RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 SLAIN1Q8ND83 568 aa31.36■■■□□ 2.61
CCM2-211ENST00000478582 CHURC1Q8WUH1 139 aa31.36■■■□□ 2.61
CCM2-211ENST00000478582 LY9Q9HBG7 655 aa31.36■■■□□ 2.61
CCM2-211ENST00000478582 TMEM232C9JQI7 657 aa31.35■■■□□ 2.61
CCM2-211ENST00000478582 SH2B2O14492 632 aaPredicted RBP31.35■■■□□ 2.61
CCM2-211ENST00000478582 ADCY3O60266 1144 aa31.35■■■□□ 2.61
CCM2-211ENST00000478582 PEX10O60683 326 aa31.35■■■□□ 2.61
CCM2-211ENST00000478582 CNMDO75829 334 aa31.35■■■□□ 2.61
CCM2-211ENST00000478582 LIFRP42702 1097 aa31.35■■■□□ 2.61
CCM2-211ENST00000478582 PXYLP1Q8TE99 480 aa31.35■■■□□ 2.61
CCM2-211ENST00000478582 ATG4CQ96DT6 458 aa31.35■■■□□ 2.61
CCM2-211ENST00000478582 JAKMIP1Q96N16 626 aaKnown RBP31.35■■■□□ 2.61
CCM2-211ENST00000478582 PARP14Q460N5 1801 aa31.35■■■□□ 2.61
CCM2-211ENST00000478582 MYCP01106 439 aaPredicted RBP31.34■■■□□ 2.61
CCM2-211ENST00000478582 STAT2P52630 851 aa31.34■■■□□ 2.61
CCM2-211ENST00000478582 ERVK-9P63128 1117 aa31.34■■■□□ 2.61
CCM2-211ENST00000478582 ERVK-24P63145 666 aa31.34■■■□□ 2.61
CCM2-211ENST00000478582 ZNF543Q08ER8 600 aa31.34■■■□□ 2.61
CCM2-211ENST00000478582 Q3C1V9 767 aa31.34■■■□□ 2.61
CCM2-211ENST00000478582 KCTD1Q719H9 257 aa31.34■■■□□ 2.61
CCM2-211ENST00000478582 RASGRP2Q7LDG7 609 aa31.34■■■□□ 2.61
CCM2-211ENST00000478582 PAGR1Q9BTK6 254 aa31.34■■■□□ 2.61
CCM2-211ENST00000478582 SENP2Q9HC62 589 aa31.34■■■□□ 2.61
CCM2-211ENST00000478582 BTBD7Q9P203 1132 aa31.34■■■□□ 2.61
CCM2-211ENST00000478582 MTMR7Q9Y216 660 aa31.34■■■□□ 2.61
CCM2-211ENST00000478582 ANAPC15P60006 121 aa31.33■■■□□ 2.61
CCM2-211ENST00000478582 GPATCH4Q5T3I0 446 aaKnown RBP31.33■■■□□ 2.61
CCM2-211ENST00000478582 BTNL9Q6UXG8 535 aa31.33■■■□□ 2.61
CCM2-211ENST00000478582 TM6SF1Q9BZW5 370 aa31.33■■■□□ 2.61
CCM2-211ENST00000478582 BIN2Q9UBW5 565 aaPredicted RBP31.33■■■□□ 2.61
CCM2-211ENST00000478582 GJD2Q9UKL4 321 aa31.33■■■□□ 2.61
CCM2-211ENST00000478582 VWA5AO00534 786 aa31.32■■■□□ 2.6
CCM2-211ENST00000478582 EN2P19622 333 aaPredicted RBP31.32■■■□□ 2.6
CCM2-211ENST00000478582 UBXN2AP68543 259 aa31.32■■■□□ 2.6
CCM2-211ENST00000478582 MTFR1Q15390 333 aa31.32■■■□□ 2.6
CCM2-211ENST00000478582 CCDC96Q2M329 555 aa31.32■■■□□ 2.6
CCM2-211ENST00000478582 BLOC1S2Q6QNY1 142 aa31.32■■■□□ 2.6
CCM2-211ENST00000478582 IL17RAQ96F46 866 aa31.32■■■□□ 2.6
CCM2-211ENST00000478582 GPHNQ9NQX3 736 aaPredicted RBP31.32■■■□□ 2.6
CCM2-211ENST00000478582 A0A0G2JMZ2 1700 aa31.32■■■□□ 2.6
CCM2-211ENST00000478582 FDX1P10109 184 aa31.31■■■□□ 2.6
CCM2-211ENST00000478582 MAPK4P31152 587 aa31.31■■■□□ 2.6
CCM2-211ENST00000478582 CHMP4CQ96CF2 233 aa31.31■■■□□ 2.6
CCM2-211ENST00000478582 ZSWIM6Q9HCJ5 1215 aa31.31■■■□□ 2.6
CCM2-211ENST00000478582 TROAPQ12815 778 aa31.3■■■□□ 2.6
CCM2-211ENST00000478582 ASPRV1Q53RT3 343 aa31.3■■■□□ 2.6
CCM2-211ENST00000478582 SGMS1Q86VZ5 419 aa31.3■■■□□ 2.6
CCM2-211ENST00000478582 REPS2Q8NFH8 660 aa31.3■■■□□ 2.6
CCM2-211ENST00000478582 LRRC2Q9BYS8 371 aa31.3■■■□□ 2.6
CCM2-211ENST00000478582 ISY1Q9ULR0 285 aaKnown RBP31.3■■■□□ 2.6
CCM2-211ENST00000478582 FRMPD2Q68DX3 1309 aaPredicted RBP31.29■■■□□ 2.6
CCM2-211ENST00000478582 ELNP15502 786 aa31.29■■■□□ 2.6
CCM2-211ENST00000478582 RPS6KB1P23443 525 aa31.29■■■□□ 2.6
CCM2-211ENST00000478582 TTBK2Q6IQ55 1244 aa31.29■■■□□ 2.6
CCM2-211ENST00000478582 SAMD1Q6SPF0 538 aaPredicted RBP31.29■■■□□ 2.6
CCM2-211ENST00000478582 CATIPQ7Z7H3 387 aa31.29■■■□□ 2.6
CCM2-211ENST00000478582 CCAR1Q8IX12 1150 aaKnown RBP31.29■■■□□ 2.6
CCM2-211ENST00000478582 FBXL16Q8N461 479 aa31.29■■■□□ 2.6
CCM2-211ENST00000478582 KIFC2Q96AC6 838 aa31.29■■■□□ 2.6
CCM2-211ENST00000478582 GPCPD1Q9NPB8 672 aa31.29■■■□□ 2.6
CCM2-211ENST00000478582 CASTP20810 708 aaKnown RBP31.28■■■□□ 2.6
CCM2-211ENST00000478582 CCNA1P78396 465 aa31.28■■■□□ 2.6
CCM2-211ENST00000478582 MAP3K14Q99558 947 aa31.28■■■□□ 2.6
CCM2-211ENST00000478582 PORCNQ9H237 461 aa31.28■■■□□ 2.6
CCM2-211ENST00000478582 SLC38A10Q9HBR0 1119 aa31.28■■■□□ 2.6
CCM2-211ENST00000478582 CCDC69A6NI79 296 aa31.27■■■□□ 2.6
CCM2-211ENST00000478582 ATP2A1O14983 1001 aa31.27■■■□□ 2.6
CCM2-211ENST00000478582 ZBED4O75132 1171 aa31.27■■■□□ 2.6
CCM2-211ENST00000478582 PARP1P09874 1014 aaKnown RBP31.27■■■□□ 2.6
CCM2-211ENST00000478582 CCL5P13501 91 aa31.27■■■□□ 2.6
CCM2-211ENST00000478582 CPA1P15085 419 aa31.27■■■□□ 2.6
CCM2-211ENST00000478582 IKQ13123 557 aaPredicted RBP31.27■■■□□ 2.6
CCM2-211ENST00000478582 TMEM132BQ14DG7 1078 aa31.27■■■□□ 2.6
CCM2-211ENST00000478582 RUFY3Q7L099 469 aa31.27■■■□□ 2.6
CCM2-211ENST00000478582 ZNF654Q8IZM8 581 aa31.27■■■□□ 2.6
CCM2-211ENST00000478582 TCEANC2Q96MN5 208 aa31.27■■■□□ 2.6
CCM2-211ENST00000478582 SPATC1LQ9H0A9 340 aa31.27■■■□□ 2.6
CCM2-211ENST00000478582 PRR12Q9ULL5 1215 aa31.27■■■□□ 2.6
CCM2-211ENST00000478582 DDAH1O94760 285 aa31.26■■■□□ 2.59
CCM2-211ENST00000478582 NFXL1Q6ZNB6 911 aa31.26■■■□□ 2.59
CCM2-211ENST00000478582 NUDT12Q9BQG2 462 aa31.26■■■□□ 2.59
CCM2-211ENST00000478582 ZNF214Q9UL59 606 aaPredicted RBP31.26■■■□□ 2.59
CCM2-211ENST00000478582 PALM3A6NDB9 673 aaPredicted RBP31.25■■■□□ 2.59
CCM2-211ENST00000478582 INHAP05111 366 aa31.25■■■□□ 2.59
CCM2-211ENST00000478582 GOLGA8HP0CJ92 632 aa31.25■■■□□ 2.59
CCM2-211ENST00000478582 GRM4Q14833 912 aa31.25■■■□□ 2.59
CCM2-211ENST00000478582 SYDE2Q5VT97 1194 aa31.25■■■□□ 2.59
CCM2-211ENST00000478582 GPR142Q7Z601 462 aa31.25■■■□□ 2.59
CCM2-211ENST00000478582 SHCBP1Q8NEM2 672 aa31.25■■■□□ 2.59
CCM2-211ENST00000478582 MOV10L1Q9BXT6 1211 aaKnown RBP31.25■■■□□ 2.59
CCM2-211ENST00000478582 AGXT2Q9BYV1 514 aa31.25■■■□□ 2.59
CCM2-211ENST00000478582 RNF208Q9H0X6 261 aa31.25■■■□□ 2.59
CCM2-211ENST00000478582 MAD2L2Q9UI95 211 aa31.25■■■□□ 2.59
CCM2-211ENST00000478582 CYP46A1Q9Y6A2 500 aa31.25■■■□□ 2.59
CCM2-211ENST00000478582 PLXNB2O15031 1838 aa31.25■■■□□ 2.59
CCM2-211ENST00000478582 TNRC18O15417 2968 aaPredicted RBP31.25■■■□□ 2.59
CCM2-211ENST00000478582 GJB1P08034 283 aa31.24■■■□□ 2.59
CCM2-211ENST00000478582 SLC16A2P36021 539 aa31.24■■■□□ 2.59
CCM2-211ENST00000478582 OAZ1P54368 228 aa31.24■■■□□ 2.59
CCM2-211ENST00000478582 PLEKHH3Q7Z736 793 aa31.24■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms