RNA–Protein interactions for RNA: ENST00000485399.5

NECAB3-211, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 1,373 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-211ENST00000485399 GPCPD1Q9NPB8 672 aa25.31■■□□□ 1.64
NECAB3-211ENST00000485399 EMILIN3Q9NT22 766 aa25.31■■□□□ 1.64
NECAB3-211ENST00000485399 ISY1Q9ULR0 285 aaKnown RBP25.31■■□□□ 1.64
NECAB3-211ENST00000485399 KCNH4Q9UQ05 1017 aa25.31■■□□□ 1.64
NECAB3-211ENST00000485399 FRMPD2Q68DX3 1309 aaPredicted RBP25.31■■□□□ 1.64
NECAB3-211ENST00000485399 BRCA2P51587 3418 aa25.3■■□□□ 1.64
NECAB3-211ENST00000485399 IRF6O14896 467 aa25.3■■□□□ 1.64
NECAB3-211ENST00000485399 GOLGA8HP0CJ92 632 aa25.3■■□□□ 1.64
NECAB3-211ENST00000485399 HMGCS2P54868 508 aa25.3■■□□□ 1.64
NECAB3-211ENST00000485399 NSUN7Q8NE18 718 aaKnown RBP25.3■■□□□ 1.64
NECAB3-211ENST00000485399 WNK4Q96J92 1243 aa25.3■■□□□ 1.64
NECAB3-211ENST00000485399 SMC3Q9UQE7 1217 aa25.3■■□□□ 1.64
NECAB3-211ENST00000485399 PTPRFP10586 1907 aa25.29■■□□□ 1.64
NECAB3-211ENST00000485399 PLEKHA8P1O95397 391 aa25.29■■□□□ 1.64
NECAB3-211ENST00000485399 CTDNEP1O95476 244 aa25.29■■□□□ 1.64
NECAB3-211ENST00000485399 ZBTB48P10074 688 aaPredicted RBP25.29■■□□□ 1.64
NECAB3-211ENST00000485399 HMGN5P82970 282 aaKnown RBP25.29■■□□□ 1.64
NECAB3-211ENST00000485399 KCTD1Q719H9 257 aa25.29■■□□□ 1.64
NECAB3-211ENST00000485399 SRBD1Q8N5C6 995 aaKnown RBP25.29■■□□□ 1.64
NECAB3-211ENST00000485399 SPRYD3Q8NCJ5 442 aa25.29■■□□□ 1.64
NECAB3-211ENST00000485399 FOXD4L1Q9NU39 408 aa25.29■■□□□ 1.64
NECAB3-211ENST00000485399 A0A0G2JLL6 359 aaPredicted RBP25.28■■□□□ 1.64
NECAB3-211ENST00000485399 MANSC4A6NHS7 340 aaPredicted RBP25.28■■□□□ 1.64
NECAB3-211ENST00000485399 SSRP1Q08945 709 aaKnown RBP25.28■■□□□ 1.64
NECAB3-211ENST00000485399 FAM83BQ5T0W9 1011 aa25.28■■□□□ 1.64
NECAB3-211ENST00000485399 PRRT2Q7Z6L0 340 aaPredicted RBP25.28■■□□□ 1.64
NECAB3-211ENST00000485399 IFNL1Q8IU54 200 aa25.28■■□□□ 1.64
NECAB3-211ENST00000485399 SMARCC2Q8TAQ2 1214 aa25.28■■□□□ 1.64
NECAB3-211ENST00000485399 NUP88Q99567 741 aaPredicted RBP25.28■■□□□ 1.64
NECAB3-211ENST00000485399 SPZ1Q9BXG8 430 aa25.28■■□□□ 1.64
NECAB3-211ENST00000485399 PTPDC1A2A3K4 754 aa25.27■■□□□ 1.64
NECAB3-211ENST00000485399 FKTNO75072 461 aa25.27■■□□□ 1.64
NECAB3-211ENST00000485399 GJA5P36382 358 aa25.27■■□□□ 1.64
NECAB3-211ENST00000485399 FUT2Q10981 343 aa25.27■■□□□ 1.64
NECAB3-211ENST00000485399 TRIM22Q8IYM9 498 aa25.27■■□□□ 1.64
NECAB3-211ENST00000485399 CMTR1Q8N1G2 835 aaKnown RBP25.27■■□□□ 1.64
NECAB3-211ENST00000485399 CCDC82Q8N4S0 544 aa25.27■■□□□ 1.64
NECAB3-211ENST00000485399 CHURC1Q8WUH1 139 aa25.27■■□□□ 1.64
NECAB3-211ENST00000485399 TMEM232C9JQI7 657 aa25.26■■□□□ 1.63
NECAB3-211ENST00000485399 IGF2BP3O00425 579 aaKnown RBP eCLIP25.26■■□□□ 1.63
NECAB3-211ENST00000485399 PLA2G6O60733 806 aa25.26■■□□□ 1.63
NECAB3-211ENST00000485399 FMNL1O95466 1100 aaPredicted RBP25.26■■□□□ 1.63
NECAB3-211ENST00000485399 ALDH1A1P00352 501 aa25.26■■□□□ 1.63
NECAB3-211ENST00000485399 VCAM1P19320 739 aa25.26■■□□□ 1.63
NECAB3-211ENST00000485399 INHBEP58166 350 aa25.26■■□□□ 1.63
NECAB3-211ENST00000485399 AKAP17AQ02040 695 aaKnown RBP25.26■■□□□ 1.63
NECAB3-211ENST00000485399 SNAPC2Q13487 334 aa25.26■■□□□ 1.63
NECAB3-211ENST00000485399 TTBK2Q6IQ55 1244 aa25.26■■□□□ 1.63
NECAB3-211ENST00000485399 FBXO46Q6PJ61 603 aaPredicted RBP25.26■■□□□ 1.63
NECAB3-211ENST00000485399 BTNL9Q6UXG8 535 aa25.26■■□□□ 1.63
NECAB3-211ENST00000485399 NBPF11Q86T75 865 aa25.26■■□□□ 1.63
NECAB3-211ENST00000485399 FAM160B2Q86V87 743 aa25.26■■□□□ 1.63
NECAB3-211ENST00000485399 PROCA1Q8NCQ7 364 aaPredicted RBP25.26■■□□□ 1.63
NECAB3-211ENST00000485399 RNF26Q9BY78 433 aaPredicted RBP25.26■■□□□ 1.63
NECAB3-211ENST00000485399 CWC22Q9HCG8 908 aaKnown RBP25.26■■□□□ 1.63
NECAB3-211ENST00000485399 RBM27Q9P2N5 1060 aaKnown RBP25.26■■□□□ 1.63
NECAB3-211ENST00000485399 FEM1BQ9UK73 627 aa25.26■■□□□ 1.63
NECAB3-211ENST00000485399 CNTNAP5Q8WYK1 1306 aa25.25■■□□□ 1.63
NECAB3-211ENST00000485399 STK36Q9NRP7 1315 aa25.25■■□□□ 1.63
NECAB3-211ENST00000485399 JAK2O60674 1132 aa25.25■■□□□ 1.63
NECAB3-211ENST00000485399 STAT2P52630 851 aa25.25■■□□□ 1.63
NECAB3-211ENST00000485399 IKQ13123 557 aaPredicted RBP25.25■■□□□ 1.63
NECAB3-211ENST00000485399 FASTKD5Q7L8L6 764 aaKnown RBP25.25■■□□□ 1.63
NECAB3-211ENST00000485399 PHKBQ93100 1093 aa25.25■■□□□ 1.63
NECAB3-211ENST00000485399 SLC26A6Q9BXS9 759 aa25.25■■□□□ 1.63
NECAB3-211ENST00000485399 UBA5Q9GZZ9 404 aa25.25■■□□□ 1.63
NECAB3-211ENST00000485399 RPAP3Q9H6T3 665 aaPredicted RBP25.25■■□□□ 1.63
NECAB3-211ENST00000485399 RIOX1Q9H6W3 641 aa25.25■■□□□ 1.63
NECAB3-211ENST00000485399 ORC3Q9UBD5 711 aaPredicted RBP25.25■■□□□ 1.63
NECAB3-211ENST00000485399 KIF3AQ9Y496 699 aa25.25■■□□□ 1.63
NECAB3-211ENST00000485399 LOC285556D6RIA3 1793 aa25.24■■□□□ 1.63
NECAB3-211ENST00000485399 PRPF3O43395 683 aaKnown RBP25.24■■□□□ 1.63
NECAB3-211ENST00000485399 GJB2P29033 226 aa25.24■■□□□ 1.63
NECAB3-211ENST00000485399 GTF2A2P52657 109 aa25.24■■□□□ 1.63
NECAB3-211ENST00000485399 MYH6P13533 1939 aa25.24■■□□□ 1.63
NECAB3-211ENST00000485399 GADL1Q6ZQY3 521 aa25.23■■□□□ 1.63
NECAB3-211ENST00000485399 FAM184AQ8NB25 1140 aa25.23■■□□□ 1.63
NECAB3-211ENST00000485399 DDX11Q96FC9 970 aa25.23■■□□□ 1.63
NECAB3-211ENST00000485399 TANGO6Q9C0B7 1094 aa25.23■■□□□ 1.63
NECAB3-211ENST00000485399 CYTH3O43739 400 aa25.22■■□□□ 1.63
NECAB3-211ENST00000485399 SLC16A2P36021 539 aa25.22■■□□□ 1.63
NECAB3-211ENST00000485399 SYDE2Q5VT97 1194 aa25.22■■□□□ 1.63
NECAB3-211ENST00000485399 ADGRF4Q8IZF3 695 aa25.22■■□□□ 1.63
NECAB3-211ENST00000485399 WASF1Q92558 559 aa25.22■■□□□ 1.63
NECAB3-211ENST00000485399 RRP36Q96EU6 259 aaKnown RBP25.22■■□□□ 1.63
NECAB3-211ENST00000485399 CPVLQ9H3G5 476 aa25.22■■□□□ 1.63
NECAB3-211ENST00000485399 V9GY48 417 aaPredicted RBP25.22■■□□□ 1.63
NECAB3-211ENST00000485399 USP17L15C9J2P7 530 aa25.21■■□□□ 1.63
NECAB3-211ENST00000485399 USP17L13C9JLJ4 530 aa25.21■■□□□ 1.63
NECAB3-211ENST00000485399 USP17L11C9JVI0 530 aa25.21■■□□□ 1.63
NECAB3-211ENST00000485399 USP17L18D6R9N7 530 aa25.21■■□□□ 1.63
NECAB3-211ENST00000485399 USP17L22D6RA61 530 aa25.21■■□□□ 1.63
NECAB3-211ENST00000485399 USP17L17D6RBQ6 530 aa25.21■■□□□ 1.63
NECAB3-211ENST00000485399 USP17L19D6RCP7 530 aa25.21■■□□□ 1.63
NECAB3-211ENST00000485399 USP17L20D6RJB6 530 aa25.21■■□□□ 1.63
NECAB3-211ENST00000485399 PPFIA3O75145 1194 aa25.21■■□□□ 1.63
NECAB3-211ENST00000485399 DEXIO95424 95 aa25.21■■□□□ 1.63
NECAB3-211ENST00000485399 CETPP11597 493 aa25.21■■□□□ 1.63
NECAB3-211ENST00000485399 USP17L24Q0WX57 530 aa25.21■■□□□ 1.63
NECAB3-211ENST00000485399 SLC35G1Q2M3R5 365 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms