RNA–Protein interactions for RNA: ENST00000484968.1

NEB-213, Transcript of nebulin, humanhuman

TSL 4

Gene NEB, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-213ENST00000484968 CTCFLQ8NI51 663 aaPredicted RBP10.9□□□□□ -0.66
NEB-213ENST00000484968 PIBF1Q8WXW3 757 aa10.9□□□□□ -0.66
NEB-213ENST00000484968 PIGSQ96S52 555 aa10.9□□□□□ -0.66
NEB-213ENST00000484968 P2RX7Q99572 595 aaKnown RBP10.9□□□□□ -0.66
NEB-213ENST00000484968 SH2D4AQ9H788 454 aa10.9□□□□□ -0.66
NEB-213ENST00000484968 VAT1LQ9HCJ6 419 aa10.9□□□□□ -0.66
NEB-213ENST00000484968 SH2B1Q9NRF2 756 aaPredicted RBP10.9□□□□□ -0.66
NEB-213ENST00000484968 PRR12Q9ULL5 1215 aa10.9□□□□□ -0.66
NEB-213ENST00000484968 ADAMTS5Q9UNA0 930 aa10.9□□□□□ -0.66
NEB-213ENST00000484968 AGTPBP1Q9UPW5 1226 aa10.9□□□□□ -0.66
NEB-213ENST00000484968 PCNTO95613 3336 aa10.89□□□□□ -0.67
NEB-213ENST00000484968 ZNF536O15090 1300 aa10.89□□□□□ -0.67
NEB-213ENST00000484968 PTPDC1A2A3K4 754 aa10.89□□□□□ -0.67
NEB-213ENST00000484968 PLA2G6O60733 806 aa10.89□□□□□ -0.67
NEB-213ENST00000484968 CNMDO75829 334 aa10.89□□□□□ -0.67
NEB-213ENST00000484968 CYP2C8P10632 490 aa10.89□□□□□ -0.67
NEB-213ENST00000484968 HOXA7P31268 230 aaPredicted RBP10.89□□□□□ -0.67
NEB-213ENST00000484968 VEGFBP49765 207 aa10.89□□□□□ -0.67
NEB-213ENST00000484968 GTF2A2P52657 109 aa10.89□□□□□ -0.67
NEB-213ENST00000484968 GRM1Q13255 1194 aa10.89□□□□□ -0.67
NEB-213ENST00000484968 GPATCH4Q5T3I0 446 aaKnown RBP10.89□□□□□ -0.67
NEB-213ENST00000484968 TYW1BQ6NUM6 668 aa10.89□□□□□ -0.67
NEB-213ENST00000484968 HSCBQ8IWL3 235 aa10.89□□□□□ -0.67
NEB-213ENST00000484968 ATG4CQ96DT6 458 aa10.89□□□□□ -0.67
NEB-213ENST00000484968 DDX11Q96FC9 970 aa10.89□□□□□ -0.67
NEB-213ENST00000484968 CAPNS2Q96L46 248 aa10.89□□□□□ -0.67
NEB-213ENST00000484968 SPZ1Q9BXG8 430 aa10.89□□□□□ -0.67
NEB-213ENST00000484968 ASCC2Q9H1I8 757 aaPredicted RBP10.89□□□□□ -0.67
NEB-213ENST00000484968 RBM28Q9NW13 759 aaKnown RBP10.89□□□□□ -0.67
NEB-213ENST00000484968 V9GY48 417 aaPredicted RBP10.89□□□□□ -0.67
NEB-213ENST00000484968 SPDYE16A6NNV3 312 aaPredicted RBP10.88□□□□□ -0.67
NEB-213ENST00000484968 USP17L15C9J2P7 530 aa10.88□□□□□ -0.67
NEB-213ENST00000484968 USP17L13C9JLJ4 530 aa10.88□□□□□ -0.67
NEB-213ENST00000484968 USP17L11C9JVI0 530 aa10.88□□□□□ -0.67
NEB-213ENST00000484968 USP17L18D6R9N7 530 aa10.88□□□□□ -0.67
NEB-213ENST00000484968 USP17L22D6RA61 530 aa10.88□□□□□ -0.67
NEB-213ENST00000484968 USP17L17D6RBQ6 530 aa10.88□□□□□ -0.67
NEB-213ENST00000484968 USP17L19D6RCP7 530 aa10.88□□□□□ -0.67
NEB-213ENST00000484968 USP17L20D6RJB6 530 aa10.88□□□□□ -0.67
NEB-213ENST00000484968 PDHXO00330 501 aa10.88□□□□□ -0.67
NEB-213ENST00000484968 FMNL1O95466 1100 aaPredicted RBP10.88□□□□□ -0.67
NEB-213ENST00000484968 CETPP11597 493 aa10.88□□□□□ -0.67
NEB-213ENST00000484968 DSG3P32926 999 aa10.88□□□□□ -0.67
NEB-213ENST00000484968 KIF5BP33176 963 aa10.88□□□□□ -0.67
NEB-213ENST00000484968 USP17L24Q0WX57 530 aa10.88□□□□□ -0.67
NEB-213ENST00000484968 SYDE2Q5VT97 1194 aa10.88□□□□□ -0.67
NEB-213ENST00000484968 CCDC102AQ96A19 550 aa10.88□□□□□ -0.67
NEB-213ENST00000484968 KIFC2Q96AC6 838 aa10.88□□□□□ -0.67
NEB-213ENST00000484968 SLC26A6Q9BXS9 759 aa10.88□□□□□ -0.67
NEB-213ENST00000484968 TANGO6Q9C0B7 1094 aa10.88□□□□□ -0.67
NEB-213ENST00000484968 TXNRD2Q9NNW7 524 aa10.88□□□□□ -0.67
NEB-213ENST00000484968 TMOD4Q9NZQ9 345 aa10.88□□□□□ -0.67
NEB-213ENST00000484968 BTBD7Q9P203 1132 aa10.88□□□□□ -0.67
NEB-213ENST00000484968 PPP1R9AQ9ULJ8 1098 aa10.88□□□□□ -0.67
NEB-213ENST00000484968 WDR33Q9C0J8 1336 aaKnown RBP10.87□□□□□ -0.67
NEB-213ENST00000484968 VWA5AO00534 786 aa10.87□□□□□ -0.67
NEB-213ENST00000484968 PRPF3O43395 683 aaKnown RBP10.87□□□□□ -0.67
NEB-213ENST00000484968 FLOT1O75955 427 aa10.87□□□□□ -0.67
NEB-213ENST00000484968 HSPA6P17066 643 aa10.87□□□□□ -0.67
NEB-213ENST00000484968 SMARCA1P28370 1054 aa10.87□□□□□ -0.67
NEB-213ENST00000484968 DDIT3P35638 169 aa10.87□□□□□ -0.67
NEB-213ENST00000484968 TM4SF4P48230 202 aa10.87□□□□□ -0.67
NEB-213ENST00000484968 STAT2P52630 851 aa10.87□□□□□ -0.67
NEB-213ENST00000484968 COG2Q14746 738 aa10.87□□□□□ -0.67
NEB-213ENST00000484968 PPP2R5BQ15173 497 aa10.87□□□□□ -0.67
NEB-213ENST00000484968 QRICH1Q2TAL8 776 aa10.87□□□□□ -0.67
NEB-213ENST00000484968 OTUD7BQ6GQQ9 843 aa10.87□□□□□ -0.67
NEB-213ENST00000484968 SAMD1Q6SPF0 538 aaPredicted RBP10.87□□□□□ -0.67
NEB-213ENST00000484968 PAXIP1Q6ZW49 1069 aaPredicted RBP10.87□□□□□ -0.67
NEB-213ENST00000484968 FASTKD5Q7L8L6 764 aaKnown RBP10.87□□□□□ -0.67
NEB-213ENST00000484968 ANKRD23Q86SG2 305 aa10.87□□□□□ -0.67
NEB-213ENST00000484968 HOMER1Q86YM7 354 aa10.87□□□□□ -0.67
NEB-213ENST00000484968 IFNL1Q8IU54 200 aa10.87□□□□□ -0.67
NEB-213ENST00000484968 PRPF38AQ8NAV1 312 aaKnown RBP10.87□□□□□ -0.67
NEB-213ENST00000484968 SLF1Q9BQI6 1058 aa10.87□□□□□ -0.67
NEB-213ENST00000484968 LLPHQ9BRT6 129 aaKnown RBP10.87□□□□□ -0.67
NEB-213ENST00000484968 RANBP17Q9H2T7 1088 aaKnown RBP10.87□□□□□ -0.67
NEB-213ENST00000484968 SLC38A10Q9HBR0 1119 aa10.87□□□□□ -0.67
NEB-213ENST00000484968 RBPJLQ9UBG7 517 aa10.87□□□□□ -0.67
NEB-213ENST00000484968 FEM1BQ9UK73 627 aa10.87□□□□□ -0.67
NEB-213ENST00000484968 ISY1Q9ULR0 285 aaKnown RBP10.87□□□□□ -0.67
NEB-213ENST00000484968 RIPK3Q9Y572 518 aa10.87□□□□□ -0.67
NEB-213ENST00000484968 ADGRA2Q96PE1 1338 aa10.86□□□□□ -0.67
NEB-213ENST00000484968 PARP14Q460N5 1801 aa10.86□□□□□ -0.67
NEB-213ENST00000484968 MANSC4A6NHS7 340 aaPredicted RBP10.86□□□□□ -0.67
NEB-213ENST00000484968 OPLAHO14841 1288 aa10.86□□□□□ -0.67
NEB-213ENST00000484968 GJB2P29033 226 aa10.86□□□□□ -0.67
NEB-213ENST00000484968 GNAQP50148 359 aa10.86□□□□□ -0.67
NEB-213ENST00000484968 HERVK_113P62684 666 aa10.86□□□□□ -0.67
NEB-213ENST00000484968 TMEM132BQ14DG7 1078 aa10.86□□□□□ -0.67
NEB-213ENST00000484968 NPY5RQ15761 445 aa10.86□□□□□ -0.67
NEB-213ENST00000484968 CDC37Q16543 378 aaPredicted RBP10.86□□□□□ -0.67
NEB-213ENST00000484968 Q3C1V9 767 aa10.86□□□□□ -0.67
NEB-213ENST00000484968 WWC2Q6AWC2 1192 aa10.86□□□□□ -0.67
NEB-213ENST00000484968 DNAJC5GQ8N7S2 189 aa10.86□□□□□ -0.67
NEB-213ENST00000484968 GPKOWQ92917 476 aaPredicted RBP eCLIP10.86□□□□□ -0.67
NEB-213ENST00000484968 COA7Q96BR5 231 aa10.86□□□□□ -0.67
NEB-213ENST00000484968 INTS4Q96HW7 963 aaKnown RBP10.86□□□□□ -0.67
NEB-213ENST00000484968 AGBL1Q96MI9 1066 aa10.86□□□□□ -0.67
NEB-213ENST00000484968 LZTS2Q9BRK4 669 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms