RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 HOXD10P28358 340 aa29.22■■■□□ 2.27
PERM1-203ENST00000479361 MAPK4P31152 587 aa29.22■■■□□ 2.27
PERM1-203ENST00000479361 FGD1P98174 961 aa29.22■■■□□ 2.27
PERM1-203ENST00000479361 PLS1Q14651 629 aa29.22■■■□□ 2.27
PERM1-203ENST00000479361 TRIM47Q96LD4 638 aa29.22■■■□□ 2.27
PERM1-203ENST00000479361 TM6SF1Q9BZW5 370 aa29.22■■■□□ 2.27
PERM1-203ENST00000479361 ARHGAP39Q9C0H5 1083 aa29.22■■■□□ 2.27
PERM1-203ENST00000479361 SPATC1LQ9H0A9 340 aa29.22■■■□□ 2.27
PERM1-203ENST00000479361 A0A0G2JMZ2 1700 aa29.22■■■□□ 2.27
PERM1-203ENST00000479361 TNPO2O14787 897 aaKnown RBP29.21■■■□□ 2.27
PERM1-203ENST00000479361 ECM2O94769 699 aaPredicted RBP29.21■■■□□ 2.27
PERM1-203ENST00000479361 TMEM132BQ14DG7 1078 aa29.21■■■□□ 2.27
PERM1-203ENST00000479361 PKN2Q16513 984 aaKnown RBP29.21■■■□□ 2.27
PERM1-203ENST00000479361 TTBK2Q6IQ55 1244 aa29.21■■■□□ 2.27
PERM1-203ENST00000479361 OTOP1Q7RTM1 612 aa29.21■■■□□ 2.27
PERM1-203ENST00000479361 SLC38A10Q9HBR0 1119 aa29.21■■■□□ 2.27
PERM1-203ENST00000479361 GPHNQ9NQX3 736 aaPredicted RBP29.21■■■□□ 2.27
PERM1-203ENST00000479361 PRR12Q9ULL5 1215 aa29.21■■■□□ 2.27
PERM1-203ENST00000479361 DDAH1O94760 285 aa29.2■■■□□ 2.26
PERM1-203ENST00000479361 RPS6KB1P23443 525 aa29.2■■■□□ 2.26
PERM1-203ENST00000479361 TROAPQ12815 778 aa29.2■■■□□ 2.26
PERM1-203ENST00000479361 SYDE2Q5VT97 1194 aa29.2■■■□□ 2.26
PERM1-203ENST00000479361 SGMS1Q86VZ5 419 aa29.2■■■□□ 2.26
PERM1-203ENST00000479361 ZNF654Q8IZM8 581 aa29.2■■■□□ 2.26
PERM1-203ENST00000479361 COA7Q96BR5 231 aa29.2■■■□□ 2.26
PERM1-203ENST00000479361 TCEANC2Q96MN5 208 aa29.2■■■□□ 2.26
PERM1-203ENST00000479361 CWC22Q9HCG8 908 aaKnown RBP29.2■■■□□ 2.26
PERM1-203ENST00000479361 GOLGA8HP0CJ92 632 aa29.19■■■□□ 2.26
PERM1-203ENST00000479361 CTGFP29279 349 aa29.19■■■□□ 2.26
PERM1-203ENST00000479361 SLC16A2P36021 539 aa29.19■■■□□ 2.26
PERM1-203ENST00000479361 OAZ1P54368 228 aa29.19■■■□□ 2.26
PERM1-203ENST00000479361 REPS2Q8NFH8 660 aa29.19■■■□□ 2.26
PERM1-203ENST00000479361 MAP3K14Q99558 947 aa29.19■■■□□ 2.26
PERM1-203ENST00000479361 MOV10L1Q9BXT6 1211 aaKnown RBP29.19■■■□□ 2.26
PERM1-203ENST00000479361 TEX13BQ9BXU2 312 aa29.19■■■□□ 2.26
PERM1-203ENST00000479361 ZSWIM6Q9HCJ5 1215 aa29.19■■■□□ 2.26
PERM1-203ENST00000479361 ZNF214Q9UL59 606 aaPredicted RBP29.19■■■□□ 2.26
PERM1-203ENST00000479361 SLC12A7Q9Y666 1083 aa29.19■■■□□ 2.26
PERM1-203ENST00000479361 CYP46A1Q9Y6A2 500 aa29.19■■■□□ 2.26
PERM1-203ENST00000479361 ATP2A1O14983 1001 aa29.18■■■□□ 2.26
PERM1-203ENST00000479361 SLC25A27O95847 323 aa29.18■■■□□ 2.26
PERM1-203ENST00000479361 CALM1P0DP23 149 aa29.18■■■□□ 2.26
PERM1-203ENST00000479361 CALM2P0DP24 149 aa29.18■■■□□ 2.26
PERM1-203ENST00000479361 CALM3P0DP25 149 aa29.18■■■□□ 2.26
PERM1-203ENST00000479361 CPA1P15085 419 aa29.18■■■□□ 2.26
PERM1-203ENST00000479361 COPB2P35606 906 aa29.18■■■□□ 2.26
PERM1-203ENST00000479361 STAT3P40763 770 aa29.18■■■□□ 2.26
PERM1-203ENST00000479361 PRMT2P55345 433 aa29.18■■■□□ 2.26
PERM1-203ENST00000479361 CAP1Q01518 475 aa29.18■■■□□ 2.26
PERM1-203ENST00000479361 GRM4Q14833 912 aa29.18■■■□□ 2.26
PERM1-203ENST00000479361 SYNE3Q6ZMZ3 975 aa29.18■■■□□ 2.26
PERM1-203ENST00000479361 RUFY3Q7L099 469 aa29.18■■■□□ 2.26
PERM1-203ENST00000479361 SHCBP1Q8NEM2 672 aa29.18■■■□□ 2.26
PERM1-203ENST00000479361 PORCNQ9H237 461 aa29.18■■■□□ 2.26
PERM1-203ENST00000479361 COL13A1Q5TAT6 717 aaPredicted RBP29.17■■■□□ 2.26
PERM1-203ENST00000479361 NUP133Q8WUM0 1156 aa29.17■■■□□ 2.26
PERM1-203ENST00000479361 MROH8Q9H579 483 aa29.17■■■□□ 2.26
PERM1-203ENST00000479361 KIF5BP33176 963 aa29.16■■■□□ 2.26
PERM1-203ENST00000479361 WDR78Q5VTH9 848 aa29.16■■■□□ 2.26
PERM1-203ENST00000479361 RIOX2Q8IUF8 465 aa29.16■■■□□ 2.26
PERM1-203ENST00000479361 CPXCR1Q8N123 301 aa29.16■■■□□ 2.26
PERM1-203ENST00000479361 FBXL16Q8N461 479 aa29.16■■■□□ 2.26
PERM1-203ENST00000479361 CTCFLQ8NI51 663 aaPredicted RBP29.16■■■□□ 2.26
PERM1-203ENST00000479361 UPF2Q9HAU5 1272 aaKnown RBP29.16■■■□□ 2.26
PERM1-203ENST00000479361 SRRDQ9UH36 339 aa29.16■■■□□ 2.26
PERM1-203ENST00000479361 MAD2L2Q9UI95 211 aa29.16■■■□□ 2.26
PERM1-203ENST00000479361 PALM3A6NDB9 673 aaPredicted RBP29.15■■■□□ 2.26
PERM1-203ENST00000479361 KLRF2D3W0D1 207 aa29.15■■■□□ 2.26
PERM1-203ENST00000479361 SNRNP48Q6IEG0 339 aaKnown RBP29.15■■■□□ 2.26
PERM1-203ENST00000479361 Q6ZUG5 572 aa29.15■■■□□ 2.26
PERM1-203ENST00000479361 GPR142Q7Z601 462 aa29.15■■■□□ 2.26
PERM1-203ENST00000479361 PLEKHH3Q7Z736 793 aa29.15■■■□□ 2.26
PERM1-203ENST00000479361 NCAPG2Q86XI2 1143 aa29.15■■■□□ 2.26
PERM1-203ENST00000479361 IL17RAQ96F46 866 aa29.15■■■□□ 2.26
PERM1-203ENST00000479361 RANBP17Q9H2T7 1088 aaKnown RBP29.15■■■□□ 2.26
PERM1-203ENST00000479361 IVNS1ABPQ9Y6Y0 642 aa29.15■■■□□ 2.26
PERM1-203ENST00000479361 ERCC3P19447 782 aa29.14■■■□□ 2.26
PERM1-203ENST00000479361 STAG2Q8N3U4 1231 aa29.14■■■□□ 2.26
PERM1-203ENST00000479361 MYL10Q9BUA6 226 aa29.14■■■□□ 2.26
PERM1-203ENST00000479361 UBA5Q9GZZ9 404 aa29.14■■■□□ 2.26
PERM1-203ENST00000479361 RAVER2Q9HCJ3 691 aaKnown RBP29.14■■■□□ 2.26
PERM1-203ENST00000479361 PNMA2Q9UL42 364 aa29.14■■■□□ 2.26
PERM1-203ENST00000479361 MGAMO43451 1857 aa29.13■■■□□ 2.25
PERM1-203ENST00000479361 FBXO46Q6PJ61 603 aaPredicted RBP29.13■■■□□ 2.25
PERM1-203ENST00000479361 APOA5Q6Q788 366 aa29.13■■■□□ 2.25
PERM1-203ENST00000479361 SOCS4Q8WXH5 440 aa29.13■■■□□ 2.25
PERM1-203ENST00000479361 UPF3BQ9BZI7 483 aaKnown RBP29.13■■■□□ 2.25
PERM1-203ENST00000479361 PTPN22Q9Y2R2 807 aa29.13■■■□□ 2.25
PERM1-203ENST00000479361 COL11A1P12107 1806 aaPredicted RBP29.13■■■□□ 2.25
PERM1-203ENST00000479361 DHX16O60231 1041 aaKnown RBP29.12■■■□□ 2.25
PERM1-203ENST00000479361 GNAQP50148 359 aa29.12■■■□□ 2.25
PERM1-203ENST00000479361 CCDC174Q6PII3 467 aa29.12■■■□□ 2.25
PERM1-203ENST00000479361 ADGRF4Q8IZF3 695 aa29.12■■■□□ 2.25
PERM1-203ENST00000479361 AGXT2Q9BYV1 514 aa29.12■■■□□ 2.25
PERM1-203ENST00000479361 ZSWIM8A7E2V4 1837 aa29.12■■■□□ 2.25
PERM1-203ENST00000479361 KLF18A0A0U1RQI7 1052 aa29.11■■■□□ 2.25
PERM1-203ENST00000479361 ZBTB43O43298 467 aa29.11■■■□□ 2.25
PERM1-203ENST00000479361 STRNO43815 780 aa29.11■■■□□ 2.25
PERM1-203ENST00000479361 SNAP25P60880 206 aa29.11■■■□□ 2.25
PERM1-203ENST00000479361 PRKCZQ05513 592 aa29.11■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms