RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 MYSM1Q5VVJ2 828 aa17.03■□□□□ 0.32
SNRNP200-205ENST00000480835 PPP1R18Q6NYC8 613 aa17.03■□□□□ 0.32
SNRNP200-205ENST00000480835 HEATR3Q7Z4Q2 680 aa17.03■□□□□ 0.32
SNRNP200-205ENST00000480835 FAM160B2Q86V87 743 aa17.03■□□□□ 0.32
SNRNP200-205ENST00000480835 HOMER1Q86YM7 354 aa17.03■□□□□ 0.32
SNRNP200-205ENST00000480835 NOSTRINQ8IVI9 506 aa17.03■□□□□ 0.32
SNRNP200-205ENST00000480835 DAGLBQ8NCG7 672 aa17.03■□□□□ 0.32
SNRNP200-205ENST00000480835 CDCA5Q96FF9 252 aa17.03■□□□□ 0.32
SNRNP200-205ENST00000480835 CPVLQ9H3G5 476 aa17.03■□□□□ 0.32
SNRNP200-205ENST00000480835 GOLGB1Q14789 3259 aaKnown RBP17.02■□□□□ 0.32
SNRNP200-205ENST00000480835 ESYT2A0FGR8 921 aa17.02■□□□□ 0.32
SNRNP200-205ENST00000480835 BTBD18B2RXH4 712 aa17.02■□□□□ 0.32
SNRNP200-205ENST00000480835 USP17L10C9JJH3 530 aa17.02■□□□□ 0.32
SNRNP200-205ENST00000480835 TMEM232C9JQI7 657 aa17.02■□□□□ 0.32
SNRNP200-205ENST00000480835 ZBTB5O15062 677 aa17.02■□□□□ 0.32
SNRNP200-205ENST00000480835 WDR46O15213 610 aaKnown RBP17.02■□□□□ 0.32
SNRNP200-205ENST00000480835 SLC16A2P36021 539 aa17.02■□□□□ 0.32
SNRNP200-205ENST00000480835 STAT2P52630 851 aa17.02■□□□□ 0.32
SNRNP200-205ENST00000480835 TRAF1Q13077 416 aa17.02■□□□□ 0.32
SNRNP200-205ENST00000480835 FAM173BQ6P4H8 233 aa17.02■□□□□ 0.32
SNRNP200-205ENST00000480835 ZKSCAN4Q969J2 545 aaPredicted RBP17.02■□□□□ 0.32
SNRNP200-205ENST00000480835 SHISA4Q96DD7 197 aa17.02■□□□□ 0.32
SNRNP200-205ENST00000480835 CHAMP1Q96JM3 812 aa17.02■□□□□ 0.32
SNRNP200-205ENST00000480835 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.02■□□□□ 0.32
SNRNP200-205ENST00000480835 FEM1BQ9UK73 627 aa17.02■□□□□ 0.32
SNRNP200-205ENST00000480835 C19orf81C9J6K1 198 aa17.01■□□□□ 0.31
SNRNP200-205ENST00000480835 FIBPO43427 364 aa17.01■□□□□ 0.31
SNRNP200-205ENST00000480835 PRPF40AO75400 957 aaKnown RBP17.01■□□□□ 0.31
SNRNP200-205ENST00000480835 GNA11P29992 359 aa17.01■□□□□ 0.31
SNRNP200-205ENST00000480835 NAPAP54920 295 aa17.01■□□□□ 0.31
SNRNP200-205ENST00000480835 IKQ13123 557 aaPredicted RBP17.01■□□□□ 0.31
SNRNP200-205ENST00000480835 NPY5RQ15761 445 aa17.01■□□□□ 0.31
SNRNP200-205ENST00000480835 ZNF280CQ8ND82 737 aa17.01■□□□□ 0.31
SNRNP200-205ENST00000480835 GPKOWQ92917 476 aaPredicted RBP eCLIP17.01■□□□□ 0.31
SNRNP200-205ENST00000480835 NUP88Q99567 741 aaPredicted RBP17.01■□□□□ 0.31
SNRNP200-205ENST00000480835 GLIS2Q9BZE0 524 aaPredicted RBP17.01■□□□□ 0.31
SNRNP200-205ENST00000480835 C6orf50Q9HD87 102 aa17.01■□□□□ 0.31
SNRNP200-205ENST00000480835 RTEL1Q9NZ71 1219 aa17.01■□□□□ 0.31
SNRNP200-205ENST00000480835 PCDHA4Q9UN74 947 aa17.01■□□□□ 0.31
SNRNP200-205ENST00000480835 CLEC11AQ9Y240 323 aa17.01■□□□□ 0.31
SNRNP200-205ENST00000480835 CSADQ9Y600 493 aa17.01■□□□□ 0.31
SNRNP200-205ENST00000480835 YEATS4O95619 227 aa17■□□□□ 0.31
SNRNP200-205ENST00000480835 MAP3K11Q16584 847 aa17■□□□□ 0.31
SNRNP200-205ENST00000480835 RILPL1Q5EBL4 403 aa17■□□□□ 0.31
SNRNP200-205ENST00000480835 KIAA1755Q5JYT7 1200 aa17■□□□□ 0.31
SNRNP200-205ENST00000480835 FAM83BQ5T0W9 1011 aa17■□□□□ 0.31
SNRNP200-205ENST00000480835 CCDC84Q86UT8 332 aaPredicted RBP17■□□□□ 0.31
SNRNP200-205ENST00000480835 BLIDQ8IZY5 108 aa17■□□□□ 0.31
SNRNP200-205ENST00000480835 SPICE1Q8N0Z3 855 aa17■□□□□ 0.31
SNRNP200-205ENST00000480835 BICD2Q8TD16 824 aa17■□□□□ 0.31
SNRNP200-205ENST00000480835 SPATA32Q96LK8 384 aa17■□□□□ 0.31
SNRNP200-205ENST00000480835 ZMYND12Q9H0C1 365 aa17■□□□□ 0.31
SNRNP200-205ENST00000480835 POLR3EQ9NVU0 708 aa17■□□□□ 0.31
SNRNP200-205ENST00000480835 TFIP11Q9UBB9 837 aaKnown RBP17■□□□□ 0.31
SNRNP200-205ENST00000480835 RCOR1Q9UKL0 485 aa17■□□□□ 0.31
SNRNP200-205ENST00000480835 MBD3O95983 291 aa16.99■□□□□ 0.31
SNRNP200-205ENST00000480835 BACE1P56817 501 aa16.99■□□□□ 0.31
SNRNP200-205ENST00000480835 SPP2Q13103 211 aa16.99■□□□□ 0.31
SNRNP200-205ENST00000480835 ZYXQ15942 572 aaKnown RBP16.99■□□□□ 0.31
SNRNP200-205ENST00000480835 CDC37Q16543 378 aaPredicted RBP16.99■□□□□ 0.31
SNRNP200-205ENST00000480835 QRICH1Q2TAL8 776 aa16.99■□□□□ 0.31
SNRNP200-205ENST00000480835 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.99■□□□□ 0.31
SNRNP200-205ENST00000480835 ARMC9Q7Z3E5 817 aa16.99■□□□□ 0.31
SNRNP200-205ENST00000480835 LDHDQ86WU2 507 aa16.99■□□□□ 0.31
SNRNP200-205ENST00000480835 RBM46Q8TBY0 533 aaKnown RBP16.99■□□□□ 0.31
SNRNP200-205ENST00000480835 OXER1Q8TDS5 423 aa16.99■□□□□ 0.31
SNRNP200-205ENST00000480835 LEO1Q8WVC0 666 aaPredicted RBP16.99■□□□□ 0.31
SNRNP200-205ENST00000480835 TNFRSF25Q93038 417 aa16.99■□□□□ 0.31
SNRNP200-205ENST00000480835 C12orf42Q96LP6 360 aa16.99■□□□□ 0.31
SNRNP200-205ENST00000480835 USP28Q96RU2 1077 aa16.99■□□□□ 0.31
SNRNP200-205ENST00000480835 GLT8D2Q9H1C3 349 aa16.99■□□□□ 0.31
SNRNP200-205ENST00000480835 RRAGCQ9HB90 399 aa16.99■□□□□ 0.31
SNRNP200-205ENST00000480835 GDPD2Q9HCC8 539 aa16.99■□□□□ 0.31
SNRNP200-205ENST00000480835 PRR12Q9ULL5 1215 aa16.99■□□□□ 0.31
SNRNP200-205ENST00000480835 NOL7Q9UMY1 257 aaKnown RBP16.99■□□□□ 0.31
SNRNP200-205ENST00000480835 SNCAIPQ9Y6H5 919 aa16.99■□□□□ 0.31
SNRNP200-205ENST00000480835 ZHX2Q9Y6X8 837 aa16.99■□□□□ 0.31
SNRNP200-205ENST00000480835 UNCXA6NJT0 531 aa16.98■□□□□ 0.31
SNRNP200-205ENST00000480835 TRAK2O60296 914 aa16.98■□□□□ 0.31
SNRNP200-205ENST00000480835 NASPP49321 788 aaPredicted RBP16.98■□□□□ 0.31
SNRNP200-205ENST00000480835 UBE2HP62256 183 aa16.98■□□□□ 0.31
SNRNP200-205ENST00000480835 NR5A1Q13285 461 aa16.98■□□□□ 0.31
SNRNP200-205ENST00000480835 MTMR2Q13614 643 aa16.98■□□□□ 0.31
SNRNP200-205ENST00000480835 PRKG1Q13976 671 aa16.98■□□□□ 0.31
SNRNP200-205ENST00000480835 VGLL4Q14135 290 aa16.98■□□□□ 0.31
SNRNP200-205ENST00000480835 ANO1Q5XXA6 986 aa16.98■□□□□ 0.31
SNRNP200-205ENST00000480835 TYW1BQ6NUM6 668 aa16.98■□□□□ 0.31
SNRNP200-205ENST00000480835 ANKRD13AQ8IZ07 590 aa16.98■□□□□ 0.31
SNRNP200-205ENST00000480835 SMCO2A6NFE2 343 aa16.97■□□□□ 0.31
SNRNP200-205ENST00000480835 M0R2N6 131 aa16.97■□□□□ 0.31
SNRNP200-205ENST00000480835 TRAPPC10P48553 1259 aa16.97■□□□□ 0.31
SNRNP200-205ENST00000480835 FBXO11Q86XK2 927 aa16.97■□□□□ 0.31
SNRNP200-205ENST00000480835 TEX2Q8IWB9 1127 aa16.97■□□□□ 0.31
SNRNP200-205ENST00000480835 AMNQ9BXJ7 453 aa16.97■□□□□ 0.31
SNRNP200-205ENST00000480835 EMILIN3Q9NT22 766 aa16.97■□□□□ 0.31
SNRNP200-205ENST00000480835 FZD1Q9UP38 647 aa16.97■□□□□ 0.31
SNRNP200-205ENST00000480835 AFG3L2Q9Y4W6 797 aa16.97■□□□□ 0.31
SNRNP200-205ENST00000480835 DDX49Q9Y6V7 483 aaKnown RBP16.97■□□□□ 0.31
SNRNP200-205ENST00000480835 PTPRFP10586 1907 aa16.97■□□□□ 0.31
SNRNP200-205ENST00000480835 PARP14Q460N5 1801 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms