RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 GOPCQ9HD26 462 aa13.12□□□□□ -0.31
SND1-212ENST00000485871 GPCPD1Q9NPB8 672 aa13.12□□□□□ -0.31
SND1-212ENST00000485871 EMILIN3Q9NT22 766 aa13.12□□□□□ -0.31
SND1-212ENST00000485871 A0A0G2JMZ2 1700 aa13.11□□□□□ -0.31
SND1-212ENST00000485871 USP17L10C9JJH3 530 aa13.11□□□□□ -0.31
SND1-212ENST00000485871 CA12O43570 354 aa13.11□□□□□ -0.31
SND1-212ENST00000485871 STX6O43752 255 aa13.11□□□□□ -0.31
SND1-212ENST00000485871 DEXIO95424 95 aa13.11□□□□□ -0.31
SND1-212ENST00000485871 BMP3P12645 472 aa13.11□□□□□ -0.31
SND1-212ENST00000485871 BACE1P56817 501 aa13.11□□□□□ -0.31
SND1-212ENST00000485871 FKBP1BP68106 108 aa13.11□□□□□ -0.31
SND1-212ENST00000485871 SPP2Q13103 211 aa13.11□□□□□ -0.31
SND1-212ENST00000485871 MTMR2Q13614 643 aa13.11□□□□□ -0.31
SND1-212ENST00000485871 SH3D19Q5HYK7 790 aa13.11□□□□□ -0.31
SND1-212ENST00000485871 CST9Q5W186 159 aa13.11□□□□□ -0.31
SND1-212ENST00000485871 LARP1BQ659C4 914 aaKnown RBP13.11□□□□□ -0.31
SND1-212ENST00000485871 KCTD1Q719H9 257 aa13.11□□□□□ -0.31
SND1-212ENST00000485871 ARMC9Q7Z3E5 817 aa13.11□□□□□ -0.31
SND1-212ENST00000485871 CNKSR2Q8WXI2 1034 aa13.11□□□□□ -0.31
SND1-212ENST00000485871 ALG1Q9BT22 464 aa13.11□□□□□ -0.31
SND1-212ENST00000485871 PICK1Q9NRD5 415 aa13.11□□□□□ -0.31
SND1-212ENST00000485871 GJB4Q9NTQ9 266 aa13.11□□□□□ -0.31
SND1-212ENST00000485871 ZHX2Q9Y6X8 837 aa13.11□□□□□ -0.31
SND1-212ENST00000485871 V9GY48 417 aaPredicted RBP13.11□□□□□ -0.31
SND1-212ENST00000485871 hCG_1642624A0A1W2PR95 340 aa13.1□□□□□ -0.31
SND1-212ENST00000485871 PLA2G6O60733 806 aa13.1□□□□□ -0.31
SND1-212ENST00000485871 AOC2O75106 756 aa13.1□□□□□ -0.31
SND1-212ENST00000485871 PDCP20941 246 aa13.1□□□□□ -0.31
SND1-212ENST00000485871 ZYXQ15942 572 aaKnown RBP13.1□□□□□ -0.31
SND1-212ENST00000485871 PFKFB3Q16875 520 aaPredicted RBP13.1□□□□□ -0.31
SND1-212ENST00000485871 CCDC96Q2M329 555 aa13.1□□□□□ -0.31
SND1-212ENST00000485871 ERO1BQ86YB8 467 aa13.1□□□□□ -0.31
SND1-212ENST00000485871 TRIM22Q8IYM9 498 aa13.1□□□□□ -0.31
SND1-212ENST00000485871 SPICE1Q8N0Z3 855 aa13.1□□□□□ -0.31
SND1-212ENST00000485871 FAM184AQ8NB25 1140 aa13.1□□□□□ -0.31
SND1-212ENST00000485871 LPAR1Q92633 364 aa13.1□□□□□ -0.31
SND1-212ENST00000485871 ELP3Q9H9T3 547 aa13.1□□□□□ -0.31
SND1-212ENST00000485871 JMJD4Q9H9V9 463 aa13.1□□□□□ -0.31
SND1-212ENST00000485871 GBA2Q9HCG7 927 aaPredicted RBP13.1□□□□□ -0.31
SND1-212ENST00000485871 CSADQ9Y600 493 aa13.1□□□□□ -0.31
SND1-212ENST00000485871 C19orf81C9J6K1 198 aa13.09□□□□□ -0.31
SND1-212ENST00000485871 WDR46O15213 610 aaKnown RBP13.09□□□□□ -0.31
SND1-212ENST00000485871 SCG2P13521 617 aa13.09□□□□□ -0.31
SND1-212ENST00000485871 PDIA4P13667 645 aaKnown RBP13.09□□□□□ -0.31
SND1-212ENST00000485871 VCAM1P19320 739 aa13.09□□□□□ -0.31
SND1-212ENST00000485871 SLC16A2P36021 539 aa13.09□□□□□ -0.31
SND1-212ENST00000485871 GJA5P36382 358 aa13.09□□□□□ -0.31
SND1-212ENST00000485871 USP14P54578 494 aa13.09□□□□□ -0.31
SND1-212ENST00000485871 PPATQ06203 517 aa13.09□□□□□ -0.31
SND1-212ENST00000485871 FAM83BQ5T0W9 1011 aa13.09□□□□□ -0.31
SND1-212ENST00000485871 TYW1BQ6NUM6 668 aa13.09□□□□□ -0.31
SND1-212ENST00000485871 ADGRF4Q8IZF3 695 aa13.09□□□□□ -0.31
SND1-212ENST00000485871 FBXO18Q8NFZ0 1043 aa13.09□□□□□ -0.31
SND1-212ENST00000485871 FEZ1Q99689 392 aa13.09□□□□□ -0.31
SND1-212ENST00000485871 ZNF408Q9H9D4 720 aa13.09□□□□□ -0.31
SND1-212ENST00000485871 RBM27Q9P2N5 1060 aaKnown RBP13.09□□□□□ -0.31
SND1-212ENST00000485871 KCNH4Q9UQ05 1017 aa13.09□□□□□ -0.31
SND1-212ENST00000485871 KIF3AQ9Y496 699 aa13.09□□□□□ -0.31
SND1-212ENST00000485871 TLL2Q9Y6L7 1015 aa13.09□□□□□ -0.31
SND1-212ENST00000485871 PPP1R11O60927 126 aaPredicted RBP13.08□□□□□ -0.32
SND1-212ENST00000485871 CELF2O95319 508 aaKnown RBP13.08□□□□□ -0.32
SND1-212ENST00000485871 ZSCAN22P10073 491 aaPredicted RBP13.08□□□□□ -0.32
SND1-212ENST00000485871 PPIL2Q13356 520 aa13.08□□□□□ -0.32
SND1-212ENST00000485871 TTLL12Q14166 644 aaPredicted RBP13.08□□□□□ -0.32
SND1-212ENST00000485871 NPY5RQ15761 445 aa13.08□□□□□ -0.32
SND1-212ENST00000485871 OTUD7BQ6GQQ9 843 aa13.08□□□□□ -0.32
SND1-212ENST00000485871 WASF1Q92558 559 aa13.08□□□□□ -0.32
SND1-212ENST00000485871 TNPO1Q92973 898 aaKnown RBP13.08□□□□□ -0.32
SND1-212ENST00000485871 C8orf76Q96K31 380 aa13.08□□□□□ -0.32
SND1-212ENST00000485871 PIGSQ96S52 555 aa13.08□□□□□ -0.32
SND1-212ENST00000485871 PRR12Q9ULL5 1215 aa13.08□□□□□ -0.32
SND1-212ENST00000485871 RBBP6Q7Z6E9 1792 aaKnown RBP13.07□□□□□ -0.32
SND1-212ENST00000485871 A0A0G2JLL6 359 aaPredicted RBP13.07□□□□□ -0.32
SND1-212ENST00000485871 TRIM75PA6NK02 468 aa13.07□□□□□ -0.32
SND1-212ENST00000485871 TMEM232C9JQI7 657 aa13.07□□□□□ -0.32
SND1-212ENST00000485871 STXBP3O00186 592 aa13.07□□□□□ -0.32
SND1-212ENST00000485871 CXCL11O14625 94 aa13.07□□□□□ -0.32
SND1-212ENST00000485871 IRF6O14896 467 aa13.07□□□□□ -0.32
SND1-212ENST00000485871 F13A1P00488 732 aa13.07□□□□□ -0.32
SND1-212ENST00000485871 FOSBP53539 338 aa13.07□□□□□ -0.32
SND1-212ENST00000485871 HMGCS2P54868 508 aa13.07□□□□□ -0.32
SND1-212ENST00000485871 GUCY1B3Q02153 619 aa13.07□□□□□ -0.32
SND1-212ENST00000485871 RESTQ13127 1097 aa13.07□□□□□ -0.32
SND1-212ENST00000485871 MOGSQ13724 837 aa13.07□□□□□ -0.32
SND1-212ENST00000485871 SYDE2Q5VT97 1194 aa13.07□□□□□ -0.32
SND1-212ENST00000485871 KRT40Q6A162 431 aa13.07□□□□□ -0.32
SND1-212ENST00000485871 WWC2Q6AWC2 1192 aa13.07□□□□□ -0.32
SND1-212ENST00000485871 PRRT2Q7Z6L0 340 aaPredicted RBP13.07□□□□□ -0.32
SND1-212ENST00000485871 PHF20Q9BVI0 1012 aa13.07□□□□□ -0.32
SND1-212ENST00000485871 FBXO28Q9NVF7 368 aa13.07□□□□□ -0.32
SND1-212ENST00000485871 VPS37CA5D8V6 355 aaPredicted RBP13.06□□□□□ -0.32
SND1-212ENST00000485871 ZBTB5O15062 677 aa13.06□□□□□ -0.32
SND1-212ENST00000485871 RAD21O60216 631 aa13.06□□□□□ -0.32
SND1-212ENST00000485871 STAT2P52630 851 aa13.06□□□□□ -0.32
SND1-212ENST00000485871 AKAP17AQ02040 695 aaKnown RBP13.06□□□□□ -0.32
SND1-212ENST00000485871 FAM160B2Q86V87 743 aa13.06□□□□□ -0.32
SND1-212ENST00000485871 C2orf69Q8N8R5 385 aa13.06□□□□□ -0.32
SND1-212ENST00000485871 GPKOWQ92917 476 aaPredicted RBP eCLIP13.06□□□□□ -0.32
SND1-212ENST00000485871 OPTNQ96CV9 577 aa13.06□□□□□ -0.32
SND1-212ENST00000485871 RRP36Q96EU6 259 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms