RNA–Protein interactions for RNA: ENST00000477928.1

SOX2-OT-208, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 902 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-208ENST00000477928 MTMR7Q9Y216 660 aa16.34■□□□□ 0.21
SOX2-OT-208ENST00000477928 TSPY2A6NKD2 308 aa16.33■□□□□ 0.2
SOX2-OT-208ENST00000477928 RANBP6O60518 1105 aaKnown RBP16.33■□□□□ 0.2
SOX2-OT-208ENST00000477928 ANO1Q5XXA6 986 aa16.33■□□□□ 0.2
SOX2-OT-208ENST00000477928 SLFN13Q68D06 897 aa16.33■□□□□ 0.2
SOX2-OT-208ENST00000477928 DPF3Q92784 378 aa16.33■□□□□ 0.2
SOX2-OT-208ENST00000477928 RAVER2Q9HCJ3 691 aaKnown RBP16.33■□□□□ 0.2
SOX2-OT-208ENST00000477928 TOMM22Q9NS69 142 aa16.33■□□□□ 0.2
SOX2-OT-208ENST00000477928 ISY1Q9ULR0 285 aaKnown RBP16.33■□□□□ 0.2
SOX2-OT-208ENST00000477928 STX8Q9UNK0 236 aa16.33■□□□□ 0.2
SOX2-OT-208ENST00000477928 PARP14Q460N5 1801 aa16.33■□□□□ 0.2
SOX2-OT-208ENST00000477928 MCCP23508 829 aa16.32■□□□□ 0.2
SOX2-OT-208ENST00000477928 COPB2P35606 906 aa16.32■□□□□ 0.2
SOX2-OT-208ENST00000477928 STAT3P40763 770 aa16.32■□□□□ 0.2
SOX2-OT-208ENST00000477928 NEDD4P46934 1319 aa16.32■□□□□ 0.2
SOX2-OT-208ENST00000477928 NOVP48745 357 aa16.32■□□□□ 0.2
SOX2-OT-208ENST00000477928 SNRNP48Q6IEG0 339 aaKnown RBP16.32■□□□□ 0.2
SOX2-OT-208ENST00000477928 DPP9Q86TI2 863 aa16.32■□□□□ 0.2
SOX2-OT-208ENST00000477928 RIOX2Q8IUF8 465 aa16.32■□□□□ 0.2
SOX2-OT-208ENST00000477928 CPXCR1Q8N123 301 aa16.32■□□□□ 0.2
SOX2-OT-208ENST00000477928 STAG1Q8WVM7 1258 aa16.32■□□□□ 0.2
SOX2-OT-208ENST00000477928 MROH8Q9H579 483 aa16.32■□□□□ 0.2
SOX2-OT-208ENST00000477928 TCP11L1Q9NUJ3 509 aa16.32■□□□□ 0.2
SOX2-OT-208ENST00000477928 OGDHLQ9ULD0 1010 aa16.32■□□□□ 0.2
SOX2-OT-208ENST00000477928 PFASO15067 1338 aa16.31■□□□□ 0.2
SOX2-OT-208ENST00000477928 TMEM232C9JQI7 657 aa16.31■□□□□ 0.2
SOX2-OT-208ENST00000477928 ZNF213O14771 459 aa16.31■□□□□ 0.2
SOX2-OT-208ENST00000477928 FDX1P10109 184 aa16.31■□□□□ 0.2
SOX2-OT-208ENST00000477928 CYBAP13498 195 aa16.31■□□□□ 0.2
SOX2-OT-208ENST00000477928 AKNAD1Q5T1N1 836 aa16.31■□□□□ 0.2
SOX2-OT-208ENST00000477928 MFSD14CQ5VZR4 134 aa16.31■□□□□ 0.2
SOX2-OT-208ENST00000477928 KCTD1Q719H9 257 aa16.31■□□□□ 0.2
SOX2-OT-208ENST00000477928 CEP290O15078 2479 aa16.31■□□□□ 0.2
SOX2-OT-208ENST00000477928 LAMA4Q16363 1823 aa16.31■□□□□ 0.2
SOX2-OT-208ENST00000477928 STRNO43815 780 aa16.3■□□□□ 0.2
SOX2-OT-208ENST00000477928 SLC25A27O95847 323 aa16.3■□□□□ 0.2
SOX2-OT-208ENST00000477928 BMP3P12645 472 aa16.3■□□□□ 0.2
SOX2-OT-208ENST00000477928 CNGA1P29973 690 aa16.3■□□□□ 0.2
SOX2-OT-208ENST00000477928 CCDC178Q5BJE1 867 aa16.3■□□□□ 0.2
SOX2-OT-208ENST00000477928 ERICH6BQ5W0A0 696 aa16.3■□□□□ 0.2
SOX2-OT-208ENST00000477928 MFSD6Q6ZSS7 791 aa16.3■□□□□ 0.2
SOX2-OT-208ENST00000477928 PRPF38AQ8NAV1 312 aaKnown RBP16.3■□□□□ 0.2
SOX2-OT-208ENST00000477928 MAML3Q96JK9 1138 aa16.3■□□□□ 0.2
SOX2-OT-208ENST00000477928 MMP19Q99542 508 aa16.3■□□□□ 0.2
SOX2-OT-208ENST00000477928 COLQQ9Y215 455 aaPredicted RBP16.3■□□□□ 0.2
SOX2-OT-208ENST00000477928 PLA2G6O60733 806 aa16.29■□□□□ 0.2
SOX2-OT-208ENST00000477928 NEFLP07196 543 aa16.29■□□□□ 0.2
SOX2-OT-208ENST00000477928 FCER1AP12319 257 aa16.29■□□□□ 0.2
SOX2-OT-208ENST00000477928 IMMTQ16891 758 aaKnown RBP16.29■□□□□ 0.2
SOX2-OT-208ENST00000477928 TTBK2Q6IQ55 1244 aa16.29■□□□□ 0.2
SOX2-OT-208ENST00000477928 ABRAQ8N0Z2 381 aa16.29■□□□□ 0.2
SOX2-OT-208ENST00000477928 LENG1Q96BZ8 264 aaPredicted RBP16.29■□□□□ 0.2
SOX2-OT-208ENST00000477928 GMCL1Q96IK5 515 aa16.29■□□□□ 0.2
SOX2-OT-208ENST00000477928 TTC14Q96N46 770 aa16.29■□□□□ 0.2
SOX2-OT-208ENST00000477928 ZKSCAN3Q9BRR0 538 aa16.29■□□□□ 0.2
SOX2-OT-208ENST00000477928 TEX13BQ9BXU2 312 aa16.29■□□□□ 0.2
SOX2-OT-208ENST00000477928 SLC38A10Q9HBR0 1119 aa16.29■□□□□ 0.2
SOX2-OT-208ENST00000477928 HOMER2Q9NSB8 354 aa16.29■□□□□ 0.2
SOX2-OT-208ENST00000477928 FEM1BQ9UK73 627 aa16.29■□□□□ 0.2
SOX2-OT-208ENST00000477928 DDX49Q9Y6V7 483 aaKnown RBP16.29■□□□□ 0.2
SOX2-OT-208ENST00000477928 RANBP2P49792 3224 aaKnown RBP16.29■□□□□ 0.2
SOX2-OT-208ENST00000477928 ZNF236Q9UL36 1845 aa16.29■□□□□ 0.2
SOX2-OT-208ENST00000477928 CHMLP26374 656 aa16.28■□□□□ 0.2
SOX2-OT-208ENST00000477928 SLC1A4P43007 532 aa16.28■□□□□ 0.2
SOX2-OT-208ENST00000477928 ZNF792Q3KQV3 632 aa16.28■□□□□ 0.2
SOX2-OT-208ENST00000477928 OLFML2BQ68BL8 750 aa16.28■□□□□ 0.2
SOX2-OT-208ENST00000477928 RCSD1Q6JBY9 416 aa16.28■□□□□ 0.2
SOX2-OT-208ENST00000477928 ESR2Q92731 530 aa16.28■□□□□ 0.2
SOX2-OT-208ENST00000477928 FGD4Q96M96 766 aa16.28■□□□□ 0.2
SOX2-OT-208ENST00000477928 AGBL1Q96MI9 1066 aa16.28■□□□□ 0.2
SOX2-OT-208ENST00000477928 HTATIP2Q9BUP3 242 aa16.28■□□□□ 0.2
SOX2-OT-208ENST00000477928 DDX20Q9UHI6 824 aaKnown RBP16.28■□□□□ 0.2
SOX2-OT-208ENST00000477928 ZNF536O15090 1300 aa16.27■□□□□ 0.2
SOX2-OT-208ENST00000477928 FRMPD2Q68DX3 1309 aaPredicted RBP16.27■□□□□ 0.2
SOX2-OT-208ENST00000477928 ATP2A1O14983 1001 aa16.27■□□□□ 0.2
SOX2-OT-208ENST00000477928 SLC16A2P36021 539 aa16.27■□□□□ 0.2
SOX2-OT-208ENST00000477928 OAZ1P54368 228 aa16.27■□□□□ 0.2
SOX2-OT-208ENST00000477928 IKQ13123 557 aaPredicted RBP16.27■□□□□ 0.2
SOX2-OT-208ENST00000477928 HABP4Q5JVS0 413 aaKnown RBP16.27■□□□□ 0.2
SOX2-OT-208ENST00000477928 CHRDL2Q6WN34 429 aa16.27■□□□□ 0.2
SOX2-OT-208ENST00000477928 NECAB2Q7Z6G3 386 aa16.27■□□□□ 0.2
SOX2-OT-208ENST00000477928 TMEM47Q9BQJ4 181 aa16.27■□□□□ 0.2
SOX2-OT-208ENST00000477928 C11orf49Q9H6J7 331 aa16.27■□□□□ 0.2
SOX2-OT-208ENST00000477928 CNNM2Q9H8M5 875 aa16.27■□□□□ 0.2
SOX2-OT-208ENST00000477928 SLC5A4Q9NY91 659 aa16.27■□□□□ 0.2
SOX2-OT-208ENST00000477928 TAF6LQ9Y6J9 622 aa16.27■□□□□ 0.2
SOX2-OT-208ENST00000477928 COL11A1P12107 1806 aaPredicted RBP16.26■□□□□ 0.19
SOX2-OT-208ENST00000477928 ZBED4O75132 1171 aa16.26■□□□□ 0.19
SOX2-OT-208ENST00000477928 COL6A1P12109 1028 aa16.26■□□□□ 0.19
SOX2-OT-208ENST00000477928 STAT2P52630 851 aa16.26■□□□□ 0.19
SOX2-OT-208ENST00000477928 KCTD2Q14681 263 aa16.26■□□□□ 0.19
SOX2-OT-208ENST00000477928 CCDC96Q2M329 555 aa16.26■□□□□ 0.19
SOX2-OT-208ENST00000477928 BMP2KLQ5H9B9 411 aa16.26■□□□□ 0.19
SOX2-OT-208ENST00000477928 CCDC174Q6PII3 467 aa16.26■□□□□ 0.19
SOX2-OT-208ENST00000477928 FAM160B2Q86V87 743 aa16.26■□□□□ 0.19
SOX2-OT-208ENST00000477928 C7orf61Q8IZ16 206 aa16.26■□□□□ 0.19
SOX2-OT-208ENST00000477928 ANKLE1Q8NAG6 615 aa16.26■□□□□ 0.19
SOX2-OT-208ENST00000477928 CHURC1Q8WUH1 139 aa16.26■□□□□ 0.19
SOX2-OT-208ENST00000477928 KRT23Q9C075 422 aa16.26■□□□□ 0.19
SOX2-OT-208ENST00000477928 PRR12Q9ULL5 1215 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms