RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 WDR78Q5VTH9 848 aa31.27■■■□□ 2.6
SMDT1-203ENST00000484235 SOCS4Q8WXH5 440 aa31.27■■■□□ 2.6
SMDT1-203ENST00000484235 NUDT12Q9BQG2 462 aa31.27■■■□□ 2.6
SMDT1-203ENST00000484235 MROH8Q9H579 483 aa31.27■■■□□ 2.6
SMDT1-203ENST00000484235 SLC25A27O95847 323 aa31.26■■■□□ 2.59
SMDT1-203ENST00000484235 PDHBP11177 359 aa31.26■■■□□ 2.59
SMDT1-203ENST00000484235 ERCC3P19447 782 aa31.26■■■□□ 2.59
SMDT1-203ENST00000484235 PNMA1Q8ND90 353 aa31.26■■■□□ 2.59
SMDT1-203ENST00000484235 SLC38A10Q9HBR0 1119 aa31.26■■■□□ 2.59
SMDT1-203ENST00000484235 ZNF214Q9UL59 606 aaPredicted RBP31.26■■■□□ 2.59
SMDT1-203ENST00000484235 CTDP1Q9Y5B0 961 aaPredicted RBP31.26■■■□□ 2.59
SMDT1-203ENST00000484235 ATP2A1O14983 1001 aa31.25■■■□□ 2.59
SMDT1-203ENST00000484235 ADCY3O60266 1144 aa31.25■■■□□ 2.59
SMDT1-203ENST00000484235 REC8O95072 547 aa31.25■■■□□ 2.59
SMDT1-203ENST00000484235 SNHG28P0DPA3 235 aa31.25■■■□□ 2.59
SMDT1-203ENST00000484235 GRK4P32298 578 aa31.25■■■□□ 2.59
SMDT1-203ENST00000484235 SEC23AQ15436 765 aa31.25■■■□□ 2.59
SMDT1-203ENST00000484235 MORN1Q5T089 497 aa31.25■■■□□ 2.59
SMDT1-203ENST00000484235 IFIT1BQ5T764 474 aaKnown RBP31.25■■■□□ 2.59
SMDT1-203ENST00000484235 RASGRP2Q7LDG7 609 aa31.25■■■□□ 2.59
SMDT1-203ENST00000484235 RIOX2Q8IUF8 465 aa31.25■■■□□ 2.59
SMDT1-203ENST00000484235 SLAIN1Q8ND83 568 aa31.25■■■□□ 2.59
SMDT1-203ENST00000484235 PXYLP1Q8TE99 480 aa31.25■■■□□ 2.59
SMDT1-203ENST00000484235 IVNS1ABPQ9Y6Y0 642 aa31.25■■■□□ 2.59
SMDT1-203ENST00000484235 SLC15A5A6NIM6 579 aa31.24■■■□□ 2.59
SMDT1-203ENST00000484235 IFIT3O14879 490 aaKnown RBP31.24■■■□□ 2.59
SMDT1-203ENST00000484235 STRNO43815 780 aa31.24■■■□□ 2.59
SMDT1-203ENST00000484235 PTPREP23469 700 aa31.24■■■□□ 2.59
SMDT1-203ENST00000484235 SART3Q15020 963 aaKnown RBP31.24■■■□□ 2.59
SMDT1-203ENST00000484235 BTNL9Q6UXG8 535 aa31.24■■■□□ 2.59
SMDT1-203ENST00000484235 MB21D2Q8IYB1 491 aaPredicted RBP31.24■■■□□ 2.59
SMDT1-203ENST00000484235 USP6NLQ92738 828 aa31.24■■■□□ 2.59
SMDT1-203ENST00000484235 TEX13BQ9BXU2 312 aa31.24■■■□□ 2.59
SMDT1-203ENST00000484235 A0A0G2JMZ2 1700 aa31.24■■■□□ 2.59
SMDT1-203ENST00000484235 ERICH2A1L162 156 aa31.23■■■□□ 2.59
SMDT1-203ENST00000484235 COPB2P35606 906 aa31.23■■■□□ 2.59
SMDT1-203ENST00000484235 OAZ1P54368 228 aa31.23■■■□□ 2.59
SMDT1-203ENST00000484235 NCAPG2Q86XI2 1143 aa31.23■■■□□ 2.59
SMDT1-203ENST00000484235 SH3TC2Q8TF17 1288 aa31.23■■■□□ 2.59
SMDT1-203ENST00000484235 PARP14Q460N5 1801 aa31.22■■■□□ 2.59
SMDT1-203ENST00000484235 XRCC5P13010 732 aaKnown RBP31.22■■■□□ 2.59
SMDT1-203ENST00000484235 ZNF543Q08ER8 600 aa31.22■■■□□ 2.59
SMDT1-203ENST00000484235 TSGA10IPQ3SY00 556 aa31.22■■■□□ 2.59
SMDT1-203ENST00000484235 GPCPD1Q9NPB8 672 aa31.22■■■□□ 2.59
SMDT1-203ENST00000484235 PRR12Q9ULL5 1215 aa31.22■■■□□ 2.59
SMDT1-203ENST00000484235 ZKSCAN1P17029 563 aaPredicted RBP31.21■■■□□ 2.59
SMDT1-203ENST00000484235 RGS2P41220 211 aa31.21■■■□□ 2.59
SMDT1-203ENST00000484235 GPATCH4Q5T3I0 446 aaKnown RBP31.21■■■□□ 2.59
SMDT1-203ENST00000484235 TTBK2Q6IQ55 1244 aa31.21■■■□□ 2.59
SMDT1-203ENST00000484235 CHST3Q7LGC8 479 aa31.21■■■□□ 2.59
SMDT1-203ENST00000484235 CPXCR1Q8N123 301 aa31.21■■■□□ 2.59
SMDT1-203ENST00000484235 MTA3Q9BTC8 594 aa31.21■■■□□ 2.59
SMDT1-203ENST00000484235 FRMPD2Q68DX3 1309 aaPredicted RBP31.21■■■□□ 2.59
SMDT1-203ENST00000484235 CYP2B6P20813 491 aa31.2■■■□□ 2.59
SMDT1-203ENST00000484235 MCM5P33992 734 aa31.2■■■□□ 2.59
SMDT1-203ENST00000484235 ANTXR2P58335 489 aa31.2■■■□□ 2.59
SMDT1-203ENST00000484235 MAP2K5Q13163 448 aa31.2■■■□□ 2.59
SMDT1-203ENST00000484235 GRB14Q14449 540 aa31.2■■■□□ 2.59
SMDT1-203ENST00000484235 SNRNP48Q6IEG0 339 aaKnown RBP31.2■■■□□ 2.59
SMDT1-203ENST00000484235 ABRAQ8N0Z2 381 aa31.2■■■□□ 2.59
SMDT1-203ENST00000484235 IGDCC4Q8TDY8 1250 aa31.2■■■□□ 2.59
SMDT1-203ENST00000484235 BIN2Q9UBW5 565 aaPredicted RBP31.2■■■□□ 2.59
SMDT1-203ENST00000484235 EPB41L2O43491 1005 aaKnown RBP31.19■■■□□ 2.58
SMDT1-203ENST00000484235 ELNP15502 786 aa31.19■■■□□ 2.58
SMDT1-203ENST00000484235 SLC16A2P36021 539 aa31.19■■■□□ 2.58
SMDT1-203ENST00000484235 WTAPQ15007 396 aa31.19■■■□□ 2.58
SMDT1-203ENST00000484235 TMEM67Q5HYA8 995 aa31.19■■■□□ 2.58
SMDT1-203ENST00000484235 TMEM106CQ9BVX2 250 aa31.19■■■□□ 2.58
SMDT1-203ENST00000484235 RAVER2Q9HCJ3 691 aaKnown RBP31.19■■■□□ 2.58
SMDT1-203ENST00000484235 DOCK3Q8IZD9 2030 aa31.19■■■□□ 2.58
SMDT1-203ENST00000484235 FCER1AP12319 257 aa31.18■■■□□ 2.58
SMDT1-203ENST00000484235 KRT32Q14532 448 aa31.18■■■□□ 2.58
SMDT1-203ENST00000484235 SYDE2Q5VT97 1194 aa31.18■■■□□ 2.58
SMDT1-203ENST00000484235 TRMT44Q8IYL2 757 aaKnown RBP31.18■■■□□ 2.58
SMDT1-203ENST00000484235 RASEFQ8IZ41 740 aa31.18■■■□□ 2.58
SMDT1-203ENST00000484235 PRC1O43663 620 aa31.17■■■□□ 2.58
SMDT1-203ENST00000484235 ASPRV1Q53RT3 343 aa31.17■■■□□ 2.58
SMDT1-203ENST00000484235 KCNB2Q92953 911 aa31.17■■■□□ 2.58
SMDT1-203ENST00000484235 RIPK3Q9Y572 518 aa31.17■■■□□ 2.58
SMDT1-203ENST00000484235 HOXC6P09630 235 aa31.16■■■□□ 2.58
SMDT1-203ENST00000484235 ADORA2AP29274 412 aa31.16■■■□□ 2.58
SMDT1-203ENST00000484235 HSPA4P34932 840 aa31.16■■■□□ 2.58
SMDT1-203ENST00000484235 UBXN2AP68543 259 aa31.16■■■□□ 2.58
SMDT1-203ENST00000484235 HABP4Q5JVS0 413 aaKnown RBP31.16■■■□□ 2.58
SMDT1-203ENST00000484235 TMEM87BQ96K49 555 aa31.16■■■□□ 2.58
SMDT1-203ENST00000484235 NEK1Q96PY6 1258 aa31.16■■■□□ 2.58
SMDT1-203ENST00000484235 APBA2Q99767 749 aa31.16■■■□□ 2.58
SMDT1-203ENST00000484235 PARP1P09874 1014 aaKnown RBP31.15■■■□□ 2.58
SMDT1-203ENST00000484235 GOLGA8HP0CJ92 632 aa31.15■■■□□ 2.58
SMDT1-203ENST00000484235 DPP9Q86TI2 863 aa31.15■■■□□ 2.58
SMDT1-203ENST00000484235 TMTC2Q8N394 836 aa31.15■■■□□ 2.58
SMDT1-203ENST00000484235 RANBP17Q9H2T7 1088 aaKnown RBP31.15■■■□□ 2.58
SMDT1-203ENST00000484235 SENP2Q9HC62 589 aa31.15■■■□□ 2.58
SMDT1-203ENST00000484235 SLC4A3P48751 1232 aa31.14■■■□□ 2.58
SMDT1-203ENST00000484235 SNAP25P60880 206 aa31.14■■■□□ 2.58
SMDT1-203ENST00000484235 KCTD2Q14681 263 aa31.14■■■□□ 2.58
SMDT1-203ENST00000484235 MMP19Q99542 508 aa31.14■■■□□ 2.58
SMDT1-203ENST00000484235 SLC5A4Q9NY91 659 aa31.14■■■□□ 2.58
SMDT1-203ENST00000484235 ZNF536O15090 1300 aa31.14■■■□□ 2.58
SMDT1-203ENST00000484235 COL11A1P12107 1806 aaPredicted RBP31.13■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms