RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 MAP7Q14244 749 aa5.49□□□□□ -1.53
RTN4-213ENST00000485749 SPRED3Q2MJR0 410 aa5.49□□□□□ -1.53
RTN4-213ENST00000485749 SGO2Q562F6 1265 aa5.49□□□□□ -1.53
RTN4-213ENST00000485749 DUSP27Q5VZP5 1158 aa5.49□□□□□ -1.53
RTN4-213ENST00000485749 LARP1BQ659C4 914 aaKnown RBP5.49□□□□□ -1.53
RTN4-213ENST00000485749 GK5Q6ZS86 529 aa5.49□□□□□ -1.53
RTN4-213ENST00000485749 ABI1Q8IZP0 508 aa5.49□□□□□ -1.53
RTN4-213ENST00000485749 DDX54Q8TDD1 881 aaKnown RBP5.49□□□□□ -1.53
RTN4-213ENST00000485749 ZNF512BQ96KM6 892 aaPredicted RBP5.49□□□□□ -1.53
RTN4-213ENST00000485749 SLC26A8Q96RN1 970 aa5.49□□□□□ -1.53
RTN4-213ENST00000485749 TM9SF2Q99805 663 aa5.49□□□□□ -1.53
RTN4-213ENST00000485749 TNKS2Q9H2K2 1166 aa5.49□□□□□ -1.53
RTN4-213ENST00000485749 CLEC4MQ9H2X3 399 aaPredicted RBP5.49□□□□□ -1.53
RTN4-213ENST00000485749 CASS4Q9NQ75 786 aa5.49□□□□□ -1.53
RTN4-213ENST00000485749 CCDC39Q9UFE4 941 aa5.49□□□□□ -1.53
RTN4-213ENST00000485749 GPN3Q9UHW5 284 aaPredicted RBP5.49□□□□□ -1.53
RTN4-213ENST00000485749 ZMYM5Q9UJ78 669 aa5.49□□□□□ -1.53
RTN4-213ENST00000485749 SYNPO2Q9UMS6 1093 aa5.49□□□□□ -1.53
RTN4-213ENST00000485749 PCDHB5Q9Y5E4 795 aa5.49□□□□□ -1.53
RTN4-213ENST00000485749 MEIS3P2A8K0S8 358 aa5.48□□□□□ -1.53
RTN4-213ENST00000485749 IFRD1O00458 451 aaPredicted RBP5.48□□□□□ -1.53
RTN4-213ENST00000485749 KCNQ2O43526 872 aa5.48□□□□□ -1.53
RTN4-213ENST00000485749 RRP9O43818 475 aaKnown RBP5.48□□□□□ -1.53
RTN4-213ENST00000485749 HMMRO75330 724 aa5.48□□□□□ -1.53
RTN4-213ENST00000485749 RFPL3O75679 317 aa5.48□□□□□ -1.53
RTN4-213ENST00000485749 DDAH1O94760 285 aa5.48□□□□□ -1.53
RTN4-213ENST00000485749 TIAF1O95411 115 aa5.48□□□□□ -1.53
RTN4-213ENST00000485749 FGAP02671 866 aa5.48□□□□□ -1.53
RTN4-213ENST00000485749 F13BP05160 661 aa5.48□□□□□ -1.53
RTN4-213ENST00000485749 LDHCP07864 332 aa5.48□□□□□ -1.53
RTN4-213ENST00000485749 HNRNPUQ00839 825 aaKnown RBP eCLIP5.48□□□□□ -1.53
RTN4-213ENST00000485749 RPL6Q02878 288 aaKnown RBP5.48□□□□□ -1.53
RTN4-213ENST00000485749 SSRP1Q08945 709 aaKnown RBP5.48□□□□□ -1.53
RTN4-213ENST00000485749 VPS72Q15906 364 aa5.48□□□□□ -1.53
RTN4-213ENST00000485749 MSMPQ1L6U9 139 aa5.48□□□□□ -1.53
RTN4-213ENST00000485749 TKFCQ3LXA3 575 aa5.48□□□□□ -1.53
RTN4-213ENST00000485749 CCDC92Q53HC0 331 aaPredicted RBP5.48□□□□□ -1.53
RTN4-213ENST00000485749 TMEM67Q5HYA8 995 aa5.48□□□□□ -1.53
RTN4-213ENST00000485749 ZSCAN30Q86W11 494 aa5.48□□□□□ -1.53
RTN4-213ENST00000485749 NBPF5PQ86XG9 351 aaPredicted RBP5.48□□□□□ -1.53
RTN4-213ENST00000485749 EGFL6Q8IUX8 553 aa5.48□□□□□ -1.53
RTN4-213ENST00000485749 FAM178BQ8IXR5 827 aa5.48□□□□□ -1.53
RTN4-213ENST00000485749 CCDC89Q8N998 374 aa5.48□□□□□ -1.53
RTN4-213ENST00000485749 ENOX1Q8TC92 643 aaKnown RBP5.48□□□□□ -1.53
RTN4-213ENST00000485749 JARID2Q92833 1246 aaPredicted RBP5.48□□□□□ -1.53
RTN4-213ENST00000485749 NINJ1Q92982 152 aa5.48□□□□□ -1.53
RTN4-213ENST00000485749 TBC1D32Q96NH3 1257 aa5.48□□□□□ -1.53
RTN4-213ENST00000485749 IER2Q9BTL4 223 aa5.48□□□□□ -1.53
RTN4-213ENST00000485749 EPN3Q9H201 632 aa5.48□□□□□ -1.53
RTN4-213ENST00000485749 PUF60Q9UHX1 559 aaKnown RBP5.48□□□□□ -1.53
RTN4-213ENST00000485749 ATP8A1Q9Y2Q0 1164 aa5.48□□□□□ -1.53
RTN4-213ENST00000485749 PTCH2Q9Y6C5 1203 aa5.48□□□□□ -1.53
RTN4-213ENST00000485749 LOC100289279A0A1B0GTE1 492 aa5.47□□□□□ -1.53
RTN4-213ENST00000485749 A0A1W2PQH9 124 aa5.47□□□□□ -1.53
RTN4-213ENST00000485749 ALG1L2C9J202 215 aa5.47□□□□□ -1.53
RTN4-213ENST00000485749 SOX1O00570 391 aaPredicted RBP5.47□□□□□ -1.53
RTN4-213ENST00000485749 ASMTLO95671 621 aa5.47□□□□□ -1.53
RTN4-213ENST00000485749 B3GALT4O96024 378 aa5.47□□□□□ -1.53
RTN4-213ENST00000485749 COL6A1P12109 1028 aa5.47□□□□□ -1.53
RTN4-213ENST00000485749 ARNTP27540 789 aa5.47□□□□□ -1.53
RTN4-213ENST00000485749 HOXA10P31260 410 aaPredicted RBP5.47□□□□□ -1.53
RTN4-213ENST00000485749 RAPGEF1Q13905 1077 aa5.47□□□□□ -1.53
RTN4-213ENST00000485749 SEPT6Q14141 434 aa5.47□□□□□ -1.53
RTN4-213ENST00000485749 NCAPHQ15003 741 aa5.47□□□□□ -1.53
RTN4-213ENST00000485749 TM4SF20Q53R12 229 aa5.47□□□□□ -1.53
RTN4-213ENST00000485749 INTS3Q68E01 1043 aaKnown RBP5.47□□□□□ -1.53
RTN4-213ENST00000485749 LLGL2Q6P1M3 1020 aa5.47□□□□□ -1.53
RTN4-213ENST00000485749 ADAMTSL4Q6UY14 1074 aa5.47□□□□□ -1.53
RTN4-213ENST00000485749 EEPD1Q7L9B9 569 aa5.47□□□□□ -1.53
RTN4-213ENST00000485749 TTC30BQ8N4P2 665 aa5.47□□□□□ -1.53
RTN4-213ENST00000485749 SAMD3Q8N6K7 520 aa5.47□□□□□ -1.53
RTN4-213ENST00000485749 MFSD3Q96ES6 412 aa5.47□□□□□ -1.53
RTN4-213ENST00000485749 CWC25Q9NXE8 425 aaPredicted RBP5.47□□□□□ -1.53
RTN4-213ENST00000485749 PCDHB14Q9Y5E9 798 aa5.47□□□□□ -1.53
RTN4-213ENST00000485749 PRR36Q9H6K5 1346 aa5.47□□□□□ -1.53
RTN4-213ENST00000485749 METTL12A8MUP2 240 aa5.46□□□□□ -1.54
RTN4-213ENST00000485749 GOLGA6L6A8MZA4 724 aa5.46□□□□□ -1.54
RTN4-213ENST00000485749 BIN1O00499 593 aa5.46□□□□□ -1.54
RTN4-213ENST00000485749 DIAPH1O60610 1272 aaKnown RBP5.46□□□□□ -1.54
RTN4-213ENST00000485749 HIP1RO75146 1068 aa5.46□□□□□ -1.54
RTN4-213ENST00000485749 CYP11A1P05108 521 aa5.46□□□□□ -1.54
RTN4-213ENST00000485749 GUCY2CP25092 1073 aa5.46□□□□□ -1.54
RTN4-213ENST00000485749 ATICP31939 592 aa5.46□□□□□ -1.54
RTN4-213ENST00000485749 PEX19P40855 299 aa5.46□□□□□ -1.54
RTN4-213ENST00000485749 TRAPPC10P48553 1259 aa5.46□□□□□ -1.54
RTN4-213ENST00000485749 PSMC1P62191 440 aaKnown RBP5.46□□□□□ -1.54
RTN4-213ENST00000485749 SOX4Q06945 474 aaPredicted RBP5.46□□□□□ -1.54
RTN4-213ENST00000485749 NEXNQ0ZGT2 675 aa5.46□□□□□ -1.54
RTN4-213ENST00000485749 MTA1Q13330 715 aa5.46□□□□□ -1.54
RTN4-213ENST00000485749 PPP2R5EQ16537 467 aa5.46□□□□□ -1.54
RTN4-213ENST00000485749 HGSNATQ68CP4 663 aa5.46□□□□□ -1.54
RTN4-213ENST00000485749 SPATC1Q76KD6 591 aa5.46□□□□□ -1.54
RTN4-213ENST00000485749 ZAR1Q86SH2 424 aa5.46□□□□□ -1.54
RTN4-213ENST00000485749 HSCBQ8IWL3 235 aa5.46□□□□□ -1.54
RTN4-213ENST00000485749 STK11IPQ8N1F8 1099 aa5.46□□□□□ -1.54
RTN4-213ENST00000485749 SVIPQ8NHG7 77 aa5.46□□□□□ -1.54
RTN4-213ENST00000485749 CHAC2Q8WUX2 184 aa5.46□□□□□ -1.54
RTN4-213ENST00000485749 EZH1Q92800 747 aaPredicted RBP5.46□□□□□ -1.54
RTN4-213ENST00000485749 ARPC5LQ9BPX5 153 aa5.46□□□□□ -1.54
RTN4-213ENST00000485749 CAAP1Q9H8G2 361 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms