RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 CTNND2Q9UQB3 1225 aa16.86■□□□□ 0.29
ATG4B-220ENST00000482507 DLEC1Q9Y238 1755 aa16.86■□□□□ 0.29
ATG4B-220ENST00000482507 SASH3O75995 380 aa16.85■□□□□ 0.29
ATG4B-220ENST00000482507 FXR1P51114 621 aaKnown RBP eCLIP16.85■□□□□ 0.29
ATG4B-220ENST00000482507 TMCO3Q6UWJ1 677 aa16.85■□□□□ 0.29
ATG4B-220ENST00000482507 PIK3AP1Q6ZUJ8 805 aa16.85■□□□□ 0.29
ATG4B-220ENST00000482507 NSUN4Q96CB9 384 aaKnown RBP16.85■□□□□ 0.29
ATG4B-220ENST00000482507 CASZ1Q86V15 1759 aa16.85■□□□□ 0.29
ATG4B-220ENST00000482507 RNF225M0QZC1 329 aaPredicted RBP16.85■□□□□ 0.29
ATG4B-220ENST00000482507 DDAH1O94760 285 aa16.85■□□□□ 0.29
ATG4B-220ENST00000482507 GYPCP04921 128 aa16.85■□□□□ 0.29
ATG4B-220ENST00000482507 ALDH1B1P30837 517 aa16.85■□□□□ 0.29
ATG4B-220ENST00000482507 CASP14P31944 242 aa16.85■□□□□ 0.29
ATG4B-220ENST00000482507 CT47A1Q5JQC4 288 aaPredicted RBP16.85■□□□□ 0.29
ATG4B-220ENST00000482507 PDXDC2PQ6P474 469 aa16.85■□□□□ 0.29
ATG4B-220ENST00000482507 POLLQ9UGP5 575 aa16.85■□□□□ 0.29
ATG4B-220ENST00000482507 ANKRD31Q8N7Z5 1873 aa16.84■□□□□ 0.29
ATG4B-220ENST00000482507 MFAP3LO75121 409 aa16.84■□□□□ 0.29
ATG4B-220ENST00000482507 MECOMQ03112 1051 aa16.84■□□□□ 0.29
ATG4B-220ENST00000482507 TEX35Q5T0J7 233 aa16.84■□□□□ 0.29
ATG4B-220ENST00000482507 UFL1O94874 794 aa16.84■□□□□ 0.29
ATG4B-220ENST00000482507 ABL1P00519 1130 aa16.84■□□□□ 0.29
ATG4B-220ENST00000482507 CCDC175P0C221 793 aa16.84■□□□□ 0.29
ATG4B-220ENST00000482507 CALM1P0DP23 149 aa16.84■□□□□ 0.29
ATG4B-220ENST00000482507 CALM2P0DP24 149 aa16.84■□□□□ 0.29
ATG4B-220ENST00000482507 CALM3P0DP25 149 aa16.84■□□□□ 0.29
ATG4B-220ENST00000482507 DPEP1P16444 411 aa16.84■□□□□ 0.29
ATG4B-220ENST00000482507 CCT6AP40227 531 aaKnown RBP16.84■□□□□ 0.29
ATG4B-220ENST00000482507 CAVIN4Q5BKX8 364 aa16.84■□□□□ 0.29
ATG4B-220ENST00000482507 CCDC12Q8WUD4 166 aaPredicted RBP16.84■□□□□ 0.29
ATG4B-220ENST00000482507 DCP1AQ9NPI6 582 aaPredicted RBP16.84■□□□□ 0.29
ATG4B-220ENST00000482507 C6orf229H3BNL8 230 aa16.83■□□□□ 0.28
ATG4B-220ENST00000482507 TBC1D8O95759 1140 aa16.83■□□□□ 0.28
ATG4B-220ENST00000482507 BMP15O95972 392 aa16.83■□□□□ 0.28
ATG4B-220ENST00000482507 POLD1P28340 1107 aa16.83■□□□□ 0.28
ATG4B-220ENST00000482507 CDC25AP30304 524 aa16.83■□□□□ 0.28
ATG4B-220ENST00000482507 MCM7P33993 719 aa16.83■□□□□ 0.28
ATG4B-220ENST00000482507 FBXO33Q7Z6M2 555 aa16.83■□□□□ 0.28
ATG4B-220ENST00000482507 PPFIBP1Q86W92 1011 aa16.83■□□□□ 0.28
ATG4B-220ENST00000482507 ARGLU1Q9NWB6 273 aaPredicted RBP16.83■□□□□ 0.28
ATG4B-220ENST00000482507 ATP6V0A2Q9Y487 856 aa16.83■□□□□ 0.28
ATG4B-220ENST00000482507 NRXN2Q9P2S2 1712 aa16.83■□□□□ 0.28
ATG4B-220ENST00000482507 MYH13Q9UKX3 1938 aa16.83■□□□□ 0.28
ATG4B-220ENST00000482507 SCG2P13521 617 aa16.82■□□□□ 0.28
ATG4B-220ENST00000482507 KRT31Q15323 416 aa16.82■□□□□ 0.28
ATG4B-220ENST00000482507 SLC4A8Q2Y0W8 1093 aa16.82■□□□□ 0.28
ATG4B-220ENST00000482507 RCSD1Q6JBY9 416 aa16.82■□□□□ 0.28
ATG4B-220ENST00000482507 CC2D1AQ6P1N0 951 aaPredicted RBP16.82■□□□□ 0.28
ATG4B-220ENST00000482507 SP8Q8IXZ3 490 aa16.82■□□□□ 0.28
ATG4B-220ENST00000482507 BRMS1Q9HCU9 246 aa16.82■□□□□ 0.28
ATG4B-220ENST00000482507 RIMBP2O15034 1052 aa16.82■□□□□ 0.28
ATG4B-220ENST00000482507 ORC4O43929 436 aa16.82■□□□□ 0.28
ATG4B-220ENST00000482507 PARD6BQ9BYG5 372 aa16.82■□□□□ 0.28
ATG4B-220ENST00000482507 FAM205AQ6ZU69 1335 aa16.82■□□□□ 0.28
ATG4B-220ENST00000482507 SEMA3EO15041 775 aa16.81■□□□□ 0.28
ATG4B-220ENST00000482507 TFRCP02786 760 aaKnown RBP16.81■□□□□ 0.28
ATG4B-220ENST00000482507 KCNA3P22001 575 aa16.81■□□□□ 0.28
ATG4B-220ENST00000482507 PRDX5P30044 214 aa16.81■□□□□ 0.28
ATG4B-220ENST00000482507 NLRP5P59047 1200 aa16.81■□□□□ 0.28
ATG4B-220ENST00000482507 RRAGBQ5VZM2 374 aa16.81■□□□□ 0.28
ATG4B-220ENST00000482507 GPR161Q8N6U8 529 aaKnown RBP16.81■□□□□ 0.28
ATG4B-220ENST00000482507 C4orf32Q8N8J7 132 aa16.81■□□□□ 0.28
ATG4B-220ENST00000482507 TBC1D16Q8TBP0 767 aa16.81■□□□□ 0.28
ATG4B-220ENST00000482507 CCDC34Q96HJ3 373 aa16.81■□□□□ 0.28
ATG4B-220ENST00000482507 ZSWIM4Q9H7M6 989 aa16.81■□□□□ 0.28
ATG4B-220ENST00000482507 HIBADHP31937 336 aaKnown RBP16.81■□□□□ 0.28
ATG4B-220ENST00000482507 ERVK-24P63145 666 aa16.81■□□□□ 0.28
ATG4B-220ENST00000482507 PFKFB3Q16875 520 aaPredicted RBP16.81■□□□□ 0.28
ATG4B-220ENST00000482507 RASGRP2Q7LDG7 609 aa16.81■□□□□ 0.28
ATG4B-220ENST00000482507 IQUBQ8NA54 791 aa16.81■□□□□ 0.28
ATG4B-220ENST00000482507 ACRBPQ8NEB7 543 aa16.81■□□□□ 0.28
ATG4B-220ENST00000482507 CTCFLQ8NI51 663 aaPredicted RBP16.81■□□□□ 0.28
ATG4B-220ENST00000482507 UBXN6Q9BZV1 441 aa16.81■□□□□ 0.28
ATG4B-220ENST00000482507 GGA1Q9UJY5 639 aa16.81■□□□□ 0.28
ATG4B-220ENST00000482507 C21orf2O43822 256 aa16.8■□□□□ 0.28
ATG4B-220ENST00000482507 TPM1P09493 284 aa16.8■□□□□ 0.28
ATG4B-220ENST00000482507 PCP11498 1178 aaKnown RBP16.8■□□□□ 0.28
ATG4B-220ENST00000482507 FECHP22830 423 aa16.8■□□□□ 0.28
ATG4B-220ENST00000482507 PTGER2P43116 358 aa16.8■□□□□ 0.28
ATG4B-220ENST00000482507 CTAGE1Q96RT6 745 aa16.8■□□□□ 0.28
ATG4B-220ENST00000482507 NAA15Q9BXJ9 866 aaKnown RBP16.8■□□□□ 0.28
ATG4B-220ENST00000482507 VPS16Q9H269 839 aa16.8■□□□□ 0.28
ATG4B-220ENST00000482507 LIMA1Q9UHB6 759 aaKnown RBP16.8■□□□□ 0.28
ATG4B-220ENST00000482507 LEMD3Q9Y2U8 911 aa16.8■□□□□ 0.28
ATG4B-220ENST00000482507 STYK1Q6J9G0 422 aa16.8■□□□□ 0.28
ATG4B-220ENST00000482507 SGIP1Q9BQI5 828 aa16.8■□□□□ 0.28
ATG4B-220ENST00000482507 TAB2Q9NYJ8 693 aa16.8■□□□□ 0.28
ATG4B-220ENST00000482507 MAPK8IP1Q9UQF2 711 aa16.8■□□□□ 0.28
ATG4B-220ENST00000482507 GDAQ9Y2T3 454 aa16.8■□□□□ 0.28
ATG4B-220ENST00000482507 LRRC10BA6NIK2 292 aa16.79■□□□□ 0.28
ATG4B-220ENST00000482507 TYW1BQ6NUM6 668 aa16.79■□□□□ 0.28
ATG4B-220ENST00000482507 RASGRP4Q8TDF6 673 aa16.79■□□□□ 0.28
ATG4B-220ENST00000482507 RABGGTAQ92696 567 aa16.79■□□□□ 0.28
ATG4B-220ENST00000482507 GPKOWQ92917 476 aaPredicted RBP eCLIP16.79■□□□□ 0.283e-7■□□□□ 9.2
ATG4B-220ENST00000482507 QSER1Q2KHR3 1735 aa16.79■□□□□ 0.28
ATG4B-220ENST00000482507 ITIH6Q6UXX5 1313 aa16.79■□□□□ 0.28
ATG4B-220ENST00000482507 GTPBP6O43824 516 aaPredicted RBP16.79■□□□□ 0.28
ATG4B-220ENST00000482507 FILIP1LQ4L180 1135 aa16.79■□□□□ 0.28
ATG4B-220ENST00000482507 DPP8Q6V1X1 898 aaPredicted RBP16.79■□□□□ 0.28
ATG4B-220ENST00000482507 RWDD2AQ9UIY3 292 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms