RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 hCG_1642624A0A1W2PR95 340 aa11.63□□□□□ -0.55
SRGAP3-207ENST00000485983 IFNB1P01574 187 aa11.63□□□□□ -0.55
SRGAP3-207ENST00000485983 FANCCQ00597 558 aa11.63□□□□□ -0.55
SRGAP3-207ENST00000485983 VSIG1Q86XK7 387 aa11.63□□□□□ -0.55
SRGAP3-207ENST00000485983 NME8Q8N427 588 aa11.63□□□□□ -0.55
SRGAP3-207ENST00000485983 NACC1Q96RE7 527 aa11.63□□□□□ -0.55
SRGAP3-207ENST00000485983 ANAPC5Q9UJX4 755 aa11.63□□□□□ -0.55
SRGAP3-207ENST00000485983 AMFRQ9UKV5 643 aa11.63□□□□□ -0.55
SRGAP3-207ENST00000485983 RNF8O76064 485 aa11.62□□□□□ -0.55
SRGAP3-207ENST00000485983 ZNF202O95125 648 aa11.62□□□□□ -0.55
SRGAP3-207ENST00000485983 KLHL7Q8IXQ5 586 aa11.62□□□□□ -0.55
SRGAP3-207ENST00000485983 THRAP3Q9Y2W1 955 aaKnown RBP11.62□□□□□ -0.55
SRGAP3-207ENST00000485983 COL4A3BPQ9Y5P4 624 aa11.62□□□□□ -0.55
SRGAP3-207ENST00000485983 SYCP2Q9BX26 1530 aa11.62□□□□□ -0.55
SRGAP3-207ENST00000485983 GSTA1P08263 222 aa11.62□□□□□ -0.55
SRGAP3-207ENST00000485983 GSTA2P09210 222 aa11.62□□□□□ -0.55
SRGAP3-207ENST00000485983 CFAP221Q4G0U5 840 aa11.62□□□□□ -0.55
SRGAP3-207ENST00000485983 ARMCX5Q6P1M9 558 aa11.62□□□□□ -0.55
SRGAP3-207ENST00000485983 NOP9Q86U38 636 aaKnown RBP11.62□□□□□ -0.55
SRGAP3-207ENST00000485983 BLIDQ8IZY5 108 aa11.62□□□□□ -0.55
SRGAP3-207ENST00000485983 LRRC47Q8N1G4 583 aaKnown RBP11.62□□□□□ -0.55
SRGAP3-207ENST00000485983 DSCC1Q9BVC3 393 aa11.62□□□□□ -0.55
SRGAP3-207ENST00000485983 AKT3Q9Y243 479 aa11.62□□□□□ -0.55
SRGAP3-207ENST00000485983 GYG1P46976 350 aa11.62□□□□□ -0.55
SRGAP3-207ENST00000485983 SMC5Q8IY18 1101 aa11.62□□□□□ -0.55
SRGAP3-207ENST00000485983 RYBPQ8N488 228 aaPredicted RBP11.62□□□□□ -0.55
SRGAP3-207ENST00000485983 ZSCAN10Q96SZ4 725 aaPredicted RBP11.62□□□□□ -0.55
SRGAP3-207ENST00000485983 ZKSCAN5Q9Y2L8 839 aa11.62□□□□□ -0.55
SRGAP3-207ENST00000485983 POLA2Q14181 598 aa11.62□□□□□ -0.55
SRGAP3-207ENST00000485983 ANKRD20A3Q5VUR7 823 aa11.62□□□□□ -0.55
SRGAP3-207ENST00000485983 GALNT17Q6IS24 598 aa11.62□□□□□ -0.55
SRGAP3-207ENST00000485983 RRAGAQ7L523 313 aa11.62□□□□□ -0.55
SRGAP3-207ENST00000485983 PNMA1Q8ND90 353 aa11.62□□□□□ -0.55
SRGAP3-207ENST00000485983 U2AF1L4Q8WU68 220 aaKnown RBP11.62□□□□□ -0.55
SRGAP3-207ENST00000485983 KRT12Q99456 494 aa11.62□□□□□ -0.55
SRGAP3-207ENST00000485983 TRIM56Q9BRZ2 755 aaKnown RBP11.62□□□□□ -0.55
SRGAP3-207ENST00000485983 SEPT10Q9P0V9 454 aa11.62□□□□□ -0.55
SRGAP3-207ENST00000485983 SLC12A6Q9UHW9 1150 aa11.62□□□□□ -0.55
SRGAP3-207ENST00000485983 KLRF2D3W0D1 207 aa11.62□□□□□ -0.55
SRGAP3-207ENST00000485983 PPEF1O14829 653 aaPredicted RBP11.62□□□□□ -0.55
SRGAP3-207ENST00000485983 PHBP35232 272 aa11.62□□□□□ -0.55
SRGAP3-207ENST00000485983 EVCP57679 992 aa11.62□□□□□ -0.55
SRGAP3-207ENST00000485983 PRPSAP1Q14558 356 aa11.62□□□□□ -0.55
SRGAP3-207ENST00000485983 ATP6V0A1Q93050 837 aa11.62□□□□□ -0.55
SRGAP3-207ENST00000485983 ADAMTS12P58397 1594 aa11.61□□□□□ -0.55
SRGAP3-207ENST00000485983 DLATP10515 647 aaKnown RBP11.61□□□□□ -0.55
SRGAP3-207ENST00000485983 LMNB1P20700 586 aa11.61□□□□□ -0.55
SRGAP3-207ENST00000485983 NLRP12P59046 1061 aa11.61□□□□□ -0.55
SRGAP3-207ENST00000485983 MTMR3Q13615 1198 aa11.61□□□□□ -0.55
SRGAP3-207ENST00000485983 SH2D4BQ5SQS7 431 aa11.61□□□□□ -0.55
SRGAP3-207ENST00000485983 ARHGEF2Q92974 986 aaKnown RBP11.61□□□□□ -0.55
SRGAP3-207ENST00000485983 RILPQ96NA2 401 aa11.61□□□□□ -0.55
SRGAP3-207ENST00000485983 RAB17Q9H0T7 212 aa11.61□□□□□ -0.55
SRGAP3-207ENST00000485983 KIF9Q9HAQ2 790 aa11.61□□□□□ -0.55
SRGAP3-207ENST00000485983 NLRC4Q9NPP4 1024 aa11.61□□□□□ -0.55
SRGAP3-207ENST00000485983 PLCB1Q9NQ66 1216 aa11.61□□□□□ -0.55
SRGAP3-207ENST00000485983 SLC8A2Q9UPR5 921 aa11.61□□□□□ -0.55
SRGAP3-207ENST00000485983 NFE2L3Q9Y4A8 694 aa11.61□□□□□ -0.55
SRGAP3-207ENST00000485983 A6NNZ2 444 aa11.61□□□□□ -0.55
SRGAP3-207ENST00000485983 S100BP04271 92 aaPredicted RBP11.61□□□□□ -0.55
SRGAP3-207ENST00000485983 BCAMP50895 628 aa11.61□□□□□ -0.55
SRGAP3-207ENST00000485983 PDE6CP51160 858 aa11.61□□□□□ -0.55
SRGAP3-207ENST00000485983 PAK2Q13177 524 aa11.61□□□□□ -0.55
SRGAP3-207ENST00000485983 TUBB8Q3ZCM7 444 aa11.61□□□□□ -0.55
SRGAP3-207ENST00000485983 FAM182BQ5T319 152 aa11.61□□□□□ -0.55
SRGAP3-207ENST00000485983 CHMP6Q96FZ7 201 aa11.61□□□□□ -0.55
SRGAP3-207ENST00000485983 ARMCX3Q9UH62 379 aaPredicted RBP11.61□□□□□ -0.55
SRGAP3-207ENST00000485983 BAG5Q9UL15 447 aa11.61□□□□□ -0.55
SRGAP3-207ENST00000485983 STK25O00506 426 aa11.61□□□□□ -0.55
SRGAP3-207ENST00000485983 USPL1Q5W0Q7 1092 aa11.61□□□□□ -0.55
SRGAP3-207ENST00000485983 B4GALNT4Q76KP1 1039 aa11.61□□□□□ -0.55
SRGAP3-207ENST00000485983 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.61□□□□□ -0.55
SRGAP3-207ENST00000485983 LSM14BQ9BX40 385 aaKnown RBP11.61□□□□□ -0.55
SRGAP3-207ENST00000485983 FAM207AQ9NSI2 230 aaPredicted RBP11.61□□□□□ -0.55
SRGAP3-207ENST00000485983 SNX14Q9Y5W7 946 aa11.61□□□□□ -0.55
SRGAP3-207ENST00000485983 EDC4Q6P2E9 1401 aaKnown RBP11.61□□□□□ -0.55
SRGAP3-207ENST00000485983 PSDA5PKW4 1024 aaPredicted RBP11.61□□□□□ -0.55
SRGAP3-207ENST00000485983 A6NJR5 290 aa11.61□□□□□ -0.55
SRGAP3-207ENST00000485983 SEMA3EO15041 775 aa11.61□□□□□ -0.55
SRGAP3-207ENST00000485983 ELF1P32519 619 aa11.61□□□□□ -0.55
SRGAP3-207ENST00000485983 LONRF2Q1L5Z9 754 aa11.61□□□□□ -0.55
SRGAP3-207ENST00000485983 NEK8Q86SG6 692 aa11.61□□□□□ -0.55
SRGAP3-207ENST00000485983 MAP7D3Q8IWC1 876 aa11.61□□□□□ -0.55
SRGAP3-207ENST00000485983 GRK7Q8WTQ7 553 aa11.61□□□□□ -0.55
SRGAP3-207ENST00000485983 GCNAQ96QF7 691 aa11.61□□□□□ -0.55
SRGAP3-207ENST00000485983 ATF5Q9Y2D1 282 aaPredicted RBP11.61□□□□□ -0.55
SRGAP3-207ENST00000485983 ATP5JP18859 108 aa11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 ZBTB38Q8NAP3 1195 aaPredicted RBP11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 SLC17A8Q8NDX2 589 aa11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 IFT122Q9HBG6 1241 aa11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 FAM8A1Q9UBU6 413 aa11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 DDX25Q9UHL0 483 aaKnown RBP11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 CPSF3Q9UKF6 684 aaKnown RBP11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 USP19O94966 1318 aa11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 PLEKHG3A1L390 1219 aa11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 ZBTB7BO15156 539 aaPredicted RBP11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 KRT3P12035 628 aa11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 TECP42680 631 aa11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 SLC7A3Q8WY07 619 aa11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 BLZF1Q9H2G9 400 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms