RNA–Protein interactions for RNA: ENST00000479994.1

HCLS1-206, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 3

Gene HCLS1, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-206ENST00000479994 FAM109BQ6ICB4 259 aaPredicted RBP13.42□□□□□ -0.26
HCLS1-206ENST00000479994 ZNF280CQ8ND82 737 aa13.42□□□□□ -0.26
HCLS1-206ENST00000479994 INTS4Q96HW7 963 aaKnown RBP13.42□□□□□ -0.26
HCLS1-206ENST00000479994 GMCL1Q96IK5 515 aa13.42□□□□□ -0.26
HCLS1-206ENST00000479994 CLMNQ96JQ2 1002 aa13.42□□□□□ -0.26
HCLS1-206ENST00000479994 FEZ1Q99689 392 aa13.42□□□□□ -0.26
HCLS1-206ENST00000479994 TMEM47Q9BQJ4 181 aa13.42□□□□□ -0.26
HCLS1-206ENST00000479994 LLPHQ9BRT6 129 aaKnown RBP13.42□□□□□ -0.26
HCLS1-206ENST00000479994 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.42□□□□□ -0.26
HCLS1-206ENST00000479994 ARHGAP39Q9C0H5 1083 aa13.42□□□□□ -0.26
HCLS1-206ENST00000479994 SPDYE5A6NIY4 337 aa13.41□□□□□ -0.26
HCLS1-206ENST00000479994 CXCL11O14625 94 aa13.41□□□□□ -0.26
HCLS1-206ENST00000479994 CPLX1O14810 134 aa13.41□□□□□ -0.26
HCLS1-206ENST00000479994 PFKFB2O60825 505 aa13.41□□□□□ -0.26
HCLS1-206ENST00000479994 ECM2O94769 699 aaPredicted RBP13.41□□□□□ -0.26
HCLS1-206ENST00000479994 INPP5BP32019 993 aa13.41□□□□□ -0.26
HCLS1-206ENST00000479994 ATP2B2Q01814 1243 aa13.41□□□□□ -0.26
HCLS1-206ENST00000479994 APOBRQ0VD83 1088 aa13.41□□□□□ -0.26
HCLS1-206ENST00000479994 TRAF1Q13077 416 aa13.41□□□□□ -0.26
HCLS1-206ENST00000479994 PPIL2Q13356 520 aa13.41□□□□□ -0.26
HCLS1-206ENST00000479994 USP17L2Q6R6M4 530 aa13.41□□□□□ -0.26
HCLS1-206ENST00000479994 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.41□□□□□ -0.26
HCLS1-206ENST00000479994 MAFAQ8NHW3 353 aaPredicted RBP13.41□□□□□ -0.26
HCLS1-206ENST00000479994 LRRC2Q9BYS8 371 aa13.41□□□□□ -0.26
HCLS1-206ENST00000479994 NAP1L2Q9ULW6 460 aaPredicted RBP13.41□□□□□ -0.26
HCLS1-206ENST00000479994 NCOR1O75376 2440 aa13.41□□□□□ -0.26
HCLS1-206ENST00000479994 GOLGA8AA7E2F4 631 aa13.4□□□□□ -0.26
HCLS1-206ENST00000479994 NMT2O60551 498 aa13.4□□□□□ -0.26
HCLS1-206ENST00000479994 PARP1P09874 1014 aaKnown RBP13.4□□□□□ -0.26
HCLS1-206ENST00000479994 CCL5P13501 91 aa13.4□□□□□ -0.26
HCLS1-206ENST00000479994 PDIA3P30101 505 aaKnown RBP13.4□□□□□ -0.26
HCLS1-206ENST00000479994 GUCY1A2P33402 732 aa13.4□□□□□ -0.26
HCLS1-206ENST00000479994 TROAPQ12815 778 aa13.4□□□□□ -0.26
HCLS1-206ENST00000479994 PABPC4Q13310 644 aaKnown RBP eCLIP13.4□□□□□ -0.26
HCLS1-206ENST00000479994 RTN1Q16799 776 aa13.4□□□□□ -0.26
HCLS1-206ENST00000479994 FANCBQ8NB91 859 aa13.4□□□□□ -0.26
HCLS1-206ENST00000479994 GTF3C6Q969F1 213 aa13.4□□□□□ -0.26
HCLS1-206ENST00000479994 ZKSCAN4Q969J2 545 aaPredicted RBP13.4□□□□□ -0.26
HCLS1-206ENST00000479994 TMX3Q96JJ7 454 aa13.4□□□□□ -0.26
HCLS1-206ENST00000479994 TCEANC2Q96MN5 208 aa13.4□□□□□ -0.26
HCLS1-206ENST00000479994 VCPKMTQ9H867 229 aa13.4□□□□□ -0.26
HCLS1-206ENST00000479994 TMOD4Q9NZQ9 345 aa13.4□□□□□ -0.26
HCLS1-206ENST00000479994 PNMA2Q9UL42 364 aa13.4□□□□□ -0.26
HCLS1-206ENST00000479994 ZMYND8Q9ULU4 1186 aaPredicted RBP13.4□□□□□ -0.26
HCLS1-206ENST00000479994 SNCAIPQ9Y6H5 919 aa13.4□□□□□ -0.26
HCLS1-206ENST00000479994 PARP14Q460N5 1801 aa13.39□□□□□ -0.27
HCLS1-206ENST00000479994 TESPA1A2RU30 521 aaPredicted RBP13.39□□□□□ -0.27
HCLS1-206ENST00000479994 WDR46O15213 610 aaKnown RBP13.39□□□□□ -0.27
HCLS1-206ENST00000479994 PLA2G6O60733 806 aa13.39□□□□□ -0.27
HCLS1-206ENST00000479994 FDX1P10109 184 aa13.39□□□□□ -0.27
HCLS1-206ENST00000479994 GJA5P36382 358 aa13.39□□□□□ -0.27
HCLS1-206ENST00000479994 BACE1P56817 501 aa13.39□□□□□ -0.27
HCLS1-206ENST00000479994 HMGN5P82970 282 aaKnown RBP13.39□□□□□ -0.27
HCLS1-206ENST00000479994 GRM4Q14833 912 aa13.39□□□□□ -0.27
HCLS1-206ENST00000479994 FASTKD5Q7L8L6 764 aaKnown RBP13.39□□□□□ -0.27
HCLS1-206ENST00000479994 MICU3Q86XE3 530 aa13.39□□□□□ -0.27
HCLS1-206ENST00000479994 TRIM22Q8IYM9 498 aa13.39□□□□□ -0.27
HCLS1-206ENST00000479994 FAM177A1Q8N128 213 aaPredicted RBP13.39□□□□□ -0.27
HCLS1-206ENST00000479994 PROCA1Q8NCQ7 364 aaPredicted RBP13.39□□□□□ -0.27
HCLS1-206ENST00000479994 RGS22Q8NE09 1264 aa13.39□□□□□ -0.27
HCLS1-206ENST00000479994 U2AF1L4Q8WU68 220 aaKnown RBP13.39□□□□□ -0.27
HCLS1-206ENST00000479994 WASF1Q92558 559 aa13.39□□□□□ -0.27
HCLS1-206ENST00000479994 C12orf42Q96LP6 360 aa13.39□□□□□ -0.27
HCLS1-206ENST00000479994 RNF208Q9H0X6 261 aa13.39□□□□□ -0.27
HCLS1-206ENST00000479994 TPCN1Q9ULQ1 816 aa13.39□□□□□ -0.27
HCLS1-206ENST00000479994 ZHX2Q9Y6X8 837 aa13.39□□□□□ -0.27
HCLS1-206ENST00000479994 F5H6K3 240 aa13.38□□□□□ -0.27
HCLS1-206ENST00000479994 SNHG28P0DPA3 235 aa13.38□□□□□ -0.27
HCLS1-206ENST00000479994 SLC1A4P43007 532 aa13.38□□□□□ -0.27
HCLS1-206ENST00000479994 MAGEA10P43363 369 aaPredicted RBP13.38□□□□□ -0.27
HCLS1-206ENST00000479994 AKAP17AQ02040 695 aaKnown RBP13.38□□□□□ -0.27
HCLS1-206ENST00000479994 KLRC3Q07444 240 aa13.38□□□□□ -0.27
HCLS1-206ENST00000479994 CUL4AQ13619 759 aa13.38□□□□□ -0.27
HCLS1-206ENST00000479994 RRP1BQ14684 758 aaKnown RBP13.38□□□□□ -0.27
HCLS1-206ENST00000479994 SH3D19Q5HYK7 790 aa13.38□□□□□ -0.27
HCLS1-206ENST00000479994 SLFN13Q68D06 897 aa13.38□□□□□ -0.27
HCLS1-206ENST00000479994 FAM160B2Q86V87 743 aa13.38□□□□□ -0.27
HCLS1-206ENST00000479994 CHURC1Q8WUH1 139 aa13.38□□□□□ -0.27
HCLS1-206ENST00000479994 NUP133Q8WUM0 1156 aa13.38□□□□□ -0.27
HCLS1-206ENST00000479994 CWC22Q9HCG8 908 aaKnown RBP13.38□□□□□ -0.27
HCLS1-206ENST00000479994 BRPF3Q9ULD4 1205 aa13.38□□□□□ -0.27
HCLS1-206ENST00000479994 AFG3L2Q9Y4W6 797 aa13.38□□□□□ -0.27
HCLS1-206ENST00000479994 PDHBP11177 359 aa13.37□□□□□ -0.27
HCLS1-206ENST00000479994 BMP3P12645 472 aa13.37□□□□□ -0.27
HCLS1-206ENST00000479994 PDCP20941 246 aa13.37□□□□□ -0.27
HCLS1-206ENST00000479994 GTF2A2P52657 109 aa13.37□□□□□ -0.27
HCLS1-206ENST00000479994 PRMT2P55345 433 aa13.37□□□□□ -0.27
HCLS1-206ENST00000479994 SPP2Q13103 211 aa13.37□□□□□ -0.27
HCLS1-206ENST00000479994 SNAPC2Q13487 334 aa13.37□□□□□ -0.27
HCLS1-206ENST00000479994 ME3Q16798 604 aa13.37□□□□□ -0.27
HCLS1-206ENST00000479994 LRRC47Q8N1G4 583 aaKnown RBP13.37□□□□□ -0.27
HCLS1-206ENST00000479994 ELP3Q9H9T3 547 aa13.37□□□□□ -0.27
HCLS1-206ENST00000479994 FEM1BQ9UK73 627 aa13.37□□□□□ -0.27
HCLS1-206ENST00000479994 KCNH4Q9UQ05 1017 aa13.37□□□□□ -0.27
HCLS1-206ENST00000479994 MYPNQ86TC9 1320 aa13.37□□□□□ -0.27
HCLS1-206ENST00000479994 STK36Q9NRP7 1315 aa13.37□□□□□ -0.27
HCLS1-206ENST00000479994 PALM3A6NDB9 673 aaPredicted RBP13.36□□□□□ -0.27
HCLS1-206ENST00000479994 hCG_1984214I3L0E3 225 aa13.36□□□□□ -0.27
HCLS1-206ENST00000479994 NDUFB10O96000 172 aa13.36□□□□□ -0.27
HCLS1-206ENST00000479994 CETPP11597 493 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms