RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 FMNL1O95466 1100 aaPredicted RBP15.34■□□□□ 0.05
TOP3A-205ENST00000477508 PARP1P09874 1014 aaKnown RBP15.34■□□□□ 0.05
TOP3A-205ENST00000477508 PSMC4P43686 418 aa15.34■□□□□ 0.05
TOP3A-205ENST00000477508 OAZ1P54368 228 aa15.34■□□□□ 0.05
TOP3A-205ENST00000477508 NFXL1Q6ZNB6 911 aa15.34■□□□□ 0.05
TOP3A-205ENST00000477508 TNS4Q8IZW8 715 aa15.34■□□□□ 0.05
TOP3A-205ENST00000477508 COA7Q96BR5 231 aa15.34■□□□□ 0.05
TOP3A-205ENST00000477508 MAP3K14Q99558 947 aa15.34■□□□□ 0.05
TOP3A-205ENST00000477508 LY9Q9HBG7 655 aa15.34■□□□□ 0.05
TOP3A-205ENST00000477508 PNMA2Q9UL42 364 aa15.34■□□□□ 0.05
TOP3A-205ENST00000477508 PARP14Q460N5 1801 aa15.33■□□□□ 0.05
TOP3A-205ENST00000477508 ATP2A1O14983 1001 aa15.33■□□□□ 0.04
TOP3A-205ENST00000477508 CNMDO75829 334 aa15.33■□□□□ 0.04
TOP3A-205ENST00000477508 DDAH1O94760 285 aa15.33■□□□□ 0.04
TOP3A-205ENST00000477508 SLC25A27O95847 323 aa15.33■□□□□ 0.04
TOP3A-205ENST00000477508 CALM1P0DP23 149 aa15.33■□□□□ 0.04
TOP3A-205ENST00000477508 CALM2P0DP24 149 aa15.33■□□□□ 0.04
TOP3A-205ENST00000477508 CALM3P0DP25 149 aa15.33■□□□□ 0.04
TOP3A-205ENST00000477508 FGD1P98174 961 aa15.33■□□□□ 0.04
TOP3A-205ENST00000477508 SYNE3Q6ZMZ3 975 aa15.33■□□□□ 0.04
TOP3A-205ENST00000477508 SGMS1Q86VZ5 419 aa15.33■□□□□ 0.04
TOP3A-205ENST00000477508 FBXL16Q8N461 479 aa15.33■□□□□ 0.04
TOP3A-205ENST00000477508 SHCBP1Q8NEM2 672 aa15.33■□□□□ 0.04
TOP3A-205ENST00000477508 SPATC1LQ9H0A9 340 aa15.33■□□□□ 0.04
TOP3A-205ENST00000477508 MROH8Q9H579 483 aa15.33■□□□□ 0.04
TOP3A-205ENST00000477508 SLC38A10Q9HBR0 1119 aa15.33■□□□□ 0.04
TOP3A-205ENST00000477508 BTBD7Q9P203 1132 aa15.33■□□□□ 0.04
TOP3A-205ENST00000477508 TRIM17Q9Y577 477 aa15.33■□□□□ 0.04
TOP3A-205ENST00000477508 TNPO2O14787 897 aaKnown RBP15.32■□□□□ 0.04
TOP3A-205ENST00000477508 CASTP20810 708 aaKnown RBP15.32■□□□□ 0.04
TOP3A-205ENST00000477508 RPS6KB1P23443 525 aa15.32■□□□□ 0.04
TOP3A-205ENST00000477508 KIF5BP33176 963 aa15.32■□□□□ 0.04
TOP3A-205ENST00000477508 STAT3P40763 770 aa15.32■□□□□ 0.04
TOP3A-205ENST00000477508 TROAPQ12815 778 aa15.32■□□□□ 0.04
TOP3A-205ENST00000477508 TMEM132BQ14DG7 1078 aa15.32■□□□□ 0.04
TOP3A-205ENST00000477508 Q3C1V9 767 aa15.32■□□□□ 0.04
TOP3A-205ENST00000477508 SYDE2Q5VT97 1194 aa15.32■□□□□ 0.04
TOP3A-205ENST00000477508 POTEEQ6S8J3 1075 aa15.32■□□□□ 0.04
TOP3A-205ENST00000477508 OTOP1Q7RTM1 612 aa15.32■□□□□ 0.04
TOP3A-205ENST00000477508 TRIM47Q96LD4 638 aa15.32■□□□□ 0.04
TOP3A-205ENST00000477508 TEX13BQ9BXU2 312 aa15.32■□□□□ 0.04
TOP3A-205ENST00000477508 UPF2Q9HAU5 1272 aaKnown RBP15.32■□□□□ 0.04
TOP3A-205ENST00000477508 CWC22Q9HCG8 908 aaKnown RBP15.32■□□□□ 0.04
TOP3A-205ENST00000477508 ZSWIM6Q9HCJ5 1215 aa15.32■□□□□ 0.04
TOP3A-205ENST00000477508 GPCPD1Q9NPB8 672 aa15.32■□□□□ 0.04
TOP3A-205ENST00000477508 PRR12Q9ULL5 1215 aa15.32■□□□□ 0.04
TOP3A-205ENST00000477508 SLC12A7Q9Y666 1083 aa15.32■□□□□ 0.04
TOP3A-205ENST00000477508 CYP46A1Q9Y6A2 500 aa15.32■□□□□ 0.04
TOP3A-205ENST00000477508 A0A0G2JMZ2 1700 aa15.31■□□□□ 0.04
TOP3A-205ENST00000477508 GNAQP50148 359 aa15.31■□□□□ 0.04
TOP3A-205ENST00000477508 PLS1Q14651 629 aa15.31■□□□□ 0.04
TOP3A-205ENST00000477508 RUFY3Q7L099 469 aa15.31■□□□□ 0.04
TOP3A-205ENST00000477508 RIOX2Q8IUF8 465 aa15.31■□□□□ 0.04
TOP3A-205ENST00000477508 ZNF654Q8IZM8 581 aa15.31■□□□□ 0.04
TOP3A-205ENST00000477508 REPS2Q8NFH8 660 aa15.31■□□□□ 0.04
TOP3A-205ENST00000477508 CHMP4CQ96CF2 233 aa15.31■□□□□ 0.04
TOP3A-205ENST00000477508 IL17RAQ96F46 866 aa15.31■□□□□ 0.04
TOP3A-205ENST00000477508 MOV10L1Q9BXT6 1211 aaKnown RBP15.31■□□□□ 0.04
TOP3A-205ENST00000477508 SRRDQ9UH36 339 aa15.31■□□□□ 0.04
TOP3A-205ENST00000477508 ZNF214Q9UL59 606 aaPredicted RBP15.31■□□□□ 0.04
TOP3A-205ENST00000477508 FRMPD2Q68DX3 1309 aaPredicted RBP15.31■□□□□ 0.04
TOP3A-205ENST00000477508 PALM3A6NDB9 673 aaPredicted RBP15.3■□□□□ 0.04
TOP3A-205ENST00000477508 MGAMO43451 1857 aa15.3■□□□□ 0.04
TOP3A-205ENST00000477508 STRNO43815 780 aa15.3■□□□□ 0.04
TOP3A-205ENST00000477508 SEC24BO95487 1268 aa15.3■□□□□ 0.04
TOP3A-205ENST00000477508 RCAN1P53805 252 aa15.3■□□□□ 0.04
TOP3A-205ENST00000477508 GRM4Q14833 912 aa15.3■□□□□ 0.04
TOP3A-205ENST00000477508 TTBK2Q6IQ55 1244 aa15.3■□□□□ 0.04
TOP3A-205ENST00000477508 FBXO46Q6PJ61 603 aaPredicted RBP15.3■□□□□ 0.04
TOP3A-205ENST00000477508 PLEKHH3Q7Z736 793 aa15.3■□□□□ 0.04
TOP3A-205ENST00000477508 CTCFLQ8NI51 663 aaPredicted RBP15.3■□□□□ 0.04
TOP3A-205ENST00000477508 SOCS4Q8WXH5 440 aa15.3■□□□□ 0.04
TOP3A-205ENST00000477508 LZTS2Q9BRK4 669 aa15.3■□□□□ 0.04
TOP3A-205ENST00000477508 LRRC2Q9BYS8 371 aa15.3■□□□□ 0.04
TOP3A-205ENST00000477508 ARHGAP39Q9C0H5 1083 aa15.3■□□□□ 0.04
TOP3A-205ENST00000477508 PORCNQ9H237 461 aa15.3■□□□□ 0.04
TOP3A-205ENST00000477508 IVNS1ABPQ9Y6Y0 642 aa15.3■□□□□ 0.04
TOP3A-205ENST00000477508 KLRF2D3W0D1 207 aa15.29■□□□□ 0.04
TOP3A-205ENST00000477508 SMARCA1P28370 1054 aa15.29■□□□□ 0.04
TOP3A-205ENST00000477508 SLC16A2P36021 539 aa15.29■□□□□ 0.04
TOP3A-205ENST00000477508 PPP2R5BQ15173 497 aa15.29■□□□□ 0.04
TOP3A-205ENST00000477508 TKFCQ3LXA3 575 aa15.29■□□□□ 0.04
TOP3A-205ENST00000477508 RASGRP2Q7LDG7 609 aa15.29■□□□□ 0.04
TOP3A-205ENST00000477508 GPR142Q7Z601 462 aa15.29■□□□□ 0.04
TOP3A-205ENST00000477508 CPXCR1Q8N123 301 aa15.29■□□□□ 0.04
TOP3A-205ENST00000477508 NUP133Q8WUM0 1156 aa15.29■□□□□ 0.04
TOP3A-205ENST00000477508 AGXT2Q9BYV1 514 aa15.29■□□□□ 0.04
TOP3A-205ENST00000477508 RANBP17Q9H2T7 1088 aaKnown RBP15.29■□□□□ 0.04
TOP3A-205ENST00000477508 SENP2Q9HC62 589 aa15.29■□□□□ 0.04
TOP3A-205ENST00000477508 GPHNQ9NQX3 736 aaPredicted RBP15.29■□□□□ 0.04
TOP3A-205ENST00000477508 FBXO40Q9UH90 709 aa15.29■□□□□ 0.04
TOP3A-205ENST00000477508 MAD2L2Q9UI95 211 aa15.29■□□□□ 0.04
TOP3A-205ENST00000477508 PTPN22Q9Y2R2 807 aa15.29■□□□□ 0.04
TOP3A-205ENST00000477508 GOLGA8HP0CJ92 632 aa15.28■□□□□ 0.04
TOP3A-205ENST00000477508 ERCC3P19447 782 aa15.28■□□□□ 0.04
TOP3A-205ENST00000477508 CTGFP29279 349 aa15.28■□□□□ 0.04
TOP3A-205ENST00000477508 TRAF1Q13077 416 aa15.28■□□□□ 0.04
TOP3A-205ENST00000477508 IRF5Q13568 498 aa15.28■□□□□ 0.04
TOP3A-205ENST00000477508 COL9A3Q14050 684 aaPredicted RBP15.28■□□□□ 0.04
TOP3A-205ENST00000477508 WDR78Q5VTH9 848 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms