RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 ZBED4O75132 1171 aa20.85■□□□□ 0.93
SREBF1-213ENST00000485080 PTPREP23469 700 aa20.85■□□□□ 0.93
SREBF1-213ENST00000485080 STAT3P40763 770 aa20.85■□□□□ 0.93
SREBF1-213ENST00000485080 ZNF543Q08ER8 600 aa20.85■□□□□ 0.93
SREBF1-213ENST00000485080 SART3Q15020 963 aaKnown RBP20.85■□□□□ 0.93
SREBF1-213ENST00000485080 GPATCH4Q5T3I0 446 aaKnown RBP20.85■□□□□ 0.93
SREBF1-213ENST00000485080 IFIT1BQ5T764 474 aaKnown RBP20.85■□□□□ 0.93
SREBF1-213ENST00000485080 KCTD1Q719H9 257 aa20.85■□□□□ 0.93
SREBF1-213ENST00000485080 NBPF11Q86T75 865 aa20.85■□□□□ 0.93
SREBF1-213ENST00000485080 ABRAQ8N0Z2 381 aa20.85■□□□□ 0.93
SREBF1-213ENST00000485080 SLAIN1Q8ND83 568 aa20.85■□□□□ 0.93
SREBF1-213ENST00000485080 KIFC2Q96AC6 838 aa20.85■□□□□ 0.93
SREBF1-213ENST00000485080 NUDT12Q9BQG2 462 aa20.85■□□□□ 0.93
SREBF1-213ENST00000485080 TEX13BQ9BXU2 312 aa20.85■□□□□ 0.93
SREBF1-213ENST00000485080 COL11A1P12107 1806 aaPredicted RBP20.85■□□□□ 0.93
SREBF1-213ENST00000485080 PLXNB2O15031 1838 aa20.84■□□□□ 0.93
SREBF1-213ENST00000485080 ECM2O94769 699 aaPredicted RBP20.84■□□□□ 0.93
SREBF1-213ENST00000485080 ERCC3P19447 782 aa20.84■□□□□ 0.93
SREBF1-213ENST00000485080 MCM5P33992 734 aa20.84■□□□□ 0.93
SREBF1-213ENST00000485080 ANTXR2P58335 489 aa20.84■□□□□ 0.93
SREBF1-213ENST00000485080 GRB14Q14449 540 aa20.84■□□□□ 0.93
SREBF1-213ENST00000485080 KRT32Q14532 448 aa20.84■□□□□ 0.93
SREBF1-213ENST00000485080 SLC9C1Q4G0N8 1177 aa20.84■□□□□ 0.93
SREBF1-213ENST00000485080 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.84■□□□□ 0.93
SREBF1-213ENST00000485080 IGDCC4Q8TDY8 1250 aa20.84■□□□□ 0.93
SREBF1-213ENST00000485080 ERICH2A1L162 156 aa20.83■□□□□ 0.93
SREBF1-213ENST00000485080 IFIT3O14879 490 aaKnown RBP20.83■□□□□ 0.93
SREBF1-213ENST00000485080 HOXC6P09630 235 aa20.83■□□□□ 0.93
SREBF1-213ENST00000485080 ZKSCAN1P17029 563 aaPredicted RBP20.83■□□□□ 0.93
SREBF1-213ENST00000485080 GRK4P32298 578 aa20.83■□□□□ 0.93
SREBF1-213ENST00000485080 HSPA4P34932 840 aa20.83■□□□□ 0.93
SREBF1-213ENST00000485080 CCDC96Q2M329 555 aa20.83■□□□□ 0.93
SREBF1-213ENST00000485080 RASGRP2Q7LDG7 609 aa20.83■□□□□ 0.93
SREBF1-213ENST00000485080 ZNF333Q96JL9 665 aa20.83■□□□□ 0.93
SREBF1-213ENST00000485080 PRR12Q9ULL5 1215 aa20.83■□□□□ 0.93
SREBF1-213ENST00000485080 WDR19Q8NEZ3 1342 aa20.82■□□□□ 0.92
SREBF1-213ENST00000485080 ADCY3O60266 1144 aa20.82■□□□□ 0.92
SREBF1-213ENST00000485080 PLS1Q14651 629 aa20.82■□□□□ 0.92
SREBF1-213ENST00000485080 ASPRV1Q53RT3 343 aa20.82■□□□□ 0.92
SREBF1-213ENST00000485080 IFFO2Q5TF58 517 aa20.82■□□□□ 0.92
SREBF1-213ENST00000485080 SAMD1Q6SPF0 538 aaPredicted RBP20.82■□□□□ 0.92
SREBF1-213ENST00000485080 TRMT44Q8IYL2 757 aaKnown RBP20.82■□□□□ 0.92
SREBF1-213ENST00000485080 RASEFQ8IZ41 740 aa20.82■□□□□ 0.92
SREBF1-213ENST00000485080 TMEM87BQ96K49 555 aa20.82■□□□□ 0.92
SREBF1-213ENST00000485080 IVNS1ABPQ9Y6Y0 642 aa20.82■□□□□ 0.92
SREBF1-213ENST00000485080 ZNF236Q9UL36 1845 aa20.81■□□□□ 0.92
SREBF1-213ENST00000485080 RGS2P41220 211 aa20.81■□□□□ 0.92
SREBF1-213ENST00000485080 MAP2K5Q13163 448 aa20.81■□□□□ 0.92
SREBF1-213ENST00000485080 WTAPQ15007 396 aa20.81■□□□□ 0.92
SREBF1-213ENST00000485080 SYDE2Q5VT97 1194 aa20.81■□□□□ 0.92
SREBF1-213ENST00000485080 TTBK2Q6IQ55 1244 aa20.81■□□□□ 0.92
SREBF1-213ENST00000485080 TMTC2Q8N394 836 aa20.81■□□□□ 0.92
SREBF1-213ENST00000485080 RANBP17Q9H2T7 1088 aaKnown RBP20.81■□□□□ 0.92
SREBF1-213ENST00000485080 CWC22Q9HCG8 908 aaKnown RBP20.81■□□□□ 0.92
SREBF1-213ENST00000485080 PNMA2Q9UL42 364 aa20.81■□□□□ 0.92
SREBF1-213ENST00000485080 ZNF536O15090 1300 aa20.8■□□□□ 0.92
SREBF1-213ENST00000485080 PRC1O43663 620 aa20.8■□□□□ 0.92
SREBF1-213ENST00000485080 EIF5BO60841 1220 aaKnown RBP20.8■□□□□ 0.92
SREBF1-213ENST00000485080 HMGB1P09429 215 aaKnown RBP20.8■□□□□ 0.92
SREBF1-213ENST00000485080 LIFRP42702 1097 aa20.8■□□□□ 0.92
SREBF1-213ENST00000485080 IKQ13123 557 aaPredicted RBP20.8■□□□□ 0.92
SREBF1-213ENST00000485080 TMEM67Q5HYA8 995 aa20.8■□□□□ 0.92
SREBF1-213ENST00000485080 SNRNP48Q6IEG0 339 aaKnown RBP20.8■□□□□ 0.92
SREBF1-213ENST00000485080 NCAPG2Q86XI2 1143 aa20.8■□□□□ 0.92
SREBF1-213ENST00000485080 NEK1Q96PY6 1258 aa20.8■□□□□ 0.92
SREBF1-213ENST00000485080 MAP3K14Q99558 947 aa20.8■□□□□ 0.92
SREBF1-213ENST00000485080 APBA2Q99767 749 aa20.8■□□□□ 0.92
SREBF1-213ENST00000485080 ISY1Q9ULR0 285 aaKnown RBP20.8■□□□□ 0.92
SREBF1-213ENST00000485080 MTMR7Q9Y216 660 aa20.8■□□□□ 0.92
SREBF1-213ENST00000485080 CTDP1Q9Y5B0 961 aaPredicted RBP20.8■□□□□ 0.92
SREBF1-213ENST00000485080 FCER1AP12319 257 aa20.79■□□□□ 0.92
SREBF1-213ENST00000485080 TROAPQ12815 778 aa20.79■□□□□ 0.92
SREBF1-213ENST00000485080 TKFCQ3LXA3 575 aa20.79■□□□□ 0.92
SREBF1-213ENST00000485080 CHST3Q7LGC8 479 aa20.79■□□□□ 0.92
SREBF1-213ENST00000485080 CHST13Q8NET6 341 aa20.79■□□□□ 0.92
SREBF1-213ENST00000485080 SH3TC2Q8TF17 1288 aa20.79■□□□□ 0.92
SREBF1-213ENST00000485080 USP26Q9BXU7 913 aa20.79■□□□□ 0.92
SREBF1-213ENST00000485080 LY9Q9HBG7 655 aa20.79■□□□□ 0.92
SREBF1-213ENST00000485080 GPCPD1Q9NPB8 672 aa20.79■□□□□ 0.92
SREBF1-213ENST00000485080 FBXO40Q9UH90 709 aa20.79■□□□□ 0.92
SREBF1-213ENST00000485080 RIPK3Q9Y572 518 aa20.79■□□□□ 0.92
SREBF1-213ENST00000485080 FRMPD2Q68DX3 1309 aaPredicted RBP20.78■□□□□ 0.92
SREBF1-213ENST00000485080 CCDC85CA6NKD9 419 aa20.78■□□□□ 0.92
SREBF1-213ENST00000485080 SH2B2O14492 632 aaPredicted RBP20.78■□□□□ 0.92
SREBF1-213ENST00000485080 IGHA2P01877 340 aa20.78■□□□□ 0.92
SREBF1-213ENST00000485080 PARP1P09874 1014 aaKnown RBP20.78■□□□□ 0.92
SREBF1-213ENST00000485080 EXOSC10Q01780 885 aaKnown RBP20.78■□□□□ 0.92
SREBF1-213ENST00000485080 COL9A3Q14050 684 aaPredicted RBP20.78■□□□□ 0.92
SREBF1-213ENST00000485080 WDR78Q5VTH9 848 aa20.78■□□□□ 0.92
SREBF1-213ENST00000485080 DHX32Q7L7V1 743 aaKnown RBP20.78■□□□□ 0.92
SREBF1-213ENST00000485080 SENP2Q9HC62 589 aa20.78■□□□□ 0.92
SREBF1-213ENST00000485080 RAVER2Q9HCJ3 691 aaKnown RBP20.78■□□□□ 0.92
SREBF1-213ENST00000485080 PALM3A6NDB9 673 aaPredicted RBP20.77■□□□□ 0.92
SREBF1-213ENST00000485080 HMGCRP04035 888 aa20.77■□□□□ 0.92
SREBF1-213ENST00000485080 ICAM1P05362 532 aa20.77■□□□□ 0.92
SREBF1-213ENST00000485080 ELNP15502 786 aa20.77■□□□□ 0.92
SREBF1-213ENST00000485080 CYP2B6P20813 491 aa20.77■□□□□ 0.92
SREBF1-213ENST00000485080 ADORA2AP29274 412 aa20.77■□□□□ 0.92
SREBF1-213ENST00000485080 SLC16A2P36021 539 aa20.77■□□□□ 0.92
SREBF1-213ENST00000485080 UBXN2AP68543 259 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms