RNA–Protein interactions for RNA: ENST00000479162.5

NUP35-209, Transcript of nucleoporin 35, humanhuman

TSL 2

Gene NUP35, Length 2,828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-209ENST00000479162 MAATS1Q7Z4T9 603 aa11.64□□□□□ -0.55
NUP35-209ENST00000479162 GDAP1Q8TB36 358 aa11.64□□□□□ -0.55
NUP35-209ENST00000479162 CDCA7Q9BWT1 371 aaPredicted RBP11.64□□□□□ -0.55
NUP35-209ENST00000479162 DMAP1Q9NPF5 467 aaPredicted RBP11.64□□□□□ -0.55
NUP35-209ENST00000479162 ABCF3Q9NUQ8 709 aa11.64□□□□□ -0.55
NUP35-209ENST00000479162 ZNF148Q9UQR1 794 aa11.64□□□□□ -0.55
NUP35-209ENST00000479162 POLE2P56282 527 aa11.64□□□□□ -0.55
NUP35-209ENST00000479162 MKRN4PQ13434 485 aaPredicted RBP11.64□□□□□ -0.55
NUP35-209ENST00000479162 CASP8Q14790 479 aa11.64□□□□□ -0.55
NUP35-209ENST00000479162 ERICH1Q86X53 443 aa11.64□□□□□ -0.55
NUP35-209ENST00000479162 KLHDC4Q8TBB5 520 aa11.64□□□□□ -0.55
NUP35-209ENST00000479162 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.64□□□□□ -0.556e-8■■■■□ 26.7
NUP35-209ENST00000479162 ZNF570Q96NI8 536 aa11.64□□□□□ -0.55
NUP35-209ENST00000479162 UPF3BQ9BZI7 483 aaKnown RBP11.64□□□□□ -0.55
NUP35-209ENST00000479162 SUCLA2Q9P2R7 463 aaPredicted RBP11.64□□□□□ -0.55
NUP35-209ENST00000479162 DCCP43146 1447 aa11.63□□□□□ -0.55
NUP35-209ENST00000479162 HIP1RO75146 1068 aa11.63□□□□□ -0.55
NUP35-209ENST00000479162 VIMP08670 466 aaKnown RBP11.63□□□□□ -0.55
NUP35-209ENST00000479162 CCT6AP40227 531 aaKnown RBP11.63□□□□□ -0.55
NUP35-209ENST00000479162 PPFIA1Q13136 1202 aa11.63□□□□□ -0.55
NUP35-209ENST00000479162 BIRC3Q13489 604 aa11.63□□□□□ -0.55
NUP35-209ENST00000479162 SEPT7Q16181 437 aaKnown RBP11.63□□□□□ -0.55
NUP35-209ENST00000479162 SHROOM1Q2M3G4 852 aaPredicted RBP11.63□□□□□ -0.55
NUP35-209ENST00000479162 SLC44A4Q53GD3 710 aa11.63□□□□□ -0.55
NUP35-209ENST00000479162 EXOC3L1Q86VI1 746 aa11.63□□□□□ -0.55
NUP35-209ENST00000479162 SYT2Q8N9I0 419 aaPredicted RBP11.63□□□□□ -0.55
NUP35-209ENST00000479162 TMEM87AQ8NBN3 555 aa11.63□□□□□ -0.55
NUP35-209ENST00000479162 LEO1Q8WVC0 666 aaPredicted RBP11.63□□□□□ -0.55
NUP35-209ENST00000479162 SPATA17Q96L03 361 aa11.63□□□□□ -0.55
NUP35-209ENST00000479162 TTC14Q96N46 770 aa11.63□□□□□ -0.55
NUP35-209ENST00000479162 GPR101Q96P66 508 aaPredicted RBP11.63□□□□□ -0.55
NUP35-209ENST00000479162 PUS3Q9BZE2 481 aaKnown RBP11.63□□□□□ -0.55
NUP35-209ENST00000479162 OCEL1Q9H607 264 aa11.63□□□□□ -0.55
NUP35-209ENST00000479162 DDX21Q9NR30 783 aaKnown RBP eCLIP11.63□□□□□ -0.55
NUP35-209ENST00000479162 SEPT10Q9P0V9 454 aa11.63□□□□□ -0.55
NUP35-209ENST00000479162 L3MBTL1Q9Y468 752 aa11.63□□□□□ -0.55
NUP35-209ENST00000479162 ANP32DO95626 131 aa11.63□□□□□ -0.55
NUP35-209ENST00000479162 POTEIP0CG38 1075 aa11.63□□□□□ -0.55
NUP35-209ENST00000479162 KIF5BP33176 963 aa11.63□□□□□ -0.55
NUP35-209ENST00000479162 PPP2R3AQ06190 1150 aa11.63□□□□□ -0.55
NUP35-209ENST00000479162 KLC1Q07866 573 aa11.63□□□□□ -0.55
NUP35-209ENST00000479162 SLC2A7Q6PXP3 512 aa11.63□□□□□ -0.55
NUP35-209ENST00000479162 PANK1Q8TE04 598 aa11.63□□□□□ -0.55
NUP35-209ENST00000479162 USP6NLQ92738 828 aa11.63□□□□□ -0.55
NUP35-209ENST00000479162 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.62□□□□□ -0.55
NUP35-209ENST00000479162 POTEFA5A3E0 1075 aa11.62□□□□□ -0.55
NUP35-209ENST00000479162 TTC34A8MYJ7 566 aa11.62□□□□□ -0.55
NUP35-209ENST00000479162 PRPF6O94906 941 aaKnown RBP11.62□□□□□ -0.55
NUP35-209ENST00000479162 MYBL1P10243 752 aa11.62□□□□□ -0.55
NUP35-209ENST00000479162 NLRP5P59047 1200 aa11.62□□□□□ -0.55
NUP35-209ENST00000479162 UBE2HP62256 183 aa11.62□□□□□ -0.55
NUP35-209ENST00000479162 GKAP1Q5VSY0 366 aaPredicted RBP11.62□□□□□ -0.55
NUP35-209ENST00000479162 SRPK1Q96SB4 655 aaKnown RBP11.62□□□□□ -0.55
NUP35-209ENST00000479162 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.62□□□□□ -0.55
NUP35-209ENST00000479162 DPPA5A6NC42 116 aa11.62□□□□□ -0.55
NUP35-209ENST00000479162 A6NNZ2 444 aa11.62□□□□□ -0.55
NUP35-209ENST00000479162 ST18O60284 1047 aa11.62□□□□□ -0.55
NUP35-209ENST00000479162 CCNCP24863 283 aa11.62□□□□□ -0.55
NUP35-209ENST00000479162 S100A5P33763 92 aa11.62□□□□□ -0.55
NUP35-209ENST00000479162 SAFBQ15424 915 aaKnown RBP eCLIP11.62□□□□□ -0.55
NUP35-209ENST00000479162 TUBB8Q3ZCM7 444 aa11.62□□□□□ -0.55
NUP35-209ENST00000479162 BOLA3Q53S33 107 aa11.62□□□□□ -0.55
NUP35-209ENST00000479162 DAAM2Q86T65 1068 aa11.62□□□□□ -0.55
NUP35-209ENST00000479162 ZNF554Q86TJ5 538 aa11.62□□□□□ -0.55
NUP35-209ENST00000479162 RAB11FIP4Q86YS3 637 aa11.62□□□□□ -0.55
NUP35-209ENST00000479162 ACMSDQ8TDX5 336 aa11.62□□□□□ -0.55
NUP35-209ENST00000479162 SH3TC2Q8TF17 1288 aa11.62□□□□□ -0.55
NUP35-209ENST00000479162 CNKSR1Q969H4 720 aa11.62□□□□□ -0.55
NUP35-209ENST00000479162 RPGRIP1Q96KN7 1286 aa11.62□□□□□ -0.55
NUP35-209ENST00000479162 PRAM1Q96QH2 718 aa11.62□□□□□ -0.55
NUP35-209ENST00000479162 HAUS7Q99871 368 aa11.62□□□□□ -0.55
NUP35-209ENST00000479162 NOP53Q9NZM5 478 aaKnown RBP11.62□□□□□ -0.55
NUP35-209ENST00000479162 FAM135BQ49AJ0 1406 aa11.61□□□□□ -0.55
NUP35-209ENST00000479162 TEX28O15482 410 aa11.61□□□□□ -0.55
NUP35-209ENST00000479162 FOXD2O60548 495 aaPredicted RBP11.61□□□□□ -0.55
NUP35-209ENST00000479162 AARSP49588 968 aaKnown RBP eCLIP11.61□□□□□ -0.55
NUP35-209ENST00000479162 TCERG1LQ5VWI1 586 aa11.61□□□□□ -0.55
NUP35-209ENST00000479162 DRC3Q9H069 523 aa11.61□□□□□ -0.55
NUP35-209ENST00000479162 NOD2Q9HC29 1040 aa11.61□□□□□ -0.55
NUP35-209ENST00000479162 ZNF180Q9UJW8 692 aa11.61□□□□□ -0.55
NUP35-209ENST00000479162 ABCC11Q96J66 1382 aa11.61□□□□□ -0.55
NUP35-209ENST00000479162 ARHGEF28Q8N1W1 1705 aaKnown RBP11.61□□□□□ -0.55
NUP35-209ENST00000479162 N4BP3O15049 544 aa11.61□□□□□ -0.55
NUP35-209ENST00000479162 PDE6CP51160 858 aa11.61□□□□□ -0.55
NUP35-209ENST00000479162 COX10Q12887 443 aa11.61□□□□□ -0.55
NUP35-209ENST00000479162 C3orf67Q6ZVT6 689 aa11.61□□□□□ -0.55
NUP35-209ENST00000479162 CHD1LQ86WJ1 897 aa11.61□□□□□ -0.55
NUP35-209ENST00000479162 PALB2Q86YC2 1186 aa11.61□□□□□ -0.55
NUP35-209ENST00000479162 IGSF22Q8N9C0 903 aa11.61□□□□□ -0.55
NUP35-209ENST00000479162 GPATCH3Q96I76 525 aa11.61□□□□□ -0.55
NUP35-209ENST00000479162 GDPD2Q9HCC8 539 aa11.61□□□□□ -0.55
NUP35-209ENST00000479162 VCX3AQ9NNX9 186 aa11.61□□□□□ -0.55
NUP35-209ENST00000479162 IGSF5Q9NSI5 407 aa11.61□□□□□ -0.55
NUP35-209ENST00000479162 DCAF16Q9NXF7 216 aa11.61□□□□□ -0.55
NUP35-209ENST00000479162 CDC42BPGQ6DT37 1551 aa11.61□□□□□ -0.55
NUP35-209ENST00000479162 ACTN4O43707 911 aaKnown RBP11.6□□□□□ -0.55
NUP35-209ENST00000479162 CSPG5O95196 566 aa11.6□□□□□ -0.55
NUP35-209ENST00000479162 ATP6V1G2O95670 118 aa11.6□□□□□ -0.55
NUP35-209ENST00000479162 KRT14P02533 472 aa11.6□□□□□ -0.55
NUP35-209ENST00000479162 HSPA4P34932 840 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms