RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 H3BQV1 296 aa16.82■□□□□ 0.28
LRIF1-202ENST00000485275 KIF3CO14782 793 aa16.82■□□□□ 0.28
LRIF1-202ENST00000485275 VCAM1P19320 739 aa16.82■□□□□ 0.28
LRIF1-202ENST00000485275 HMGCS2P54868 508 aa16.82■□□□□ 0.28
LRIF1-202ENST00000485275 FOXD4L6Q3SYB3 417 aaPredicted RBP16.82■□□□□ 0.28
LRIF1-202ENST00000485275 IFFO2Q5TF58 517 aa16.82■□□□□ 0.28
LRIF1-202ENST00000485275 CHADLQ6NUI6 762 aa16.82■□□□□ 0.28
LRIF1-202ENST00000485275 BTNL9Q6UXG8 535 aa16.82■□□□□ 0.28
LRIF1-202ENST00000485275 FOXD4L3Q6VB84 417 aaPredicted RBP16.82■□□□□ 0.28
LRIF1-202ENST00000485275 TCHHQ07283 1943 aa16.81■□□□□ 0.28
LRIF1-202ENST00000485275 TAL1P17542 331 aaPredicted RBP16.81■□□□□ 0.28
LRIF1-202ENST00000485275 SNAP25P60880 206 aa16.81■□□□□ 0.28
LRIF1-202ENST00000485275 AKAP17AQ02040 695 aaKnown RBP16.81■□□□□ 0.28
LRIF1-202ENST00000485275 CST9Q5W186 159 aa16.81■□□□□ 0.28
LRIF1-202ENST00000485275 WASF1Q92558 559 aa16.81■□□□□ 0.28
LRIF1-202ENST00000485275 AS3MTQ9HBK9 375 aa16.81■□□□□ 0.28
LRIF1-202ENST00000485275 SMCHD1A6NHR9 2005 aa16.81■□□□□ 0.28
LRIF1-202ENST00000485275 SPDYE5A6NIY4 337 aa16.8■□□□□ 0.28
LRIF1-202ENST00000485275 STXBP3O00186 592 aa16.8■□□□□ 0.28
LRIF1-202ENST00000485275 CELF2O95319 508 aaKnown RBP16.8■□□□□ 0.28
LRIF1-202ENST00000485275 MMP1P03956 469 aa16.8■□□□□ 0.28
LRIF1-202ENST00000485275 GJA5P36382 358 aa16.8■□□□□ 0.28
LRIF1-202ENST00000485275 KIF23Q02241 960 aaPredicted RBP16.8■□□□□ 0.28
LRIF1-202ENST00000485275 LPAR1Q92633 364 aa16.8■□□□□ 0.28
LRIF1-202ENST00000485275 RRP36Q96EU6 259 aaKnown RBP16.8■□□□□ 0.28
LRIF1-202ENST00000485275 OTUD5Q96G74 571 aa16.8■□□□□ 0.28
LRIF1-202ENST00000485275 PHF20Q9BVI0 1012 aa16.8■□□□□ 0.28
LRIF1-202ENST00000485275 IRF6O14896 467 aa16.79■□□□□ 0.28
LRIF1-202ENST00000485275 WDR46O15213 610 aaKnown RBP16.79■□□□□ 0.28
LRIF1-202ENST00000485275 STAT2P52630 851 aa16.79■□□□□ 0.28
LRIF1-202ENST00000485275 SYDE2Q5VT97 1194 aa16.79■□□□□ 0.28
LRIF1-202ENST00000485275 ARMC9Q7Z3E5 817 aa16.79■□□□□ 0.28
LRIF1-202ENST00000485275 HEATR3Q7Z4Q2 680 aa16.79■□□□□ 0.28
LRIF1-202ENST00000485275 OXER1Q8TDS5 423 aa16.79■□□□□ 0.28
LRIF1-202ENST00000485275 C12orf42Q96LP6 360 aa16.79■□□□□ 0.28
LRIF1-202ENST00000485275 GPBP1L1Q9HC44 474 aaPredicted RBP16.79■□□□□ 0.28
LRIF1-202ENST00000485275 RBM27Q9P2N5 1060 aaKnown RBP16.79■□□□□ 0.28
LRIF1-202ENST00000485275 PRR12Q9ULL5 1215 aa16.79■□□□□ 0.28
LRIF1-202ENST00000485275 CDC37Q16543 378 aaPredicted RBP16.79■□□□□ 0.28
LRIF1-202ENST00000485275 QRICH1Q2TAL8 776 aa16.79■□□□□ 0.28
LRIF1-202ENST00000485275 GBA2Q9HCG7 927 aaPredicted RBP16.79■□□□□ 0.28
LRIF1-202ENST00000485275 BARHL2Q9NY43 387 aa16.79■□□□□ 0.28
LRIF1-202ENST00000485275 COL11A1P12107 1806 aaPredicted RBP16.78■□□□□ 0.28
LRIF1-202ENST00000485275 ZBTB5O15062 677 aa16.78■□□□□ 0.28
LRIF1-202ENST00000485275 BAG4O95429 457 aaKnown RBP16.78■□□□□ 0.28
LRIF1-202ENST00000485275 USP14P54578 494 aa16.78■□□□□ 0.28
LRIF1-202ENST00000485275 NR5A1Q13285 461 aa16.78■□□□□ 0.28
LRIF1-202ENST00000485275 SH3D19Q5HYK7 790 aa16.78■□□□□ 0.28
LRIF1-202ENST00000485275 CLEC17AQ6ZS10 378 aa16.78■□□□□ 0.28
LRIF1-202ENST00000485275 ERO1BQ86YB8 467 aa16.78■□□□□ 0.28
LRIF1-202ENST00000485275 RGS22Q8NE09 1264 aa16.78■□□□□ 0.28
LRIF1-202ENST00000485275 OPTNQ96CV9 577 aa16.78■□□□□ 0.28
LRIF1-202ENST00000485275 RPAP3Q9H6T3 665 aaPredicted RBP16.78■□□□□ 0.28
LRIF1-202ENST00000485275 PASKQ96RG2 1323 aa16.78■□□□□ 0.28
LRIF1-202ENST00000485275 BTBD18B2RXH4 712 aa16.77■□□□□ 0.28
LRIF1-202ENST00000485275 PPATQ06203 517 aa16.77■□□□□ 0.28
LRIF1-202ENST00000485275 IKQ13123 557 aaPredicted RBP16.77■□□□□ 0.28
LRIF1-202ENST00000485275 NOM1Q5C9Z4 860 aaKnown RBP16.77■□□□□ 0.28
LRIF1-202ENST00000485275 MCTP1Q6DN14 999 aa16.77■□□□□ 0.28
LRIF1-202ENST00000485275 DIS3L2Q8IYB7 885 aaKnown RBP16.77■□□□□ 0.28
LRIF1-202ENST00000485275 COA7Q96BR5 231 aa16.77■□□□□ 0.28
LRIF1-202ENST00000485275 WNK4Q96J92 1243 aa16.77■□□□□ 0.28
LRIF1-202ENST00000485275 SEC63Q9UGP8 760 aaKnown RBP16.77■□□□□ 0.28
LRIF1-202ENST00000485275 PNMA6FA0A0J9YX94 578 aa16.77■□□□□ 0.27
LRIF1-202ENST00000485275 PLA2G6O60733 806 aa16.77■□□□□ 0.27
LRIF1-202ENST00000485275 PDIA4P13667 645 aaKnown RBP16.77■□□□□ 0.27
LRIF1-202ENST00000485275 MOGSQ13724 837 aa16.77■□□□□ 0.27
LRIF1-202ENST00000485275 TRIM29Q14134 588 aa16.77■□□□□ 0.27
LRIF1-202ENST00000485275 EARS2Q5JPH6 523 aaKnown RBP16.77■□□□□ 0.27
LRIF1-202ENST00000485275 TREML2Q5T2D2 321 aa16.77■□□□□ 0.27
LRIF1-202ENST00000485275 TNFRSF25Q93038 417 aa16.77■□□□□ 0.27
LRIF1-202ENST00000485275 KIFC2Q96AC6 838 aa16.77■□□□□ 0.27
LRIF1-202ENST00000485275 KCNH4Q9UQ05 1017 aa16.77■□□□□ 0.27
LRIF1-202ENST00000485275 A0A0G2JMZ2 1700 aa16.76■□□□□ 0.27
LRIF1-202ENST00000485275 A0A0G2JLL6 359 aaPredicted RBP16.76■□□□□ 0.27
LRIF1-202ENST00000485275 FAM205CA6NFA0 338 aa16.76■□□□□ 0.27
LRIF1-202ENST00000485275 C19orf81C9J6K1 198 aa16.76■□□□□ 0.27
LRIF1-202ENST00000485275 U2AF2P26368 475 aaKnown RBP eCLIP16.76■□□□□ 0.273e-8■■□□□ 13.6
LRIF1-202ENST00000485275 DNM1Q05193 864 aaKnown RBP16.76■□□□□ 0.27
LRIF1-202ENST00000485275 PPIL2Q13356 520 aa16.76■□□□□ 0.27
LRIF1-202ENST00000485275 PRRT2Q7Z6L0 340 aaPredicted RBP16.76■□□□□ 0.27
LRIF1-202ENST00000485275 FTOQ9C0B1 505 aaKnown RBP eCLIP16.76■□□□□ 0.27
LRIF1-202ENST00000485275 TANGO6Q9C0B7 1094 aa16.76■□□□□ 0.27
LRIF1-202ENST00000485275 RANBP17Q9H2T7 1088 aaKnown RBP16.76■□□□□ 0.27
LRIF1-202ENST00000485275 FEM1BQ9UK73 627 aa16.76■□□□□ 0.27
LRIF1-202ENST00000485275 FKBP1BP68106 108 aa16.75■□□□□ 0.27
LRIF1-202ENST00000485275 SAMD1Q6SPF0 538 aaPredicted RBP16.75■□□□□ 0.27
LRIF1-202ENST00000485275 SH3GLB2Q9NR46 395 aa16.75■□□□□ 0.27
LRIF1-202ENST00000485275 M0R2N6 131 aa16.74■□□□□ 0.27
LRIF1-202ENST00000485275 FAM160B2Q86V87 743 aa16.74■□□□□ 0.27
LRIF1-202ENST00000485275 RBM46Q8TBY0 533 aaKnown RBP16.74■□□□□ 0.27
LRIF1-202ENST00000485275 RASGRP4Q8TDF6 673 aa16.74■□□□□ 0.27
LRIF1-202ENST00000485275 SLF1Q9BQI6 1058 aa16.74■□□□□ 0.27
LRIF1-202ENST00000485275 CNPY2Q9Y2B0 182 aa16.74■□□□□ 0.27
LRIF1-202ENST00000485275 ZNF536O15090 1300 aa16.74■□□□□ 0.27
LRIF1-202ENST00000485275 FLOT1O75955 427 aa16.74■□□□□ 0.27
LRIF1-202ENST00000485275 NAPAP54920 295 aa16.74■□□□□ 0.27
LRIF1-202ENST00000485275 NLRP5P59047 1200 aa16.74■□□□□ 0.27
LRIF1-202ENST00000485275 NFKBIBQ15653 356 aa16.74■□□□□ 0.27
LRIF1-202ENST00000485275 POTEEQ6S8J3 1075 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms