RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 EZH2Q15910 746 aaKnown RBP15.2■□□□□ 0.02
HLA-DMA-208ENST00000477541 RRP12Q5JTH9 1297 aaKnown RBP15.2■□□□□ 0.02
HLA-DMA-208ENST00000477541 COG1Q8WTW3 980 aa15.2■□□□□ 0.02
HLA-DMA-208ENST00000477541 CCDC85AQ96PX6 553 aaPredicted RBP15.2■□□□□ 0.02
HLA-DMA-208ENST00000477541 CAMKK2Q96RR4 588 aa15.2■□□□□ 0.02
HLA-DMA-208ENST00000477541 ZSCAN10Q96SZ4 725 aaPredicted RBP15.2■□□□□ 0.02
HLA-DMA-208ENST00000477541 ZNHIT6Q9NWK9 470 aaKnown RBP15.2■□□□□ 0.02
HLA-DMA-208ENST00000477541 ITGB4P16144 1822 aa15.2■□□□□ 0.02
HLA-DMA-208ENST00000477541 SHOX2O60902 331 aaPredicted RBP15.2■□□□□ 0.02
HLA-DMA-208ENST00000477541 IPO7O95373 1038 aaKnown RBP15.2■□□□□ 0.02
HLA-DMA-208ENST00000477541 CPP00450 1065 aa15.2■□□□□ 0.02
HLA-DMA-208ENST00000477541 RPN1P04843 607 aaKnown RBP15.2■□□□□ 0.02
HLA-DMA-208ENST00000477541 CCT6AP40227 531 aaKnown RBP15.2■□□□□ 0.02
HLA-DMA-208ENST00000477541 DNM2P50570 870 aa15.2■□□□□ 0.02
HLA-DMA-208ENST00000477541 CORO7P57737 925 aa15.2■□□□□ 0.02
HLA-DMA-208ENST00000477541 WWC2Q6AWC2 1192 aa15.2■□□□□ 0.02
HLA-DMA-208ENST00000477541 GBP6Q6ZN66 633 aa15.2■□□□□ 0.02
HLA-DMA-208ENST00000477541 ZNF572Q7Z3I7 529 aaPredicted RBP15.2■□□□□ 0.02
HLA-DMA-208ENST00000477541 IQCA1Q86XH1 822 aa15.2■□□□□ 0.02
HLA-DMA-208ENST00000477541 C10orf67Q8IYJ2 551 aa15.2■□□□□ 0.02
HLA-DMA-208ENST00000477541 LCORLQ8N3X6 602 aa15.2■□□□□ 0.02
HLA-DMA-208ENST00000477541 MB21D1Q8N884 522 aa15.2■□□□□ 0.02
HLA-DMA-208ENST00000477541 SLF1Q9BQI6 1058 aa15.2■□□□□ 0.02
HLA-DMA-208ENST00000477541 FAM204AQ9H8W3 233 aa15.2■□□□□ 0.02
HLA-DMA-208ENST00000477541 RSPH14Q9UHP6 348 aa15.2■□□□□ 0.02
HLA-DMA-208ENST00000477541 TRMT112Q9UI30 125 aaKnown RBP15.2■□□□□ 0.02
HLA-DMA-208ENST00000477541 HPCAL4Q9UM19 191 aa15.2■□□□□ 0.02
HLA-DMA-208ENST00000477541 LRRIQ3A6PVS8 624 aaPredicted RBP15.19■□□□□ 0.02
HLA-DMA-208ENST00000477541 RNF40O75150 1001 aa15.19■□□□□ 0.02
HLA-DMA-208ENST00000477541 PRPF6O94906 941 aaKnown RBP15.19■□□□□ 0.02
HLA-DMA-208ENST00000477541 ATP2B1P20020 1258 aa15.19■□□□□ 0.02
HLA-DMA-208ENST00000477541 CALML3P27482 149 aa15.19■□□□□ 0.02
HLA-DMA-208ENST00000477541 GYS2P54840 703 aa15.19■□□□□ 0.02
HLA-DMA-208ENST00000477541 UBXN1Q04323 297 aa15.19■□□□□ 0.02
HLA-DMA-208ENST00000477541 PTGDRQ13258 359 aa15.19■□□□□ 0.02
HLA-DMA-208ENST00000477541 FIGNQ5HY92 759 aa15.19■□□□□ 0.02
HLA-DMA-208ENST00000477541 TMTC3Q6ZXV5 915 aa15.19■□□□□ 0.02
HLA-DMA-208ENST00000477541 EFCAB13Q8IY85 973 aa15.19■□□□□ 0.02
HLA-DMA-208ENST00000477541 NOA1Q8NC60 698 aaKnown RBP15.19■□□□□ 0.02
HLA-DMA-208ENST00000477541 BRIP1Q9BX63 1249 aa15.19■□□□□ 0.02
HLA-DMA-208ENST00000477541 CUEDC2Q9H467 287 aa15.19■□□□□ 0.02
HLA-DMA-208ENST00000477541 VPS54Q9P1Q0 977 aa15.19■□□□□ 0.02
HLA-DMA-208ENST00000477541 ABCA3Q99758 1704 aa15.19■□□□□ 0.02
HLA-DMA-208ENST00000477541 LAMB1P07942 1786 aa15.18■□□□□ 0.02
HLA-DMA-208ENST00000477541 A0A0G2JS52 829 aa15.18■□□□□ 0.02
HLA-DMA-208ENST00000477541 EIF3CLB5ME19 914 aaKnown RBP15.18■□□□□ 0.02
HLA-DMA-208ENST00000477541 EIF5P55010 431 aaKnown RBP15.18■□□□□ 0.02
HLA-DMA-208ENST00000477541 FAM98CQ17RN3 349 aaKnown RBP15.18■□□□□ 0.02
HLA-DMA-208ENST00000477541 IFIT1BQ5T764 474 aaKnown RBP15.18■□□□□ 0.02
HLA-DMA-208ENST00000477541 LRRC31Q6UY01 552 aa15.18■□□□□ 0.02
HLA-DMA-208ENST00000477541 FAM114A1Q8IWE2 563 aa15.18■□□□□ 0.02
HLA-DMA-208ENST00000477541 DNAJC10Q8IXB1 793 aa15.18■□□□□ 0.02
HLA-DMA-208ENST00000477541 AMOTL1Q8IY63 956 aa15.18■□□□□ 0.02
HLA-DMA-208ENST00000477541 ADSSL1Q8N142 457 aa15.18■□□□□ 0.02
HLA-DMA-208ENST00000477541 ZNF507Q8TCN5 953 aa15.18■□□□□ 0.02
HLA-DMA-208ENST00000477541 EIF3CQ99613 913 aaKnown RBP15.18■□□□□ 0.02
HLA-DMA-208ENST00000477541 VPS16Q9H269 839 aa15.18■□□□□ 0.02
HLA-DMA-208ENST00000477541 INCENPQ9NQS7 918 aa15.18■□□□□ 0.02
HLA-DMA-208ENST00000477541 SH3GLB2Q9NR46 395 aa15.18■□□□□ 0.02
HLA-DMA-208ENST00000477541 TAB2Q9NYJ8 693 aa15.18■□□□□ 0.02
HLA-DMA-208ENST00000477541 NRAPQ86VF7 1730 aa15.18■□□□□ 0.02
HLA-DMA-208ENST00000477541 A0A0U1RQJ8 604 aa15.17■□□□□ 0.02
HLA-DMA-208ENST00000477541 A0A1W2PQJ5 194 aa15.17■□□□□ 0.02
HLA-DMA-208ENST00000477541 N4BP1O75113 896 aaKnown RBP15.17■□□□□ 0.02
HLA-DMA-208ENST00000477541 PARP1P09874 1014 aaKnown RBP15.17■□□□□ 0.02
HLA-DMA-208ENST00000477541 PRLRP16471 622 aa15.17■□□□□ 0.02
HLA-DMA-208ENST00000477541 DNAJC21Q5F1R6 531 aaKnown RBP15.17■□□□□ 0.02
HLA-DMA-208ENST00000477541 ENAHQ8N8S7 591 aaPredicted RBP15.17■□□□□ 0.02
HLA-DMA-208ENST00000477541 CABLES1Q8TDN4 633 aa15.17■□□□□ 0.02
HLA-DMA-208ENST00000477541 ATRIPQ8WXE1 791 aa15.17■□□□□ 0.02
HLA-DMA-208ENST00000477541 TRERF1Q96PN7 1200 aa15.17■□□□□ 0.02
HLA-DMA-208ENST00000477541 PURBQ96QR8 312 aaKnown RBP15.17■□□□□ 0.02
HLA-DMA-208ENST00000477541 ZKSCAN3Q9BRR0 538 aa15.17■□□□□ 0.02
HLA-DMA-208ENST00000477541 CRACR2AQ9BSW2 395 aa15.17■□□□□ 0.02
HLA-DMA-208ENST00000477541 PRDM11Q9NQV5 511 aa15.17■□□□□ 0.02
HLA-DMA-208ENST00000477541 MAGEC2Q9UBF1 373 aaPredicted RBP15.17■□□□□ 0.02
HLA-DMA-208ENST00000477541 REXO2Q9Y3B8 237 aaKnown RBP15.17■□□□□ 0.02
HLA-DMA-208ENST00000477541 CNTNAP5Q8WYK1 1306 aa15.17■□□□□ 0.02
HLA-DMA-208ENST00000477541 LAD1O00515 517 aa15.17■□□□□ 0.02
HLA-DMA-208ENST00000477541 PSMA7O14818 248 aa15.17■□□□□ 0.02
HLA-DMA-208ENST00000477541 SYF2O95926 243 aaKnown RBP15.17■□□□□ 0.02
HLA-DMA-208ENST00000477541 NOP2P46087 812 aaKnown RBP15.17■□□□□ 0.02
HLA-DMA-208ENST00000477541 NPY5RQ15761 445 aa15.17■□□□□ 0.02
HLA-DMA-208ENST00000477541 TTC31Q49AM3 519 aaPredicted RBP15.17■□□□□ 0.02
HLA-DMA-208ENST00000477541 CCDC122Q5T0U0 273 aa15.17■□□□□ 0.02
HLA-DMA-208ENST00000477541 SMYD4Q8IYR2 804 aaPredicted RBP15.17■□□□□ 0.02
HLA-DMA-208ENST00000477541 ZNF34Q8IZ26 560 aa15.17■□□□□ 0.02
HLA-DMA-208ENST00000477541 MMGT1Q8N4V1 131 aa15.17■□□□□ 0.02
HLA-DMA-208ENST00000477541 SMARCC1Q92922 1105 aaPredicted RBP15.17■□□□□ 0.02
HLA-DMA-208ENST00000477541 DHTKD1Q96HY7 919 aaPredicted RBP15.17■□□□□ 0.02
HLA-DMA-208ENST00000477541 LCMT1Q9UIC8 334 aa15.17■□□□□ 0.02
HLA-DMA-208ENST00000477541 GUCA1BQ9UMX6 200 aa15.17■□□□□ 0.02
HLA-DMA-208ENST00000477541 TTC26A0AVF1 554 aa15.16■□□□□ 0.02
HLA-DMA-208ENST00000477541 BICDL2A1A5D9 508 aa15.16■□□□□ 0.02
HLA-DMA-208ENST00000477541 PRKAB2O43741 272 aa15.16■□□□□ 0.02
HLA-DMA-208ENST00000477541 SRGNP10124 158 aa15.16■□□□□ 0.02
HLA-DMA-208ENST00000477541 IL6STP40189 918 aaPredicted RBP15.16■□□□□ 0.02
HLA-DMA-208ENST00000477541 ZBED6P86452 979 aa15.16■□□□□ 0.02
HLA-DMA-208ENST00000477541 TROAPQ12815 778 aa15.16■□□□□ 0.02
HLA-DMA-208ENST00000477541 ZNF174Q15697 407 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms