RNA–Protein interactions for RNA: ENST00000482687.5

APTX-225, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-225ENST00000482687 TRPM4Q8TD43 1214 aa11.91□□□□□ -0.5
APTX-225ENST00000482687 OXER1Q8TDS5 423 aa11.91□□□□□ -0.5
APTX-225ENST00000482687 LEO1Q8WVC0 666 aaPredicted RBP11.91□□□□□ -0.5
APTX-225ENST00000482687 DPF2Q92785 391 aa11.91□□□□□ -0.5
APTX-225ENST00000482687 GPKOWQ92917 476 aaPredicted RBP eCLIP11.91□□□□□ -0.59e-6■■□□□ 14.5
APTX-225ENST00000482687 ZFP91Q96JP5 570 aaPredicted RBP11.91□□□□□ -0.5
APTX-225ENST00000482687 CCDC17Q96LX7 622 aa11.91□□□□□ -0.5
APTX-225ENST00000482687 HACL1Q9UJ83 578 aa11.91□□□□□ -0.5
APTX-225ENST00000482687 COL2A1P02458 1487 aaPredicted RBP11.9□□□□□ -0.5
APTX-225ENST00000482687 BTBD18B2RXH4 712 aa11.9□□□□□ -0.5
APTX-225ENST00000482687 DDNO94850 711 aaPredicted RBP11.9□□□□□ -0.5
APTX-225ENST00000482687 MMP1P03956 469 aa11.9□□□□□ -0.5
APTX-225ENST00000482687 CYP2C19P33261 490 aa11.9□□□□□ -0.5
APTX-225ENST00000482687 EPS15P42566 896 aa11.9□□□□□ -0.5
APTX-225ENST00000482687 PRAMEF18Q5VWM3 479 aa11.9□□□□□ -0.5
APTX-225ENST00000482687 METTL16Q86W50 562 aaKnown RBP11.9□□□□□ -0.5
APTX-225ENST00000482687 MAP3K14Q99558 947 aa11.9□□□□□ -0.5
APTX-225ENST00000482687 PGAP2Q9UHJ9 254 aa11.9□□□□□ -0.5
APTX-225ENST00000482687 FEZ2Q9UHY8 353 aaPredicted RBP11.9□□□□□ -0.5
APTX-225ENST00000482687 CLIC4Q9Y696 253 aa11.9□□□□□ -0.5
APTX-225ENST00000482687 H7C1D1 291 aa11.89□□□□□ -0.51
APTX-225ENST00000482687 ADAMTS3O15072 1205 aa11.89□□□□□ -0.51
APTX-225ENST00000482687 PDHBP11177 359 aa11.89□□□□□ -0.51
APTX-225ENST00000482687 NR5A1Q13285 461 aa11.89□□□□□ -0.51
APTX-225ENST00000482687 CCDC96Q2M329 555 aa11.89□□□□□ -0.51
APTX-225ENST00000482687 C9orf131Q5VYM1 1079 aa11.89□□□□□ -0.51
APTX-225ENST00000482687 TTBK2Q6IQ55 1244 aa11.89□□□□□ -0.51
APTX-225ENST00000482687 FAM83AQ86UY5 434 aa11.89□□□□□ -0.51
APTX-225ENST00000482687 HOMER1Q86YM7 354 aa11.89□□□□□ -0.51
APTX-225ENST00000482687 SIAH1Q8IUQ4 282 aa11.89□□□□□ -0.51
APTX-225ENST00000482687 DIS3L2Q8IYB7 885 aaKnown RBP11.89□□□□□ -0.51
APTX-225ENST00000482687 CCDC112Q8NEF3 446 aa11.89□□□□□ -0.51
APTX-225ENST00000482687 ZNF396Q96N95 335 aaPredicted RBP11.89□□□□□ -0.51
APTX-225ENST00000482687 FUCA2Q9BTY2 467 aa11.89□□□□□ -0.51
APTX-225ENST00000482687 GEMIN8Q9NWZ8 242 aaKnown RBP11.89□□□□□ -0.51
APTX-225ENST00000482687 ATAD5Q96QE3 1844 aa11.89□□□□□ -0.51
APTX-225ENST00000482687 POLR2AP24928 1970 aaKnown RBP11.89□□□□□ -0.51
APTX-225ENST00000482687 SCG2P13521 617 aa11.89□□□□□ -0.51
APTX-225ENST00000482687 TNNI2P48788 182 aa11.89□□□□□ -0.51
APTX-225ENST00000482687 GNAQP50148 359 aa11.89□□□□□ -0.51
APTX-225ENST00000482687 MMP14P50281 582 aa11.89□□□□□ -0.51
APTX-225ENST00000482687 ICA1Q05084 483 aa11.89□□□□□ -0.51
APTX-225ENST00000482687 ANGEL2Q5VTE6 544 aaKnown RBP11.89□□□□□ -0.51
APTX-225ENST00000482687 FKBP1CQ5VVH2 108 aa11.89□□□□□ -0.51
APTX-225ENST00000482687 MYSM1Q5VVJ2 828 aa11.89□□□□□ -0.51
APTX-225ENST00000482687 TMEM179Q6ZVK1 233 aa11.89□□□□□ -0.51
APTX-225ENST00000482687 KCTD1Q719H9 257 aa11.89□□□□□ -0.51
APTX-225ENST00000482687 CCDC84Q86UT8 332 aaPredicted RBP11.89□□□□□ -0.51
APTX-225ENST00000482687 CABP5Q9NP86 173 aa11.89□□□□□ -0.51
APTX-225ENST00000482687 GPRC5DQ9NZD1 345 aa11.89□□□□□ -0.51
APTX-225ENST00000482687 HERC5Q9UII4 1024 aaKnown RBP11.89□□□□□ -0.51
APTX-225ENST00000482687 FAM205CA6NFA0 338 aa11.88□□□□□ -0.51
APTX-225ENST00000482687 SLC16A2P36021 539 aa11.88□□□□□ -0.51
APTX-225ENST00000482687 SAFBQ15424 915 aaKnown RBP eCLIP11.88□□□□□ -0.51
APTX-225ENST00000482687 PFKFB3Q16875 520 aaPredicted RBP11.88□□□□□ -0.51
APTX-225ENST00000482687 NOM1Q5C9Z4 860 aaKnown RBP11.88□□□□□ -0.51
APTX-225ENST00000482687 GPC2Q8N158 579 aa11.88□□□□□ -0.51
APTX-225ENST00000482687 NUP88Q99567 741 aaPredicted RBP11.88□□□□□ -0.51
APTX-225ENST00000482687 SCAND2PQ9GZW5 306 aaPredicted RBP11.88□□□□□ -0.51
APTX-225ENST00000482687 KANSL2Q9H9L4 492 aa11.88□□□□□ -0.51
APTX-225ENST00000482687 CFAP45Q9UL16 551 aa11.88□□□□□ -0.51
APTX-225ENST00000482687 ATP2B1P20020 1258 aa11.87□□□□□ -0.51
APTX-225ENST00000482687 HIRAP54198 1017 aaPredicted RBP11.87□□□□□ -0.51
APTX-225ENST00000482687 UBE2HP62256 183 aa11.87□□□□□ -0.51
APTX-225ENST00000482687 GPR162Q16538 588 aa11.87□□□□□ -0.51
APTX-225ENST00000482687 MUM1L1Q5H9M0 696 aa11.87□□□□□ -0.51
APTX-225ENST00000482687 SLFN13Q68D06 897 aa11.87□□□□□ -0.51
APTX-225ENST00000482687 HEATR3Q7Z4Q2 680 aa11.87□□□□□ -0.51
APTX-225ENST00000482687 BRAPQ7Z569 592 aa11.87□□□□□ -0.51
APTX-225ENST00000482687 PGBD1Q96JS3 809 aa11.87□□□□□ -0.51
APTX-225ENST00000482687 TEPSINQ96N21 525 aa11.87□□□□□ -0.51
APTX-225ENST00000482687 PIGSQ96S52 555 aa11.87□□□□□ -0.51
APTX-225ENST00000482687 PHF20Q9BVI0 1012 aa11.87□□□□□ -0.51
APTX-225ENST00000482687 FZD1Q9UP38 647 aa11.87□□□□□ -0.51
APTX-225ENST00000482687 A0A1W2PRG0 241 aa11.87□□□□□ -0.51
APTX-225ENST00000482687 XBP1P17861 261 aa11.87□□□□□ -0.51
APTX-225ENST00000482687 ECE1P42892 770 aa11.87□□□□□ -0.51
APTX-225ENST00000482687 NLRP5P59047 1200 aa11.87□□□□□ -0.51
APTX-225ENST00000482687 ZNF543Q08ER8 600 aa11.87□□□□□ -0.51
APTX-225ENST00000482687 EARS2Q5JPH6 523 aaKnown RBP11.87□□□□□ -0.51
APTX-225ENST00000482687 NBPF12Q5TAG4 269 aaPredicted RBP11.87□□□□□ -0.51
APTX-225ENST00000482687 WWC2Q6AWC2 1192 aa11.87□□□□□ -0.51
APTX-225ENST00000482687 TYW1BQ6NUM6 668 aa11.87□□□□□ -0.51
APTX-225ENST00000482687 DLK2Q6UY11 383 aa11.87□□□□□ -0.51
APTX-225ENST00000482687 ACER1Q8TDN7 264 aa11.87□□□□□ -0.51
APTX-225ENST00000482687 LZTS2Q9BRK4 669 aa11.87□□□□□ -0.51
APTX-225ENST00000482687 DEFB129Q9H1M3 183 aa11.87□□□□□ -0.51
APTX-225ENST00000482687 NYAP2Q9P242 653 aa11.87□□□□□ -0.51
APTX-225ENST00000482687 SNHG28P0DPA3 235 aa11.86□□□□□ -0.51
APTX-225ENST00000482687 KRT2P35908 639 aa11.86□□□□□ -0.51
APTX-225ENST00000482687 STK38Q15208 465 aa11.86□□□□□ -0.51
APTX-225ENST00000482687 ZYXQ15942 572 aaKnown RBP11.86□□□□□ -0.51
APTX-225ENST00000482687 NOSTRINQ8IVI9 506 aa11.86□□□□□ -0.51
APTX-225ENST00000482687 RCOR1Q9UKL0 485 aa11.86□□□□□ -0.51
APTX-225ENST00000482687 ZBTB21Q9ULJ3 1066 aa11.86□□□□□ -0.51
APTX-225ENST00000482687 SRCAPQ6ZRS2 3230 aa11.85□□□□□ -0.51
APTX-225ENST00000482687 GOLGA6L4A6NEF3 574 aa11.85□□□□□ -0.51
APTX-225ENST00000482687 F5H6K3 240 aa11.85□□□□□ -0.51
APTX-225ENST00000482687 TNNT1P13805 278 aa11.85□□□□□ -0.51
APTX-225ENST00000482687 LIG1P18858 919 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms