RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 BMP3P12645 472 aa16.34■□□□□ 0.21
SCAF4-206ENST00000485790 AKR1A1P14550 325 aa16.34■□□□□ 0.21
SCAF4-206ENST00000485790 OAZ1P54368 228 aa16.34■□□□□ 0.21
SCAF4-206ENST00000485790 PPARAQ07869 468 aa16.34■□□□□ 0.21
SCAF4-206ENST00000485790 SLFN13Q68D06 897 aa16.34■□□□□ 0.21
SCAF4-206ENST00000485790 SLC17A8Q8NDX2 589 aa16.34■□□□□ 0.21
SCAF4-206ENST00000485790 CHST13Q8NET6 341 aa16.34■□□□□ 0.21
SCAF4-206ENST00000485790 REPS2Q8NFH8 660 aa16.34■□□□□ 0.21
SCAF4-206ENST00000485790 PI4K2BQ8TCG2 481 aa16.34■□□□□ 0.21
SCAF4-206ENST00000485790 FERMT2Q96AC1 680 aa16.34■□□□□ 0.21
SCAF4-206ENST00000485790 EVI5LQ96CN4 794 aa16.34■□□□□ 0.21
SCAF4-206ENST00000485790 EPB41L4AQ9HCS5 686 aaPredicted RBP16.34■□□□□ 0.21
SCAF4-206ENST00000485790 IKQ13123 557 aaPredicted RBP16.33■□□□□ 0.2
SCAF4-206ENST00000485790 FAM47AQ5JRC9 791 aa16.33■□□□□ 0.2
SCAF4-206ENST00000485790 C1orf53Q5VUE5 145 aa16.33■□□□□ 0.2
SCAF4-206ENST00000485790 TICAM2Q86XR7 235 aa16.33■□□□□ 0.2
SCAF4-206ENST00000485790 SEC62Q99442 399 aaKnown RBP16.33■□□□□ 0.2
SCAF4-206ENST00000485790 SPC25Q9HBM1 224 aa16.33■□□□□ 0.2
SCAF4-206ENST00000485790 SLC38A10Q9HBR0 1119 aa16.33■□□□□ 0.2
SCAF4-206ENST00000485790 TACC3Q9Y6A5 838 aa16.33■□□□□ 0.2
SCAF4-206ENST00000485790 ROBO3Q96MS0 1386 aa16.33■□□□□ 0.2
SCAF4-206ENST00000485790 TMEM232C9JQI7 657 aa16.32■□□□□ 0.2
SCAF4-206ENST00000485790 RRP1P56182 461 aaKnown RBP16.32■□□□□ 0.2
SCAF4-206ENST00000485790 AAMPQ13685 434 aa16.32■□□□□ 0.2
SCAF4-206ENST00000485790 MAMDC4Q6UXC1 1216 aa16.32■□□□□ 0.2
SCAF4-206ENST00000485790 ZNF467Q7Z7K2 595 aaPredicted RBP16.32■□□□□ 0.2
SCAF4-206ENST00000485790 FAM160B2Q86V87 743 aa16.32■□□□□ 0.2
SCAF4-206ENST00000485790 NUP133Q8WUM0 1156 aa16.32■□□□□ 0.2
SCAF4-206ENST00000485790 STAG1Q8WVM7 1258 aa16.32■□□□□ 0.2
SCAF4-206ENST00000485790 TSEN34Q9BSV6 310 aaKnown RBP16.32■□□□□ 0.2
SCAF4-206ENST00000485790 RAVER2Q9HCJ3 691 aaKnown RBP16.32■□□□□ 0.2
SCAF4-206ENST00000485790 PRDM5Q9NQX1 630 aaPredicted RBP16.32■□□□□ 0.2
SCAF4-206ENST00000485790 PHF24Q9UPV7 400 aa16.32■□□□□ 0.2
SCAF4-206ENST00000485790 PLXNB2O15031 1838 aa16.31■□□□□ 0.2
SCAF4-206ENST00000485790 SYNGAP1Q96PV0 1343 aa16.31■□□□□ 0.2
SCAF4-206ENST00000485790 TSPY2A6NKD2 308 aa16.31■□□□□ 0.2
SCAF4-206ENST00000485790 ZNF865P0CJ78 1059 aaPredicted RBP16.31■□□□□ 0.2
SCAF4-206ENST00000485790 SLC1A4P43007 532 aa16.31■□□□□ 0.2
SCAF4-206ENST00000485790 STAT2P52630 851 aa16.31■□□□□ 0.2
SCAF4-206ENST00000485790 LRRC47Q8N1G4 583 aaKnown RBP16.31■□□□□ 0.2
SCAF4-206ENST00000485790 OTUD7AQ8TE49 926 aaPredicted RBP16.31■□□□□ 0.2
SCAF4-206ENST00000485790 HELLSQ9NRZ9 838 aa16.31■□□□□ 0.2
SCAF4-206ENST00000485790 STX8Q9UNK0 236 aa16.31■□□□□ 0.2
SCAF4-206ENST00000485790 RIPK3Q9Y572 518 aa16.31■□□□□ 0.2
SCAF4-206ENST00000485790 RANBP6O60518 1105 aaKnown RBP16.3■□□□□ 0.2
SCAF4-206ENST00000485790 PGK1P00558 417 aa16.3■□□□□ 0.2
SCAF4-206ENST00000485790 TAL1P17542 331 aaPredicted RBP16.3■□□□□ 0.2
SCAF4-206ENST00000485790 MCCP23508 829 aa16.3■□□□□ 0.2
SCAF4-206ENST00000485790 TLE2Q04725 743 aa16.3■□□□□ 0.2
SCAF4-206ENST00000485790 TKFCQ3LXA3 575 aa16.3■□□□□ 0.2
SCAF4-206ENST00000485790 TRIM60Q495X7 471 aa16.3■□□□□ 0.2
SCAF4-206ENST00000485790 RCSD1Q6JBY9 416 aa16.3■□□□□ 0.2
SCAF4-206ENST00000485790 GMCL1Q96IK5 515 aa16.3■□□□□ 0.2
SCAF4-206ENST00000485790 ABHD16BQ9H3Z7 469 aa16.3■□□□□ 0.2
SCAF4-206ENST00000485790 DNAJC25-GNG10A0A024R161 153 aa16.29■□□□□ 0.2
SCAF4-206ENST00000485790 PLA2G6O60733 806 aa16.29■□□□□ 0.2
SCAF4-206ENST00000485790 DUSP11O75319 330 aaKnown RBP16.29■□□□□ 0.2
SCAF4-206ENST00000485790 HDAC1Q13547 482 aaPredicted RBP16.29■□□□□ 0.2
SCAF4-206ENST00000485790 ACVR2BQ13705 512 aa16.29■□□□□ 0.2
SCAF4-206ENST00000485790 SNX17Q15036 470 aa16.29■□□□□ 0.2
SCAF4-206ENST00000485790 PCSK9Q8NBP7 692 aaKnown RBP16.29■□□□□ 0.2
SCAF4-206ENST00000485790 VTI1AQ96AJ9 217 aa16.29■□□□□ 0.2
SCAF4-206ENST00000485790 ZHX1Q9UKY1 873 aaPredicted RBP16.29■□□□□ 0.2
SCAF4-206ENST00000485790 MOXD2PA6NHM9 499 aa16.28■□□□□ 0.2
SCAF4-206ENST00000485790 DCDC2CA8MYV0 355 aa16.28■□□□□ 0.2
SCAF4-206ENST00000485790 POTEB2H3BUK9 544 aa16.28■□□□□ 0.2
SCAF4-206ENST00000485790 SNAI1O95863 264 aaPredicted RBP16.28■□□□□ 0.2
SCAF4-206ENST00000485790 ALX1Q15699 326 aa16.28■□□□□ 0.2
SCAF4-206ENST00000485790 MCMDC2Q4G0Z9 681 aa16.28■□□□□ 0.2
SCAF4-206ENST00000485790 FAM109BQ6ICB4 259 aaPredicted RBP16.28■□□□□ 0.2
SCAF4-206ENST00000485790 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.28■□□□□ 0.2
SCAF4-206ENST00000485790 BADQ92934 168 aa16.28■□□□□ 0.2
SCAF4-206ENST00000485790 RWDD1Q9H446 243 aaPredicted RBP16.28■□□□□ 0.2
SCAF4-206ENST00000485790 ACAD9Q9H845 621 aa16.28■□□□□ 0.2
SCAF4-206ENST00000485790 TOMM22Q9NS69 142 aa16.28■□□□□ 0.2
SCAF4-206ENST00000485790 TMEM39AQ9NV64 488 aa16.28■□□□□ 0.2
SCAF4-206ENST00000485790 ANAPC4Q9UJX5 808 aa16.28■□□□□ 0.2
SCAF4-206ENST00000485790 NAV1Q8NEY1 1877 aa16.28■□□□□ 0.2
SCAF4-206ENST00000485790 SZT2Q5T011 3432 aa16.27■□□□□ 0.2
SCAF4-206ENST00000485790 ASB14A6NK59 587 aa16.27■□□□□ 0.2
SCAF4-206ENST00000485790 RAG1P15918 1043 aa16.27■□□□□ 0.2
SCAF4-206ENST00000485790 ACLYP53396 1101 aa16.27■□□□□ 0.2
SCAF4-206ENST00000485790 PDE1AP54750 535 aa16.27■□□□□ 0.2
SCAF4-206ENST00000485790 CTDSPL2Q05D32 466 aa16.27■□□□□ 0.2
SCAF4-206ENST00000485790 GLT1D1Q96MS3 346 aa16.27■□□□□ 0.2
SCAF4-206ENST00000485790 TOX2Q96NM4 488 aa16.27■□□□□ 0.2
SCAF4-206ENST00000485790 CRBNQ96SW2 442 aa16.27■□□□□ 0.2
SCAF4-206ENST00000485790 STARD7Q9NQZ5 370 aa16.27■□□□□ 0.2
SCAF4-206ENST00000485790 HOMER2Q9NSB8 354 aa16.27■□□□□ 0.2
SCAF4-206ENST00000485790 MTMR10Q9NXD2 777 aa16.27■□□□□ 0.2
SCAF4-206ENST00000485790 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.27■□□□□ 0.2
SCAF4-206ENST00000485790 STXBP5LQ9Y2K9 1186 aa16.27■□□□□ 0.2
SCAF4-206ENST00000485790 DDX60LQ5H9U9 1706 aaKnown RBP16.27■□□□□ 0.19
SCAF4-206ENST00000485790 A0A1W2PQ45 241 aaPredicted RBP16.26■□□□□ 0.19
SCAF4-206ENST00000485790 A0A1W2PQY0 241 aa16.26■□□□□ 0.19
SCAF4-206ENST00000485790 CLTBP09497 229 aa16.26■□□□□ 0.19
SCAF4-206ENST00000485790 MFAP1P55081 439 aaKnown RBP16.26■□□□□ 0.19
SCAF4-206ENST00000485790 KCNA10Q16322 511 aa16.26■□□□□ 0.19
SCAF4-206ENST00000485790 GNASQ5JWF2 1037 aa16.26■□□□□ 0.19
SCAF4-206ENST00000485790 CCDC129Q6ZRS4 1044 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 265.8 ms