RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 CACNA2D4Q7Z3S7 1137 aa10.97□□□□□ -0.65
CMC1-209ENST00000477739 SGMS1Q86VZ5 419 aa10.97□□□□□ -0.65
CMC1-209ENST00000477739 CSGALNACT2Q8N6G5 542 aa10.97□□□□□ -0.65
CMC1-209ENST00000477739 IQUBQ8NA54 791 aa10.97□□□□□ -0.65
CMC1-209ENST00000477739 CCDC148Q8NFR7 591 aa10.97□□□□□ -0.65
CMC1-209ENST00000477739 KRT18P05783 430 aaKnown RBP10.96□□□□□ -0.65
CMC1-209ENST00000477739 PTPREP23469 700 aa10.96□□□□□ -0.65
CMC1-209ENST00000477739 PDE4DQ08499 809 aa10.96□□□□□ -0.65
CMC1-209ENST00000477739 E2F4Q16254 413 aa10.96□□□□□ -0.65
CMC1-209ENST00000477739 STAG2Q8N3U4 1231 aa10.96□□□□□ -0.65
CMC1-209ENST00000477739 MAP3K14Q99558 947 aa10.96□□□□□ -0.65
CMC1-209ENST00000477739 FAM204AQ9H8W3 233 aa10.96□□□□□ -0.65
CMC1-209ENST00000477739 ADGRG1Q9Y653 693 aa10.96□□□□□ -0.65
CMC1-209ENST00000477739 SMIM23A6NLE4 172 aa10.96□□□□□ -0.65
CMC1-209ENST00000477739 CCNT1O60563 726 aaKnown RBP10.96□□□□□ -0.65
CMC1-209ENST00000477739 GUCY2FP51841 1108 aa10.96□□□□□ -0.65
CMC1-209ENST00000477739 ALX1Q15699 326 aa10.96□□□□□ -0.65
CMC1-209ENST00000477739 MICALL1Q8N3F8 863 aa10.96□□□□□ -0.65
CMC1-209ENST00000477739 BIN2Q9UBW5 565 aaPredicted RBP10.96□□□□□ -0.65
CMC1-209ENST00000477739 FRMPD2Q68DX3 1309 aaPredicted RBP10.96□□□□□ -0.66
CMC1-209ENST00000477739 BACH1O14867 736 aa10.96□□□□□ -0.66
CMC1-209ENST00000477739 NCK2O43639 380 aa10.96□□□□□ -0.66
CMC1-209ENST00000477739 STX10O60499 249 aa10.96□□□□□ -0.66
CMC1-209ENST00000477739 PPP6R2O75170 966 aa10.96□□□□□ -0.66
CMC1-209ENST00000477739 EPS15P42566 896 aa10.96□□□□□ -0.66
CMC1-209ENST00000477739 NAPAP54920 295 aa10.96□□□□□ -0.66
CMC1-209ENST00000477739 HLTFQ14527 1009 aaKnown RBP eCLIP10.96□□□□□ -0.66
CMC1-209ENST00000477739 SND1Q7KZF4 910 aaKnown RBP eCLIP10.96□□□□□ -0.66
CMC1-209ENST00000477739 ADAT2Q7Z6V5 191 aaKnown RBP10.96□□□□□ -0.66
CMC1-209ENST00000477739 C2CD5Q86YS7 1000 aa10.96□□□□□ -0.66
CMC1-209ENST00000477739 GPR161Q8N6U8 529 aaKnown RBP10.96□□□□□ -0.66
CMC1-209ENST00000477739 CELF1Q92879 486 aaKnown RBP10.96□□□□□ -0.66
CMC1-209ENST00000477739 ZSCAN10Q96SZ4 725 aaPredicted RBP10.96□□□□□ -0.66
CMC1-209ENST00000477739 GNPATO15228 680 aa10.95□□□□□ -0.66
CMC1-209ENST00000477739 NTSR2O95665 410 aa10.95□□□□□ -0.66
CMC1-209ENST00000477739 TSPY3P0CV98 308 aa10.95□□□□□ -0.66
CMC1-209ENST00000477739 TSPY8P0CW00 308 aa10.95□□□□□ -0.66
CMC1-209ENST00000477739 H2AFXP16104 143 aaPredicted RBP10.95□□□□□ -0.66
CMC1-209ENST00000477739 SYCP1Q15431 976 aa10.95□□□□□ -0.66
CMC1-209ENST00000477739 NTRK3Q16288 839 aa10.95□□□□□ -0.66
CMC1-209ENST00000477739 TBC1D10BQ4KMP7 808 aaPredicted RBP10.95□□□□□ -0.66
CMC1-209ENST00000477739 TCERG1LQ5VWI1 586 aa10.95□□□□□ -0.66
CMC1-209ENST00000477739 CCDC155Q8N6L0 562 aa10.95□□□□□ -0.66
CMC1-209ENST00000477739 STAG1Q8WVM7 1258 aa10.95□□□□□ -0.66
CMC1-209ENST00000477739 EHD4Q9H223 541 aa10.95□□□□□ -0.66
CMC1-209ENST00000477739 AGPAT5Q9NUQ2 364 aa10.95□□□□□ -0.66
CMC1-209ENST00000477739 BCS1LQ9Y276 419 aa10.95□□□□□ -0.66
CMC1-209ENST00000477739 KDM4FA0A1W2PPD8 638 aa10.95□□□□□ -0.66
CMC1-209ENST00000477739 PLEKP08567 350 aaPredicted RBP10.95□□□□□ -0.66
CMC1-209ENST00000477739 SLURP2P0DP57 97 aa10.95□□□□□ -0.66
CMC1-209ENST00000477739 HPDP32754 393 aaPredicted RBP10.95□□□□□ -0.66
CMC1-209ENST00000477739 PRCPP42785 496 aa10.95□□□□□ -0.66
CMC1-209ENST00000477739 TNNI2P48788 182 aa10.95□□□□□ -0.66
CMC1-209ENST00000477739 COPB1P53618 953 aaKnown RBP10.95□□□□□ -0.66
CMC1-209ENST00000477739 STIM1Q13586 685 aa10.95□□□□□ -0.66
CMC1-209ENST00000477739 SPA17Q15506 151 aa10.95□□□□□ -0.66
CMC1-209ENST00000477739 SPATA1Q5VX52 437 aa10.95□□□□□ -0.66
CMC1-209ENST00000477739 ZNF444Q8N0Y2 327 aaPredicted RBP10.95□□□□□ -0.66
CMC1-209ENST00000477739 TGFBRAP1Q8WUH2 860 aa10.95□□□□□ -0.66
CMC1-209ENST00000477739 MED15Q96RN5 788 aa10.95□□□□□ -0.66
CMC1-209ENST00000477739 CWC15Q9P013 229 aaKnown RBP10.95□□□□□ -0.66
CMC1-209ENST00000477739 PACSIN2Q9UNF0 486 aaPredicted RBP10.95□□□□□ -0.66
CMC1-209ENST00000477739 MRFAP1Q9Y605 127 aa10.95□□□□□ -0.66
CMC1-209ENST00000477739 TTC26A0AVF1 554 aa10.95□□□□□ -0.66
CMC1-209ENST00000477739 GYPCP04921 128 aa10.95□□□□□ -0.66
CMC1-209ENST00000477739 RPS8P62241 208 aaKnown RBP10.95□□□□□ -0.66
CMC1-209ENST00000477739 MKRN4PQ13434 485 aaPredicted RBP10.95□□□□□ -0.66
CMC1-209ENST00000477739 MEX3CQ5U5Q3 659 aaKnown RBP10.95□□□□□ -0.66
CMC1-209ENST00000477739 DTHD1Q6ZMT9 781 aa10.95□□□□□ -0.66
CMC1-209ENST00000477739 SRGAP1Q7Z6B7 1085 aa10.95□□□□□ -0.66
CMC1-209ENST00000477739 CCDC42Q96M95 316 aa10.95□□□□□ -0.66
CMC1-209ENST00000477739 CRNKL1Q9BZJ0 848 aaKnown RBP10.95□□□□□ -0.66
CMC1-209ENST00000477739 TRIM31Q9BZY9 425 aa10.95□□□□□ -0.66
CMC1-209ENST00000477739 GPCPD1Q9NPB8 672 aa10.95□□□□□ -0.66
CMC1-209ENST00000477739 SRP68Q9UHB9 627 aaKnown RBP10.95□□□□□ -0.66
CMC1-209ENST00000477739 STRCP1A6NGW2 1772 aa10.95□□□□□ -0.66
CMC1-209ENST00000477739 PHLPP2Q6ZVD8 1323 aa10.94□□□□□ -0.66
CMC1-209ENST00000477739 PARP4Q9UKK3 1724 aaKnown RBP10.94□□□□□ -0.66
CMC1-209ENST00000477739 ATP1A1P05023 1023 aaKnown RBP10.94□□□□□ -0.66
CMC1-209ENST00000477739 HIBADHP31937 336 aaKnown RBP10.94□□□□□ -0.66
CMC1-209ENST00000477739 LIG3P49916 1009 aa10.94□□□□□ -0.66
CMC1-209ENST00000477739 AMOTL1Q8IY63 956 aa10.94□□□□□ -0.66
CMC1-209ENST00000477739 NOC4LQ9BVI4 516 aaKnown RBP10.94□□□□□ -0.66
CMC1-209ENST00000477739 GOLPH3Q9H4A6 298 aa10.94□□□□□ -0.66
CMC1-209ENST00000477739 TUBE1Q9UJT0 475 aa10.94□□□□□ -0.66
CMC1-209ENST00000477739 MYO6Q9UM54 1294 aa10.94□□□□□ -0.66
CMC1-209ENST00000477739 PKD1L3Q7Z443 1732 aa10.94□□□□□ -0.66
CMC1-209ENST00000477739 MFAP3LO75121 409 aa10.94□□□□□ -0.66
CMC1-209ENST00000477739 FCER1AP12319 257 aa10.94□□□□□ -0.66
CMC1-209ENST00000477739 PRPF4BQ13523 1007 aaKnown RBP10.94□□□□□ -0.66
CMC1-209ENST00000477739 CASP8Q14790 479 aa10.94□□□□□ -0.66
CMC1-209ENST00000477739 RNF187Q5TA31 235 aaPredicted RBP10.94□□□□□ -0.66
CMC1-209ENST00000477739 HDXQ7Z353 690 aa10.94□□□□□ -0.66
CMC1-209ENST00000477739 CNGA4Q8IV77 575 aa10.94□□□□□ -0.66
CMC1-209ENST00000477739 TXLNBQ8N3L3 684 aa10.94□□□□□ -0.66
CMC1-209ENST00000477739 JAKMIP2Q96AA8 810 aa10.94□□□□□ -0.66
CMC1-209ENST00000477739 L2HGDHQ9H9P8 463 aa10.94□□□□□ -0.66
CMC1-209ENST00000477739 MLXIPQ9HAP2 919 aa10.94□□□□□ -0.66
CMC1-209ENST00000477739 EXOC1Q9NV70 894 aa10.94□□□□□ -0.66
CMC1-209ENST00000477739 CDC23Q9UJX2 597 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms