RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 CERS5Q8N5B7 392 aa6.02□□□□□ -1.45
PTCD3-213ENST00000480102 GOLGA6L1Q8N7Z2 621 aa6.02□□□□□ -1.45
PTCD3-213ENST00000480102 TRPM4Q8TD43 1214 aa6.02□□□□□ -1.45
PTCD3-213ENST00000480102 HOOK2Q96ED9 719 aa6.02□□□□□ -1.45
PTCD3-213ENST00000480102 NEUROD4Q9HD90 331 aa6.02□□□□□ -1.45
PTCD3-213ENST00000480102 KCNQ5Q9NR82 932 aa6.02□□□□□ -1.45
PTCD3-213ENST00000480102 ZMIZ1Q9ULJ6 1067 aa6.02□□□□□ -1.45
PTCD3-213ENST00000480102 PNMA6EA0A0J9YXQ4 647 aa6.01□□□□□ -1.45
PTCD3-213ENST00000480102 A0A1B0GUL7 405 aa6.01□□□□□ -1.45
PTCD3-213ENST00000480102 WTIPA6NIX2 430 aaPredicted RBP6.01□□□□□ -1.45
PTCD3-213ENST00000480102 ARAFP10398 606 aa6.01□□□□□ -1.45
PTCD3-213ENST00000480102 WEE1P30291 646 aa6.01□□□□□ -1.45
PTCD3-213ENST00000480102 ECE1P42892 770 aa6.01□□□□□ -1.45
PTCD3-213ENST00000480102 KCNMA1Q12791 1236 aa6.01□□□□□ -1.45
PTCD3-213ENST00000480102 DLGAP5Q15398 846 aa6.01□□□□□ -1.45
PTCD3-213ENST00000480102 SUPT20HL1Q3ZLR7 823 aa6.01□□□□□ -1.45
PTCD3-213ENST00000480102 EAPPQ56P03 285 aaPredicted RBP6.01□□□□□ -1.45
PTCD3-213ENST00000480102 NOM1Q5C9Z4 860 aaKnown RBP6.01□□□□□ -1.45
PTCD3-213ENST00000480102 CST9Q5W186 159 aa6.01□□□□□ -1.45
PTCD3-213ENST00000480102 MAP1SQ66K74 1059 aaPredicted RBP6.01□□□□□ -1.45
PTCD3-213ENST00000480102 SPTY2D1Q68D10 685 aaPredicted RBP6.01□□□□□ -1.45
PTCD3-213ENST00000480102 SLCO4C1Q6ZQN7 724 aa6.01□□□□□ -1.45
PTCD3-213ENST00000480102 ITPRIPQ8IWB1 547 aa6.01□□□□□ -1.45
PTCD3-213ENST00000480102 TEKT1Q969V4 418 aa6.01□□□□□ -1.45
PTCD3-213ENST00000480102 HSH2DQ96JZ2 352 aa6.01□□□□□ -1.45
PTCD3-213ENST00000480102 MARK1Q9P0L2 795 aa6.01□□□□□ -1.45
PTCD3-213ENST00000480102 GAKO14976 1311 aa6□□□□□ -1.45
PTCD3-213ENST00000480102 PCNTO95613 3336 aa6□□□□□ -1.45
PTCD3-213ENST00000480102 ATG7O95352 703 aa6□□□□□ -1.45
PTCD3-213ENST00000480102 GYG1P46976 350 aa6□□□□□ -1.45
PTCD3-213ENST00000480102 MARSP56192 900 aaKnown RBP6□□□□□ -1.45
PTCD3-213ENST00000480102 INHBEP58166 350 aa6□□□□□ -1.45
PTCD3-213ENST00000480102 MAP2K1Q02750 393 aaPredicted RBP6□□□□□ -1.45
PTCD3-213ENST00000480102 NOGQ13253 232 aa6□□□□□ -1.45
PTCD3-213ENST00000480102 HIF1AQ16665 826 aa6□□□□□ -1.45
PTCD3-213ENST00000480102 SWI5Q1ZZU3 235 aa6□□□□□ -1.45
PTCD3-213ENST00000480102 LDLRAD1Q5T700 205 aa6□□□□□ -1.45
PTCD3-213ENST00000480102 C1orf229Q6ZS94 237 aaPredicted RBP6□□□□□ -1.45
PTCD3-213ENST00000480102 C2orf69Q8N8R5 385 aa6□□□□□ -1.45
PTCD3-213ENST00000480102 GALNT6Q8NCL4 622 aa6□□□□□ -1.45
PTCD3-213ENST00000480102 NEDD1Q8NHV4 660 aa6□□□□□ -1.45
PTCD3-213ENST00000480102 PBXIP1Q96AQ6 731 aa6□□□□□ -1.45
PTCD3-213ENST00000480102 KIF1BPQ96EK5 621 aa6□□□□□ -1.45
PTCD3-213ENST00000480102 SUSD3Q96L08 255 aa6□□□□□ -1.45
PTCD3-213ENST00000480102 IDI2Q9BXS1 227 aa6□□□□□ -1.45
PTCD3-213ENST00000480102 AVENQ9NQS1 362 aaPredicted RBP6□□□□□ -1.45
PTCD3-213ENST00000480102 GGA3Q9NZ52 723 aa6□□□□□ -1.45
PTCD3-213ENST00000480102 COL2A1P02458 1487 aaPredicted RBP6□□□□□ -1.45
PTCD3-213ENST00000480102 SHISA8B8ZZ34 492 aa5.99□□□□□ -1.45
PTCD3-213ENST00000480102 SNAP23O00161 211 aa5.99□□□□□ -1.45
PTCD3-213ENST00000480102 EGFRP00533 1210 aa5.99□□□□□ -1.45
PTCD3-213ENST00000480102 NF2P35240 595 aa5.99□□□□□ -1.45
PTCD3-213ENST00000480102 CRKP46108 304 aa5.99□□□□□ -1.45
PTCD3-213ENST00000480102 TNNI2P48788 182 aa5.99□□□□□ -1.45
PTCD3-213ENST00000480102 GSK3AP49840 483 aa5.99□□□□□ -1.45
PTCD3-213ENST00000480102 TYRO3Q06418 890 aa5.99□□□□□ -1.45
PTCD3-213ENST00000480102 RTN1Q16799 776 aa5.99□□□□□ -1.45
PTCD3-213ENST00000480102 DEFB115Q30KQ5 88 aa5.99□□□□□ -1.45
PTCD3-213ENST00000480102 NBPF9Q3BBW0 867 aa5.99□□□□□ -1.45
PTCD3-213ENST00000480102 TBC1D10BQ4KMP7 808 aaPredicted RBP5.99□□□□□ -1.45
PTCD3-213ENST00000480102 TNNI3KQ59H18 835 aa5.99□□□□□ -1.45
PTCD3-213ENST00000480102 CCDC158Q5M9N0 1113 aa5.99□□□□□ -1.45
PTCD3-213ENST00000480102 ZNF468Q5VIY5 522 aaPredicted RBP5.99□□□□□ -1.45
PTCD3-213ENST00000480102 ANGEL2Q5VTE6 544 aaKnown RBP5.99□□□□□ -1.45
PTCD3-213ENST00000480102 APOBEC3HQ6NTF7 200 aaKnown RBP5.99□□□□□ -1.45
PTCD3-213ENST00000480102 KIAA0825Q8IV33 1275 aa5.99□□□□□ -1.45
PTCD3-213ENST00000480102 SIRT2Q8IXJ6 389 aa5.99□□□□□ -1.45
PTCD3-213ENST00000480102 ZNF280CQ8ND82 737 aa5.99□□□□□ -1.45
PTCD3-213ENST00000480102 KLHDC4Q8TBB5 520 aa5.99□□□□□ -1.45
PTCD3-213ENST00000480102 STK32AQ8WU08 396 aa5.99□□□□□ -1.45
PTCD3-213ENST00000480102 EDARADDQ8WWZ3 215 aa5.99□□□□□ -1.45
PTCD3-213ENST00000480102 SCARF2Q96GP6 870 aaPredicted RBP5.99□□□□□ -1.45
PTCD3-213ENST00000480102 GPR101Q96P66 508 aaPredicted RBP5.99□□□□□ -1.45
PTCD3-213ENST00000480102 DEFB129Q9H1M3 183 aa5.99□□□□□ -1.45
PTCD3-213ENST00000480102 DCTPP1Q9H773 170 aa5.99□□□□□ -1.45
PTCD3-213ENST00000480102 GBA2Q9HCG7 927 aaPredicted RBP5.99□□□□□ -1.45
PTCD3-213ENST00000480102 SAGE1Q9NXZ1 904 aa5.99□□□□□ -1.45
PTCD3-213ENST00000480102 TTF2Q9UNY4 1162 aaKnown RBP5.99□□□□□ -1.45
PTCD3-213ENST00000480102 PA2G4Q9UQ80 394 aaKnown RBP5.99□□□□□ -1.45
PTCD3-213ENST00000480102 FPGT-TNNI3KV9GXZ4 949 aa5.99□□□□□ -1.45
PTCD3-213ENST00000480102 RFX7Q2KHR2 1363 aa5.98□□□□□ -1.45
PTCD3-213ENST00000480102 ATRNL1Q5VV63 1379 aa5.98□□□□□ -1.45
PTCD3-213ENST00000480102 GPR75-ASB3A0A0A6YYF3 556 aa5.98□□□□□ -1.45
PTCD3-213ENST00000480102 ENTPD3O75355 529 aa5.98□□□□□ -1.45
PTCD3-213ENST00000480102 FRAT2O75474 233 aaPredicted RBP5.98□□□□□ -1.45
PTCD3-213ENST00000480102 SURF6O75683 361 aaKnown RBP5.98□□□□□ -1.45
PTCD3-213ENST00000480102 CELF2O95319 508 aaKnown RBP5.98□□□□□ -1.45
PTCD3-213ENST00000480102 LDHBP07195 334 aaKnown RBP5.98□□□□□ -1.45
PTCD3-213ENST00000480102 LDHCP07864 332 aa5.98□□□□□ -1.45
PTCD3-213ENST00000480102 ZBTB48P10074 688 aaPredicted RBP5.98□□□□□ -1.45
PTCD3-213ENST00000480102 PDIA4P13667 645 aaKnown RBP5.98□□□□□ -1.45
PTCD3-213ENST00000480102 ADH6P28332 368 aa5.98□□□□□ -1.45
PTCD3-213ENST00000480102 RRP1P56182 461 aaKnown RBP5.98□□□□□ -1.45
PTCD3-213ENST00000480102 GSTO1P78417 241 aa5.98□□□□□ -1.45
PTCD3-213ENST00000480102 TFCP2Q12800 502 aa5.98□□□□□ -1.45
PTCD3-213ENST00000480102 SFSWAPQ12872 951 aaKnown RBP5.98□□□□□ -1.45
PTCD3-213ENST00000480102 HDAC1Q13547 482 aaPredicted RBP5.98□□□□□ -1.45
PTCD3-213ENST00000480102 RASGRF1Q13972 1273 aa5.98□□□□□ -1.45
PTCD3-213ENST00000480102 TTF1Q15361 905 aaPredicted RBP5.98□□□□□ -1.45
PTCD3-213ENST00000480102 CFAP100Q494V2 611 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms