RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 TCTN2Q96GX1 697 aa5.1□□□□□ -1.59
TARDBP-208ENST00000477447 DEPDC7Q96QD5 511 aa5.1□□□□□ -1.59
TARDBP-208ENST00000477447 SRPK1Q96SB4 655 aaKnown RBP5.1□□□□□ -1.59
TARDBP-208ENST00000477447 APBA2Q99767 749 aa5.1□□□□□ -1.59
TARDBP-208ENST00000477447 CARS2Q9HA77 564 aaKnown RBP5.1□□□□□ -1.59
TARDBP-208ENST00000477447 PAK6Q9NQU5 681 aaPredicted RBP5.1□□□□□ -1.59
TARDBP-208ENST00000477447 SNTG2Q9NY99 539 aa5.1□□□□□ -1.59
TARDBP-208ENST00000477447 CGGBP1Q9UFW8 167 aaPredicted RBP5.1□□□□□ -1.59
TARDBP-208ENST00000477447 PCDHA11Q9Y5I1 949 aa5.1□□□□□ -1.59
TARDBP-208ENST00000477447 SSU72P8A0A1W2PR75 194 aa5.09□□□□□ -1.59
TARDBP-208ENST00000477447 PDPK1O15530 556 aa5.09□□□□□ -1.59
TARDBP-208ENST00000477447 IGSF3O75054 1194 aa5.09□□□□□ -1.59
TARDBP-208ENST00000477447 FKTNO75072 461 aa5.09□□□□□ -1.59
TARDBP-208ENST00000477447 ADAMTS4O75173 837 aa5.09□□□□□ -1.59
TARDBP-208ENST00000477447 WNT11O96014 354 aa5.09□□□□□ -1.59
TARDBP-208ENST00000477447 ESR1P03372 595 aa5.09□□□□□ -1.59
TARDBP-208ENST00000477447 GSNP06396 782 aa5.09□□□□□ -1.59
TARDBP-208ENST00000477447 SYPP08247 313 aa5.09□□□□□ -1.59
TARDBP-208ENST00000477447 CTSKP43235 329 aa5.09□□□□□ -1.59
TARDBP-208ENST00000477447 PCBP3P57721 371 aaKnown RBP5.09□□□□□ -1.59
TARDBP-208ENST00000477447 ZP2Q05996 745 aa5.09□□□□□ -1.59
TARDBP-208ENST00000477447 RASA3Q14644 834 aa5.09□□□□□ -1.59
TARDBP-208ENST00000477447 SLC10A6Q3KNW5 377 aa5.09□□□□□ -1.59
TARDBP-208ENST00000477447 MTERF2Q49AM1 385 aa5.09□□□□□ -1.59
TARDBP-208ENST00000477447 ARTNQ5T4W7 220 aa5.09□□□□□ -1.59
TARDBP-208ENST00000477447 XP32Q5T750 250 aa5.09□□□□□ -1.59
TARDBP-208ENST00000477447 CWF19L1Q69YN2 538 aaKnown RBP5.09□□□□□ -1.59
TARDBP-208ENST00000477447 DPH6Q7L8W6 267 aa5.09□□□□□ -1.59
TARDBP-208ENST00000477447 LGR4Q9BXB1 951 aa5.09□□□□□ -1.59
TARDBP-208ENST00000477447 FOXP3Q9BZS1 431 aa5.09□□□□□ -1.59
TARDBP-208ENST00000477447 ZSWIM4Q9H7M6 989 aa5.09□□□□□ -1.59
TARDBP-208ENST00000477447 LRP2BPQ9P2M1 347 aa5.09□□□□□ -1.59
TARDBP-208ENST00000477447 SF3B6Q9Y3B4 125 aaKnown RBP5.09□□□□□ -1.59
TARDBP-208ENST00000477447 MSRB2Q9Y3D2 182 aa5.09□□□□□ -1.59
TARDBP-208ENST00000477447 FAM221BA6H8Z2 402 aa5.08□□□□□ -1.6
TARDBP-208ENST00000477447 AGRPO00253 132 aa5.08□□□□□ -1.6
TARDBP-208ENST00000477447 NOP56O00567 594 aaKnown RBP5.08□□□□□ -1.6
TARDBP-208ENST00000477447 CD3EP07766 207 aa5.08□□□□□ -1.6
TARDBP-208ENST00000477447 IFRD2Q12894 506 aaPredicted RBP5.08□□□□□ -1.6
TARDBP-208ENST00000477447 RASGRF1Q13972 1273 aa5.08□□□□□ -1.6
TARDBP-208ENST00000477447 PLCL1Q15111 1095 aa5.08□□□□□ -1.6
TARDBP-208ENST00000477447 CCDC144BQ3MJ40 725 aa5.08□□□□□ -1.6
TARDBP-208ENST00000477447 RNF111Q6ZNA4 994 aa5.08□□□□□ -1.6
TARDBP-208ENST00000477447 ZNF227Q86WZ6 799 aa5.08□□□□□ -1.6
TARDBP-208ENST00000477447 CRACR2BQ8N4Y2 399 aaPredicted RBP5.08□□□□□ -1.6
TARDBP-208ENST00000477447 LRRN4CLQ8ND94 238 aa5.08□□□□□ -1.6
TARDBP-208ENST00000477447 BVESQ8NE79 360 aa5.08□□□□□ -1.6
TARDBP-208ENST00000477447 CCDC113Q9H0I3 377 aa5.08□□□□□ -1.6
TARDBP-208ENST00000477447 EPN3Q9H201 632 aa5.08□□□□□ -1.6
TARDBP-208ENST00000477447 ZFP64Q9NPA5 681 aa5.08□□□□□ -1.6
TARDBP-208ENST00000477447 PRDM7Q9NQW5 492 aa5.08□□□□□ -1.6
TARDBP-208ENST00000477447 PFDN2Q9UHV9 154 aa5.08□□□□□ -1.6
TARDBP-208ENST00000477447 TCFL5Q9UL49 500 aa5.08□□□□□ -1.6
TARDBP-208ENST00000477447 AKT3Q9Y243 479 aa5.08□□□□□ -1.6
TARDBP-208ENST00000477447 A0A087WZG4 1122 aa5.07□□□□□ -1.6
TARDBP-208ENST00000477447 KCNH1O95259 989 aa5.07□□□□□ -1.6
TARDBP-208ENST00000477447 FUT4P22083 530 aa5.07□□□□□ -1.6
TARDBP-208ENST00000477447 BMP8BP34820 402 aa5.07□□□□□ -1.6
TARDBP-208ENST00000477447 TEKQ02763 1124 aa5.07□□□□□ -1.6
TARDBP-208ENST00000477447 NFE2L2Q16236 605 aa5.07□□□□□ -1.6
TARDBP-208ENST00000477447 DPY19L1Q2PZI1 675 aa5.07□□□□□ -1.6
TARDBP-208ENST00000477447 ARHGEF39Q8N4T4 335 aa5.07□□□□□ -1.6
TARDBP-208ENST00000477447 USHBP1Q8N6Y0 703 aa5.07□□□□□ -1.6
TARDBP-208ENST00000477447 ZNF513Q8N8E2 541 aaPredicted RBP5.07□□□□□ -1.6
TARDBP-208ENST00000477447 AGBL5Q8NDL9 886 aa5.07□□□□□ -1.6
TARDBP-208ENST00000477447 ST13P5Q8NFI4 369 aaPredicted RBP5.07□□□□□ -1.6
TARDBP-208ENST00000477447 SLAMF8Q9P0V8 285 aa5.07□□□□□ -1.6
TARDBP-208ENST00000477447 CDK11AQ9UQ88 783 aaPredicted RBP5.07□□□□□ -1.6
TARDBP-208ENST00000477447 DIS3Q9Y2L1 958 aaKnown RBP5.07□□□□□ -1.6
TARDBP-208ENST00000477447 EMC9Q9Y3B6 208 aa5.07□□□□□ -1.6
TARDBP-208ENST00000477447 STXBP3O00186 592 aa5.06□□□□□ -1.6
TARDBP-208ENST00000477447 TBX1O43435 398 aa5.06□□□□□ -1.6
TARDBP-208ENST00000477447 ZNF205O95201 554 aa5.06□□□□□ -1.6
TARDBP-208ENST00000477447 ITGAVP06756 1048 aa5.06□□□□□ -1.6
TARDBP-208ENST00000477447 RPL10P27635 214 aaKnown RBP5.06□□□□□ -1.6
TARDBP-208ENST00000477447 AMPD2Q01433 879 aa5.06□□□□□ -1.6
TARDBP-208ENST00000477447 POU4F1Q01851 419 aa5.06□□□□□ -1.6
TARDBP-208ENST00000477447 GRB10Q13322 594 aa5.06□□□□□ -1.6
TARDBP-208ENST00000477447 POMZP3Q6PJE2 187 aa5.06□□□□□ -1.6
TARDBP-208ENST00000477447 SPATC1Q76KD6 591 aa5.06□□□□□ -1.6
TARDBP-208ENST00000477447 WAPLQ7Z5K2 1190 aa5.06□□□□□ -1.6
TARDBP-208ENST00000477447 LINC00116Q8NCU8 138 aa5.06□□□□□ -1.6
TARDBP-208ENST00000477447 PI4K2BQ8TCG2 481 aa5.06□□□□□ -1.6
TARDBP-208ENST00000477447 BTN2A2Q8WVV5 523 aa5.06□□□□□ -1.6
TARDBP-208ENST00000477447 MKL1Q969V6 931 aa5.06□□□□□ -1.6
TARDBP-208ENST00000477447 MRFAP1L1Q96HT8 127 aa5.06□□□□□ -1.6
TARDBP-208ENST00000477447 RCC1LQ96I51 464 aaKnown RBP5.06□□□□□ -1.6
TARDBP-208ENST00000477447 CDADC1Q9BWV3 514 aa5.06□□□□□ -1.6
TARDBP-208ENST00000477447 PIF1Q9H611 641 aa5.06□□□□□ -1.6
TARDBP-208ENST00000477447 LMCD1Q9NZU5 365 aa5.06□□□□□ -1.6
TARDBP-208ENST00000477447 GPR55Q9Y2T6 319 aaPredicted RBP5.06□□□□□ -1.6
TARDBP-208ENST00000477447 IQCA1LA6NCM1 817 aa5.05□□□□□ -1.6
TARDBP-208ENST00000477447 VAMP4O75379 141 aa5.05□□□□□ -1.6
TARDBP-208ENST00000477447 GSTM1P09488 218 aa5.05□□□□□ -1.6
TARDBP-208ENST00000477447 IFNGR1P15260 489 aa5.05□□□□□ -1.6
TARDBP-208ENST00000477447 VAV1P15498 845 aa5.05□□□□□ -1.6
TARDBP-208ENST00000477447 GP2P55259 537 aaKnown RBP5.05□□□□□ -1.6
TARDBP-208ENST00000477447 SSRP1Q08945 709 aaKnown RBP5.05□□□□□ -1.6
TARDBP-208ENST00000477447 SLC23A3Q6PIS1 610 aa5.05□□□□□ -1.6
TARDBP-208ENST00000477447 ZPBP2Q6X784 338 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms