RNA–Protein interactions for RNA: ENST00000485535.5

PLXNB1-218, Transcript of plexin B1, humanhuman

TSL 2

Gene PLXNB1, Length 3,264 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-218ENST00000485535 CALM3P0DP25 149 aa13.94□□□□□ -0.18
PLXNB1-218ENST00000485535 SH3RF1Q7Z6J0 888 aa13.94□□□□□ -0.18
PLXNB1-218ENST00000485535 GDAP1L1Q96MZ0 367 aa13.94□□□□□ -0.18
PLXNB1-218ENST00000485535 GDAQ9Y2T3 454 aa13.94□□□□□ -0.18
PLXNB1-218ENST00000485535 BAZ2BQ9UIF8 2168 aaKnown RBP13.94□□□□□ -0.18
PLXNB1-218ENST00000485535 PNPLA7Q6ZV29 1317 aa13.94□□□□□ -0.18
PLXNB1-218ENST00000485535 RPN1P04843 607 aaKnown RBP13.93□□□□□ -0.18
PLXNB1-218ENST00000485535 FGFR2P21802 821 aa13.93□□□□□ -0.18
PLXNB1-218ENST00000485535 SMARCC1Q92922 1105 aaPredicted RBP13.93□□□□□ -0.18
PLXNB1-218ENST00000485535 TRIM10Q9UDY6 481 aa13.93□□□□□ -0.18
PLXNB1-218ENST00000485535 MTMR7Q9Y216 660 aa13.93□□□□□ -0.18
PLXNB1-218ENST00000485535 NUP188Q5SRE5 1749 aa13.93□□□□□ -0.18
PLXNB1-218ENST00000485535 TRIM21P19474 475 aaKnown RBP13.93□□□□□ -0.18
PLXNB1-218ENST00000485535 HAUS4Q9H6D7 363 aa13.93□□□□□ -0.18
PLXNB1-218ENST00000485535 FAM204AQ9H8W3 233 aa13.93□□□□□ -0.18
PLXNB1-218ENST00000485535 SAR1BQ9Y6B6 198 aa13.93□□□□□ -0.18
PLXNB1-218ENST00000485535 XDHP47989 1333 aa13.93□□□□□ -0.18
PLXNB1-218ENST00000485535 CCDC152Q4G0S7 254 aa13.93□□□□□ -0.18
PLXNB1-218ENST00000485535 CTR9Q6PD62 1173 aa13.93□□□□□ -0.18
PLXNB1-218ENST00000485535 PLIN2Q99541 437 aa13.93□□□□□ -0.18
PLXNB1-218ENST00000485535 HDAC6Q9UBN7 1215 aa13.93□□□□□ -0.18
PLXNB1-218ENST00000485535 WNT7AO00755 349 aa13.92□□□□□ -0.18
PLXNB1-218ENST00000485535 KRT86O43790 486 aa13.92□□□□□ -0.18
PLXNB1-218ENST00000485535 PARP1P09874 1014 aaKnown RBP13.92□□□□□ -0.18
PLXNB1-218ENST00000485535 CYLC1P35663 651 aaPredicted RBP13.92□□□□□ -0.18
PLXNB1-218ENST00000485535 KRT83P78385 493 aa13.92□□□□□ -0.18
PLXNB1-218ENST00000485535 CKAP4Q07065 602 aaKnown RBP13.92□□□□□ -0.18
PLXNB1-218ENST00000485535 PKN1Q16512 942 aa13.92□□□□□ -0.18
PLXNB1-218ENST00000485535 ZNF658Q5TYW1 1059 aaPredicted RBP13.92□□□□□ -0.18
PLXNB1-218ENST00000485535 CCDC47Q96A33 483 aaKnown RBP13.92□□□□□ -0.18
PLXNB1-218ENST00000485535 MED4Q9NPJ6 270 aa13.92□□□□□ -0.18
PLXNB1-218ENST00000485535 JADE2Q9NQC1 790 aa13.92□□□□□ -0.18
PLXNB1-218ENST00000485535 LCMT1Q9UIC8 334 aa13.92□□□□□ -0.18
PLXNB1-218ENST00000485535 AKAP11Q9UKA4 1901 aa13.92□□□□□ -0.18
PLXNB1-218ENST00000485535 H7C1D1 291 aa13.92□□□□□ -0.18
PLXNB1-218ENST00000485535 UBA7P41226 1012 aa13.92□□□□□ -0.18
PLXNB1-218ENST00000485535 ATP2C1P98194 919 aaPredicted RBP13.92□□□□□ -0.18
PLXNB1-218ENST00000485535 POTEAQ6S8J7 498 aa13.92□□□□□ -0.18
PLXNB1-218ENST00000485535 FAM196AQ6ZSG2 479 aa13.92□□□□□ -0.18
PLXNB1-218ENST00000485535 SRLQ86TD4 932 aa13.92□□□□□ -0.18
PLXNB1-218ENST00000485535 AFAP1L1Q8TED9 768 aa13.92□□□□□ -0.18
PLXNB1-218ENST00000485535 TTC26A0AVF1 554 aa13.91□□□□□ -0.18
PLXNB1-218ENST00000485535 RNF225M0QZC1 329 aaPredicted RBP13.91□□□□□ -0.18
PLXNB1-218ENST00000485535 PSMA7O14818 248 aa13.91□□□□□ -0.18
PLXNB1-218ENST00000485535 SEC23AQ15436 765 aa13.91□□□□□ -0.18
PLXNB1-218ENST00000485535 EHBP1Q8NDI1 1231 aa13.91□□□□□ -0.18
PLXNB1-218ENST00000485535 JAKMIP2Q96AA8 810 aa13.91□□□□□ -0.18
PLXNB1-218ENST00000485535 MYO5AQ9Y4I1 1855 aaKnown RBP13.91□□□□□ -0.18
PLXNB1-218ENST00000485535 TRIM49BA6NDI0 452 aa13.91□□□□□ -0.18
PLXNB1-218ENST00000485535 SMIM22K7EJ46 135 aa13.91□□□□□ -0.18
PLXNB1-218ENST00000485535 SRGAP2O75044 1071 aa13.91□□□□□ -0.18
PLXNB1-218ENST00000485535 RNF40O75150 1001 aa13.91□□□□□ -0.18
PLXNB1-218ENST00000485535 ZMYND10O75800 440 aa13.91□□□□□ -0.18
PLXNB1-218ENST00000485535 ARHGAP25P42331 645 aa13.91□□□□□ -0.18
PLXNB1-218ENST00000485535 PRCPP42785 496 aa13.91□□□□□ -0.18
PLXNB1-218ENST00000485535 DYNLL1P63167 89 aaKnown RBP13.91□□□□□ -0.18
PLXNB1-218ENST00000485535 EEF2KMTQ96G04 330 aa13.91□□□□□ -0.18
PLXNB1-218ENST00000485535 BRWD3Q6RI45 1802 aa13.9□□□□□ -0.18
PLXNB1-218ENST00000485535 CCDC194A0A1B0GVG4 234 aa13.9□□□□□ -0.18
PLXNB1-218ENST00000485535 LRRIQ3A6PVS8 624 aaPredicted RBP13.9□□□□□ -0.18
PLXNB1-218ENST00000485535 MTIF2P46199 727 aaKnown RBP13.9□□□□□ -0.18
PLXNB1-218ENST00000485535 PTF1AQ7RTS3 328 aa13.9□□□□□ -0.18
PLXNB1-218ENST00000485535 TFR2Q9UP52 801 aa13.9□□□□□ -0.18
PLXNB1-218ENST00000485535 NID2Q14112 1375 aa13.9□□□□□ -0.18
PLXNB1-218ENST00000485535 MACROD2A1Z1Q3 448 aa13.9□□□□□ -0.18
PLXNB1-218ENST00000485535 CYP19A1P11511 503 aaPredicted RBP13.9□□□□□ -0.18
PLXNB1-218ENST00000485535 SCG2P13521 617 aa13.9□□□□□ -0.18
PLXNB1-218ENST00000485535 MYH8P13535 1937 aa13.9□□□□□ -0.18
PLXNB1-218ENST00000485535 SLC4A8Q2Y0W8 1093 aa13.9□□□□□ -0.18
PLXNB1-218ENST00000485535 FAM47AQ5JRC9 791 aa13.9□□□□□ -0.18
PLXNB1-218ENST00000485535 TMTC3Q6ZXV5 915 aa13.9□□□□□ -0.18
PLXNB1-218ENST00000485535 SLC4A9Q96Q91 983 aa13.9□□□□□ -0.18
PLXNB1-218ENST00000485535 MKRN1Q9UHC7 482 aaKnown RBP13.9□□□□□ -0.18
PLXNB1-218ENST00000485535 TSPY2A6NKD2 308 aa13.89□□□□□ -0.19
PLXNB1-218ENST00000485535 USP17L12C9JPN9 530 aa13.89□□□□□ -0.19
PLXNB1-218ENST00000485535 USP17L21D6R901 530 aa13.89□□□□□ -0.19
PLXNB1-218ENST00000485535 GYG1P46976 350 aa13.89□□□□□ -0.19
PLXNB1-218ENST00000485535 IQCEQ6IPM2 695 aa13.89□□□□□ -0.19
PLXNB1-218ENST00000485535 DTHD1Q6ZMT9 781 aa13.89□□□□□ -0.19
PLXNB1-218ENST00000485535 MB21D1Q8N884 522 aa13.89□□□□□ -0.19
PLXNB1-218ENST00000485535 PLEKHA4Q9H4M7 779 aa13.89□□□□□ -0.19
PLXNB1-218ENST00000485535 LOC102724428A0A0B4J2F2 783 aa13.89□□□□□ -0.19
PLXNB1-218ENST00000485535 ATP1A1P05023 1023 aaKnown RBP13.89□□□□□ -0.19
PLXNB1-218ENST00000485535 IDEP14735 1019 aa13.89□□□□□ -0.19
PLXNB1-218ENST00000485535 ATP6V1AP38606 617 aa13.89□□□□□ -0.19
PLXNB1-218ENST00000485535 USP14P54578 494 aa13.89□□□□□ -0.19
PLXNB1-218ENST00000485535 SIK1P57059 783 aa13.89□□□□□ -0.19
PLXNB1-218ENST00000485535 CHRNDQ07001 517 aa13.89□□□□□ -0.19
PLXNB1-218ENST00000485535 SLC20A2Q08357 652 aa13.89□□□□□ -0.19
PLXNB1-218ENST00000485535 SPA17Q15506 151 aa13.89□□□□□ -0.19
PLXNB1-218ENST00000485535 SUSD4Q5VX71 490 aa13.89□□□□□ -0.19
PLXNB1-218ENST00000485535 CALML3P27482 149 aa13.89□□□□□ -0.19
PLXNB1-218ENST00000485535 TBC1D8BQ0IIM8 1120 aa13.89□□□□□ -0.19
PLXNB1-218ENST00000485535 CAVIN4Q5BKX8 364 aa13.89□□□□□ -0.19
PLXNB1-218ENST00000485535 SHISA4Q96DD7 197 aa13.89□□□□□ -0.19
PLXNB1-218ENST00000485535 DRC1Q96MC2 740 aa13.89□□□□□ -0.19
PLXNB1-218ENST00000485535 MMS19Q96T76 1030 aa13.89□□□□□ -0.19
PLXNB1-218ENST00000485535 HINFPQ9BQA5 517 aa13.89□□□□□ -0.19
PLXNB1-218ENST00000485535 LRRC10BA6NIK2 292 aa13.88□□□□□ -0.19
PLXNB1-218ENST00000485535 DDAH1O94760 285 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms