RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 ANKRD18AQ8IVF6 992 aa14.22□□□□□ -0.13
VPS52-218ENST00000482399 PIGBQ92521 554 aa14.22□□□□□ -0.13
VPS52-218ENST00000482399 HAUS4Q9H6D7 363 aa14.22□□□□□ -0.13
VPS52-218ENST00000482399 TCP11L1Q9NUJ3 509 aa14.22□□□□□ -0.13
VPS52-218ENST00000482399 MAP3K15Q6ZN16 1313 aa14.22□□□□□ -0.13
VPS52-218ENST00000482399 NDUFAB1O14561 156 aa14.22□□□□□ -0.13
VPS52-218ENST00000482399 TACC1O75410 805 aa14.22□□□□□ -0.13
VPS52-218ENST00000482399 BMP15O95972 392 aa14.22□□□□□ -0.13
VPS52-218ENST00000482399 GNAT2P19087 354 aa14.22□□□□□ -0.13
VPS52-218ENST00000482399 MCM3P25205 808 aa14.22□□□□□ -0.13
VPS52-218ENST00000482399 SARSP49591 514 aaKnown RBP14.22□□□□□ -0.13
VPS52-218ENST00000482399 MUM1L1Q5H9M0 696 aa14.22□□□□□ -0.13
VPS52-218ENST00000482399 CCDC51Q96ER9 411 aa14.22□□□□□ -0.13
VPS52-218ENST00000482399 TUBGCP2Q9BSJ2 902 aa14.22□□□□□ -0.13
VPS52-218ENST00000482399 RNF26Q9BY78 433 aaPredicted RBP14.22□□□□□ -0.13
VPS52-218ENST00000482399 TACC3Q9Y6A5 838 aa14.22□□□□□ -0.13
VPS52-218ENST00000482399 RTL9Q8NET4 1388 aa14.22□□□□□ -0.13
VPS52-218ENST00000482399 ESYT3A0FGR9 886 aa14.21□□□□□ -0.13
VPS52-218ENST00000482399 EPS15P42566 896 aa14.21□□□□□ -0.13
VPS52-218ENST00000482399 SELENOOQ9BVL4 669 aa14.21□□□□□ -0.13
VPS52-218ENST00000482399 LACRTQ9GZZ8 138 aa14.21□□□□□ -0.13
VPS52-218ENST00000482399 SLC39A2Q9NP94 309 aa14.21□□□□□ -0.13
VPS52-218ENST00000482399 ERVV-2B6SEH9 535 aa14.21□□□□□ -0.13
VPS52-218ENST00000482399 GTPBP6O43824 516 aaPredicted RBP14.21□□□□□ -0.13
VPS52-218ENST00000482399 SETQ01105 290 aaPredicted RBP14.21□□□□□ -0.13
VPS52-218ENST00000482399 EVX2Q03828 476 aa14.21□□□□□ -0.13
VPS52-218ENST00000482399 EZH2Q15910 746 aaKnown RBP14.21□□□□□ -0.13
VPS52-218ENST00000482399 IFIH1Q9BYX4 1025 aaKnown RBP14.21□□□□□ -0.13
VPS52-218ENST00000482399 MLXIPQ9HAP2 919 aa14.21□□□□□ -0.13
VPS52-218ENST00000482399 MED4Q9NPJ6 270 aa14.21□□□□□ -0.13
VPS52-218ENST00000482399 JRKLQ9Y4A0 524 aa14.21□□□□□ -0.13
VPS52-218ENST00000482399 XDHP47989 1333 aa14.21□□□□□ -0.13
VPS52-218ENST00000482399 TULP2O00295 520 aa14.21□□□□□ -0.14
VPS52-218ENST00000482399 MAP2K7O14733 419 aa14.21□□□□□ -0.14
VPS52-218ENST00000482399 HSF2BPO75031 334 aa14.21□□□□□ -0.14
VPS52-218ENST00000482399 MOCS3O95396 460 aa14.21□□□□□ -0.14
VPS52-218ENST00000482399 CYP2D6P10635 497 aa14.21□□□□□ -0.14
VPS52-218ENST00000482399 LRRC31Q6UY01 552 aa14.21□□□□□ -0.14
VPS52-218ENST00000482399 RRAGAQ7L523 313 aa14.21□□□□□ -0.14
VPS52-218ENST00000482399 NCK2O43639 380 aa14.2□□□□□ -0.14
VPS52-218ENST00000482399 ZNF579Q8NAF0 562 aaKnown RBP14.2□□□□□ -0.14
VPS52-218ENST00000482399 EHBP1Q8NDI1 1231 aa14.2□□□□□ -0.14
VPS52-218ENST00000482399 PPM1EQ8WY54 764 aa14.2□□□□□ -0.14
VPS52-218ENST00000482399 FBXL16Q8N461 479 aa14.2□□□□□ -0.14
VPS52-218ENST00000482399 MB21D1Q8N884 522 aa14.2□□□□□ -0.14
VPS52-218ENST00000482399 NHEJ1Q9H9Q4 299 aaPredicted RBP14.2□□□□□ -0.14
VPS52-218ENST00000482399 TBC1D7Q9P0N9 293 aa14.2□□□□□ -0.14
VPS52-218ENST00000482399 MKRN1Q9UHC7 482 aaKnown RBP14.2□□□□□ -0.14
VPS52-218ENST00000482399 TUBGCP6Q96RT7 1819 aa14.2□□□□□ -0.14
VPS52-218ENST00000482399 PLEKP08567 350 aaPredicted RBP14.2□□□□□ -0.14
VPS52-218ENST00000482399 SCG2P13521 617 aa14.2□□□□□ -0.14
VPS52-218ENST00000482399 PMS1P54277 932 aaKnown RBP14.2□□□□□ -0.14
VPS52-218ENST00000482399 CCDC152Q4G0S7 254 aa14.2□□□□□ -0.14
VPS52-218ENST00000482399 RWDD2AQ9UIY3 292 aa14.2□□□□□ -0.14
VPS52-218ENST00000482399 WDR19Q8NEZ3 1342 aa14.2□□□□□ -0.14
VPS52-218ENST00000482399 ERLIN2O94905 339 aa14.19□□□□□ -0.14
VPS52-218ENST00000482399 TXKP42681 527 aa14.19□□□□□ -0.14
VPS52-218ENST00000482399 USP14P54578 494 aa14.19□□□□□ -0.14
VPS52-218ENST00000482399 PDCLQ13371 301 aa14.19□□□□□ -0.14
VPS52-218ENST00000482399 ZNF658Q5TYW1 1059 aaPredicted RBP14.19□□□□□ -0.14
VPS52-218ENST00000482399 SH2D3CQ8N5H7 860 aa14.19□□□□□ -0.14
VPS52-218ENST00000482399 ALS2CR12Q96Q35 445 aa14.19□□□□□ -0.14
VPS52-218ENST00000482399 KANSL2Q9H9L4 492 aa14.19□□□□□ -0.14
VPS52-218ENST00000482399 STK36Q9NRP7 1315 aa14.19□□□□□ -0.14
VPS52-218ENST00000482399 KCNQ4P56696 695 aa14.19□□□□□ -0.14
VPS52-218ENST00000482399 CHRNDQ07001 517 aa14.19□□□□□ -0.14
VPS52-218ENST00000482399 TUBB2AQ13885 445 aa14.19□□□□□ -0.14
VPS52-218ENST00000482399 TRIM14Q14142 442 aa14.19□□□□□ -0.14
VPS52-218ENST00000482399 C8orf74Q6P047 294 aa14.19□□□□□ -0.14
VPS52-218ENST00000482399 DZIP1Q86YF9 867 aaKnown RBP14.19□□□□□ -0.14
VPS52-218ENST00000482399 KLHL7Q8IXQ5 586 aa14.19□□□□□ -0.14
VPS52-218ENST00000482399 STAG1Q8WVM7 1258 aa14.19□□□□□ -0.14
VPS52-218ENST00000482399 TUBB2BQ9BVA1 445 aa14.19□□□□□ -0.14
VPS52-218ENST00000482399 CAPS2Q9BXY5 557 aa14.19□□□□□ -0.14
VPS52-218ENST00000482399 H7C1D1 291 aa14.18□□□□□ -0.14
VPS52-218ENST00000482399 CCNT1O60563 726 aaKnown RBP14.18□□□□□ -0.14
VPS52-218ENST00000482399 TECP42680 631 aa14.18□□□□□ -0.14
VPS52-218ENST00000482399 MAGEA1P43355 309 aa14.18□□□□□ -0.14
VPS52-218ENST00000482399 NOP2P46087 812 aaKnown RBP14.18□□□□□ -0.14
VPS52-218ENST00000482399 SOGA3Q5TF21 947 aa14.18□□□□□ -0.14
VPS52-218ENST00000482399 NFRKBQ6P4R8 1299 aa14.18□□□□□ -0.14
VPS52-218ENST00000482399 CNOT6LQ96LI5 555 aaKnown RBP14.18□□□□□ -0.14
VPS52-218ENST00000482399 FBXO3Q9UK99 471 aa14.18□□□□□ -0.14
VPS52-218ENST00000482399 NUTM2BA6NNL0 878 aaPredicted RBP14.18□□□□□ -0.14
VPS52-218ENST00000482399 NUTM2EB1AL46 878 aaPredicted RBP14.18□□□□□ -0.14
VPS52-218ENST00000482399 CSF1RP07333 972 aa14.18□□□□□ -0.14
VPS52-218ENST00000482399 MYBL2P10244 700 aa14.18□□□□□ -0.14
VPS52-218ENST00000482399 ARHGAP25P42331 645 aa14.18□□□□□ -0.14
VPS52-218ENST00000482399 TMC4Q7Z404 712 aa14.18□□□□□ -0.14
VPS52-218ENST00000482399 ADGRA1Q86SQ6 560 aa14.18□□□□□ -0.14
VPS52-218ENST00000482399 SRBD1Q8N5C6 995 aaKnown RBP14.18□□□□□ -0.14
VPS52-218ENST00000482399 HDAC7Q8WUI4 952 aa14.18□□□□□ -0.14
VPS52-218ENST00000482399 RRP36Q96EU6 259 aaKnown RBP14.18□□□□□ -0.14
VPS52-218ENST00000482399 SAP30BPQ9UHR5 308 aaKnown RBP14.18□□□□□ -0.14
VPS52-218ENST00000482399 KIF5BP33176 963 aa14.18□□□□□ -0.14
VPS52-218ENST00000482399 NAPAP54920 295 aa14.18□□□□□ -0.14
VPS52-218ENST00000482399 TFAP4Q01664 338 aa14.18□□□□□ -0.14
VPS52-218ENST00000482399 RASSF7Q02833 373 aa14.18□□□□□ -0.14
VPS52-218ENST00000482399 LRRC41Q15345 812 aa14.18□□□□□ -0.14
VPS52-218ENST00000482399 CCDC40Q4G0X9 1142 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms