□□ 0.07
SF1-216ENST00000486867 RALYLQ86SE5 291 aaKnown RBP15.46■□□□□ 0.07
SF1-216ENST00000486867 ABRAQ8N0Z2 381 aa15.46■□□□□ 0.07
SF1-216ENST00000486867 PNMA1Q8ND90 353 aa15.46■□□□□ 0.07
SF1-216ENST00000486867 ZNF333Q96JL9 665 aa15.46■□□□□ 0.07
SF1-216ENST00000486867 UBAC1Q9BSL1 405 aa15.46■□□□□ 0.07
SF1-216ENST00000486867 MROH8Q9H579 483 aa15.46■□□□□ 0.07
SF1-216ENST00000486867 TMEM232C9JQI7 657 aa15.45■□□□□ 0.06
SF1-216ENST00000486867 STRNO43815 780 aa15.45■□□□□ 0.06
SF1-216ENST00000486867 RAD21O60216 631 aa15.45■□□□□ 0.06
SF1-216ENST00000486867 REC8O95072 547 aa15.45■□□□□ 0.06
SF1-216ENST00000486867 HOXC6P09630 235 aa15.45■□□□□ 0.06
SF1-216ENST00000486867 PTPREP23469 700 aa15.45■□□□□ 0.06
SF1-216ENST00000486867 COPB2P35606 906 aa15.45■□□□□ 0.06
SF1-216ENST00000486867 GPATCH4Q5T3I0 446 aaKnown RBP15.45■□□□□ 0.06
SF1-216ENST00000486867 IFFO2Q5TF58 517 aa15.45■□□□□ 0.06
SF1-216ENST00000486867 SLAIN1Q8ND83 568 aa15.45■□□□□ 0.06
SF1-216ENST00000486867 IGDCC4Q8TDY8 1250 aa15.45■□□□□ 0.06
SF1-216ENST00000486867 TEX13BQ9BXU2 312 aa15.45■□□□□ 0.06
SF1-216ENST00000486867 ZNF536O15090 1300 aa15.44■□□□□ 0.06
SF1-216ENST00000486867 WDR19Q8NEZ3 1342 aa15.44■□□□□ 0.06
SF1-216ENST00000486867 ERCC3P19447 782 aa15.44■□□□□ 0.06
SF1-216ENST00000486867 GRK4P32298 578 aa15.44■□□□□ 0.06
SF1-216ENST00000486867 HSPA4P34932 840 aa15.44■□□□□ 0.06
SF1-216ENST00000486867 STAT3P40763 770 aa15.44■□□□□ 0.06
SF1-216ENST00000486867 COL9A3Q14050 684 aaPredicted RBP15.44■□□□□ 0.06
SF1-216ENST00000486867 SLC9C1Q4G0N8 1177 aa15.44■□□□□ 0.06
SF1-216ENST00000486867 KCTD1Q719H9 257 aa15.44■□□□□ 0.06
SF1-216ENST00000486867 RASEFQ8IZ41 740 aa15.44■□□□□ 0.06
SF1-216ENST00000486867 RAET1EQ8TD07 263 aa15.44■□□□□ 0.06
SF1-216ENST00000486867 NUDT12Q9BQG2 462 aa15.44■□□□□ 0.06
SF1-216ENST00000486867 KAT14Q9H8E8 782 aa15.44■□□□□ 0.06
SF1-216ENST00000486867 PRR12Q9ULL5 1215 aa15.44■□□□□ 0.06
SF1-216ENST00000486867 ADCY3O60266 1144 aa15.43■□□□□ 0.06
SF1-216ENST00000486867 ZBED4O75132 1171 aa15.43■□□□□ 0.06
SF1-216ENST00000486867 MCM5P33992 734 aa15.43■□□□□ 0.06
SF1-216ENST00000486867 MAP2K5Q13163 448 aa15.43■□□□□ 0.06
SF1-216ENST00000486867 ASPRV1Q53RT3 343 aa15.43■□□□□ 0.06
SF1-216ENST00000486867 IFIT1BQ5T764 474 aaKnown RBP15.43■□□□□ 0.06
SF1-216ENST00000486867 NBPF11Q86T75 865 aa15.43■□□□□ 0.06
SF1-216ENST00000486867 KIFC2Q96AC6 838 aa15.43■□□□□ 0.06
SF1-216ENST00000486867 RANBP17Q9H2T7 1088 aaKnown RBP15.43■□□□□ 0.06
SF1-216ENST00000486867 ECM2O94769 699 aaPredicted RBP15.42■□□□□ 0.06
SF1-216ENST00000486867 RGS2P41220 211 aa15.42■□□□□ 0.06
SF1-216ENST00000486867 KRT32Q14532 448 aa15.42■□□□□ 0.06
SF1-216ENST00000486867 SART3Q15020 963 aaKnown RBP15.42■□□□□ 0.06
SF1-216ENST00000486867 TTBK2Q6IQ55 1244 aa15.42■□□□□ 0.06
SF1-216ENST00000486867 CCAR1Q8IX12 1150 aaKnown RBP15.42■□□□□ 0.06
SF1-216ENST00000486867 TRMT44Q8IYL2 757 aaKnown RBP15.42■□□□□ 0.06
SF1-216ENST00000486867 TMEM87BQ96K49 555 aa15.42■□□□□ 0.06
SF1-216ENST00000486867 MAP3K14Q99558 947 aa15.42■□□□□ 0.06
SF1-216ENST00000486867 APBA2Q99767 749 aa15.42■□□□□ 0.06
SF1-216ENST00000486867 LY9Q9HBG7 655 aa15.42■□□□□ 0.06
SF1-216ENST00000486867 RIPK3Q9Y572 518 aa15.42■□□□□ 0.06
SF1-216ENST00000486867 IFIT3O14879 490 aaKnown RBP15.41■□□□□ 0.06
SF1-216ENST00000486867 PRC1O43663 620 aa15.41■□□□□ 0.06
SF1-216ENST00000486867 LIFRP42702 1097 aa15.41■□□□□ 0.06
SF1-216ENST00000486867 EXOSC10Q01780 885 aaKnown RBP15.41■□□□□ 0.06
SF1-216ENST00000486867 TROAPQ12815 778 aa15.41■□□□□ 0.06
SF1-216ENST00000486867 CCDC96Q2M329 555 aa15.41■□□□□ 0.06
SF1-216ENST00000486867 MAP3K21Q5TCX8 1036 aa15.41■□□□□ 0.06
SF1-216ENST00000486867 SYDE2Q5VT97 1194 aa15.41■□□□□ 0.06
SF1-216ENST00000486867 SNRNP48Q6IEG0 339 aaKnown RBP15.41■□□□□ 0.06
SF1-216ENST00000486867 SH3TC2Q8TF17 1288 aa15.41■□□□□ 0.06
SF1-216ENST00000486867 USP26Q9BXU7 913 aa15.41■□□□□ 0.06
SF1-216ENST00000486867 SENP2Q9HC62 589 aa15.41■□□□□ 0.06
SF1-216ENST00000486867 IVNS1ABPQ9Y6Y0 642 aa15.41■□□□□ 0.06
SF1-216ENST00000486867 DNAJC25-GNG10A0A024R161 153 aa15.4■□□□□ 0.06
SF1-216ENST00000486867 ERICH2A1L162 156 aa15.4■□□□□ 0.06
SF1-216ENST00000486867 PALM3A6NDB9 673 aaPredicted RBP15.4■□□□□ 0.06
SF1-216ENST00000486867 SH2B2O14492 632 aaPredicted RBP15.4■□□□□ 0.06
SF1-216ENST00000486867 HMGCRP04035 888 aa15.4■□□□□ 0.06
SF1-216ENST00000486867 ZKSCAN1P17029 563 aaPredicted RBP15.4■□□□□ 0.06
SF1-216ENST00000486867 ADORA2AP29274 412 aa15.4■□□□□ 0.06
SF1-216ENST00000486867 PLS1Q14651 629 aa15.4■□□□□ 0.06
SF1-216ENST00000486867 WTAPQ15007 396 aa15.4■□□□□ 0.06
SF1-216ENST00000486867 TKFCQ3LXA3 575 aa15.4■□□□□ 0.06
SF1-216ENST00000486867 ADCK5Q3MIX3 580 aa15.4■□□□□ 0.06
SF1-216ENST00000486867 TMEM67Q5HYA8 995 aa15.4■□□□□ 0.06
SF1-216ENST00000486867 SGMS1Q86VZ5 419 aa15.4■□□□□ 0.06
SF1-216ENST00000486867 TMTC2Q8N394 836 aa15.4■□□□□ 0.06
SF1-216ENST00000486867 CHST13Q8NET6 341 aa15.4■□□□□ 0.06
SF1-216ENST00000486867 TRIB2Q92519 343 aa15.4■□□□□ 0.06
SF1-216ENST00000486867 NEK1Q96PY6 1258 aa15.4■□□□□ 0.06
SF1-216ENST00000486867 RAVER2Q9HCJ3 691 aaKnown RBP15.4■□□□□ 0.06
SF1-216ENST00000486867 GPCPD1Q9NPB8 672 aa15.4■□□□□ 0.06
SF1-216ENST00000486867 FRMPD2Q68DX3 1309 aaPredicted RBP15.4■□□□□ 0.06
SF1-216ENST00000486867 LRRC37A2A6NM11 1700 aa15.4■□□□□ 0.06
SF1-216ENST00000486867 BRCA2P51587 3418 aa15.39■□□□□ 0.05
SF1-216ENST00000486867 ICAM1P05362 532 aa15.39■□□□□ 0.05
SF1-216ENST00000486867 HMGB1P09429 215 aaKnown RBP15.39■□□□□ 0.05
SF1-216ENST00000486867 PARP1P09874 1014 aaKnown RBP15.39■□□□□ 0.05
SF1-216ENST00000486867 FCER1AP12319 257 aa15.39■□□□□ 0.05
SF1-216ENST00000486867 ELNP15502 786 aa15.39■□□□□ 0.05
SF1-216ENST00000486867 SLC16A2P36021 539 aa15.39■□□□□ 0.05
SF1-216ENST00000486867 RGS19P49795 217 aa15.39■□□□□ 0.05
SF1-216ENST00000486867 GRM4Q14833 912 aa15.39■□□□□ 0.05
SF1-216ENST00000486867 SAMD1Q6SPF0 538 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms