RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 CPSF2Q9P2I0 782 aaKnown RBP20.45■□□□□ 0.86
VARS2-209ENST00000477288 PHLDB2Q86SQ0 1253 aa20.45■□□□□ 0.86
VARS2-209ENST00000477288 KSR1Q8IVT5 923 aa20.45■□□□□ 0.86
VARS2-209ENST00000477288 ADPGKQ9BRR6 497 aa20.45■□□□□ 0.86
VARS2-209ENST00000477288 E7EWF7 191 aa20.44■□□□□ 0.86
VARS2-209ENST00000477288 IFNB1P01574 187 aa20.44■□□□□ 0.86
VARS2-209ENST00000477288 PABPC4Q13310 644 aaKnown RBP eCLIP20.44■□□□□ 0.861e-8■■■■□ 22.7
VARS2-209ENST00000477288 SULF1Q8IWU6 871 aa20.44■□□□□ 0.86
VARS2-209ENST00000477288 AOX1Q06278 1338 aa20.44■□□□□ 0.86
VARS2-209ENST00000477288 ATF7P17544 494 aaPredicted RBP20.44■□□□□ 0.86
VARS2-209ENST00000477288 SCYL1Q96KG9 808 aa20.44■□□□□ 0.86
VARS2-209ENST00000477288 NBPF3Q9H094 633 aa20.44■□□□□ 0.86
VARS2-209ENST00000477288 PNMA6EA0A0J9YXQ4 647 aa20.44■□□□□ 0.86
VARS2-209ENST00000477288 STAM2O75886 525 aa20.44■□□□□ 0.86
VARS2-209ENST00000477288 PTPROQ16827 1216 aa20.44■□□□□ 0.86
VARS2-209ENST00000477288 CAPN12Q6ZSI9 719 aa20.44■□□□□ 0.86
VARS2-209ENST00000477288 CROCCP2Q86T23 111 aa20.44■□□□□ 0.86
VARS2-209ENST00000477288 LRRC43Q8N309 656 aa20.44■□□□□ 0.86
VARS2-209ENST00000477288 ZNF496Q96IT1 587 aaPredicted RBP20.44■□□□□ 0.86
VARS2-209ENST00000477288 MRPL11Q9Y3B7 192 aaKnown RBP20.44■□□□□ 0.86
VARS2-209ENST00000477288 PBRM1Q86U86 1689 aa20.44■□□□□ 0.86
VARS2-209ENST00000477288 CEP170Q5SW79 1584 aa20.44■□□□□ 0.86
VARS2-209ENST00000477288 K7ENM7 598 aa20.44■□□□□ 0.86
VARS2-209ENST00000477288 ATXN8OSP0DMR3 200 aa20.44■□□□□ 0.86
VARS2-209ENST00000477288 TECP42680 631 aa20.44■□□□□ 0.86
VARS2-209ENST00000477288 ZNF526Q8TF50 670 aaPredicted RBP20.44■□□□□ 0.86
VARS2-209ENST00000477288 SGSM2O43147 1006 aa20.44■□□□□ 0.86
VARS2-209ENST00000477288 GYG1P46976 350 aa20.44■□□□□ 0.86
VARS2-209ENST00000477288 ZNF75DP51815 510 aa20.44■□□□□ 0.86
VARS2-209ENST00000477288 TSTA3Q13630 321 aaPredicted RBP20.44■□□□□ 0.86
VARS2-209ENST00000477288 CERKLQ49MI3 558 aaPredicted RBP20.44■□□□□ 0.86
VARS2-209ENST00000477288 GDAP1L1Q96MZ0 367 aa20.44■□□□□ 0.86
VARS2-209ENST00000477288 IWS1Q96ST2 819 aa20.44■□□□□ 0.86
VARS2-209ENST00000477288 RAB20Q9NX57 234 aa20.44■□□□□ 0.86
VARS2-209ENST00000477288 SAT1P21673 171 aa20.43■□□□□ 0.86
VARS2-209ENST00000477288 HS1BP3Q53T59 392 aa20.43■□□□□ 0.86
VARS2-209ENST00000477288 C17orf53Q8N3J3 647 aaPredicted RBP20.43■□□□□ 0.86
VARS2-209ENST00000477288 THRAP3Q9Y2W1 955 aaKnown RBP20.43■□□□□ 0.86
VARS2-209ENST00000477288 KRT71Q3SY84 523 aa20.43■□□□□ 0.86
VARS2-209ENST00000477288 JAK2O60674 1132 aa20.43■□□□□ 0.86
VARS2-209ENST00000477288 GUCY2FP51841 1108 aa20.43■□□□□ 0.86
VARS2-209ENST00000477288 MTMR3Q13615 1198 aa20.43■□□□□ 0.86
VARS2-209ENST00000477288 TAB3Q8N5C8 712 aaPredicted RBP20.43■□□□□ 0.86
VARS2-209ENST00000477288 MAIP1Q8WWC4 291 aa20.43■□□□□ 0.86
VARS2-209ENST00000477288 ARHGAP42A6NI28 874 aa20.43■□□□□ 0.86
VARS2-209ENST00000477288 PNOCQ13519 176 aa20.43■□□□□ 0.86
VARS2-209ENST00000477288 POTEDQ86YR6 584 aa20.43■□□□□ 0.86
VARS2-209ENST00000477288 PPP4R1Q8TF05 950 aa20.43■□□□□ 0.86
VARS2-209ENST00000477288 SERTAD1Q9UHV2 236 aa20.43■□□□□ 0.86
VARS2-209ENST00000477288 ARHGEF10O15013 1369 aa20.43■□□□□ 0.86
VARS2-209ENST00000477288 ESYT2A0FGR8 921 aa20.43■□□□□ 0.86
VARS2-209ENST00000477288 CDC37L1Q7L3B6 337 aa20.43■□□□□ 0.86
VARS2-209ENST00000477288 ZNF654Q8IZM8 581 aa20.43■□□□□ 0.86
VARS2-209ENST00000477288 SEC24BO95487 1268 aa20.42■□□□□ 0.86
VARS2-209ENST00000477288 GNA14O95837 355 aa20.42■□□□□ 0.86
VARS2-209ENST00000477288 STX2P32856 288 aa20.42■□□□□ 0.86
VARS2-209ENST00000477288 SKA2Q8WVK7 121 aaPredicted RBP20.42■□□□□ 0.86
VARS2-209ENST00000477288 ZSCAN10Q96SZ4 725 aaPredicted RBP20.42■□□□□ 0.86
VARS2-209ENST00000477288 AMFRQ9UKV5 643 aa20.42■□□□□ 0.86
VARS2-209ENST00000477288 IFIH1Q9BYX4 1025 aaKnown RBP20.42■□□□□ 0.86
VARS2-209ENST00000477288 ATP2B4P23634 1241 aa20.42■□□□□ 0.86
VARS2-209ENST00000477288 SAMD9Q5K651 1589 aa20.42■□□□□ 0.86
VARS2-209ENST00000477288 KIF11P52732 1056 aa20.42■□□□□ 0.86
VARS2-209ENST00000477288 RNF10Q8N5U6 811 aaKnown RBP20.42■□□□□ 0.86
VARS2-209ENST00000477288 KDRP35968 1356 aa20.41■□□□□ 0.86
VARS2-209ENST00000477288 XRCC5P13010 732 aaKnown RBP20.41■□□□□ 0.86
VARS2-209ENST00000477288 GSTA1P08263 222 aa20.41■□□□□ 0.86
VARS2-209ENST00000477288 GSTA2P09210 222 aa20.41■□□□□ 0.86
VARS2-209ENST00000477288 SLAIN2Q9P270 581 aa20.41■□□□□ 0.86
VARS2-209ENST00000477288 TSKSQ9UJT2 592 aa20.41■□□□□ 0.86
VARS2-209ENST00000477288 NOC2LQ9Y3T9 749 aaKnown RBP20.41■□□□□ 0.86
VARS2-209ENST00000477288 GOLGA8HP0CJ92 632 aa20.41■□□□□ 0.86
VARS2-209ENST00000477288 SYNJ2BP-COX16A0A087WUM0 186 aa20.41■□□□□ 0.86
VARS2-209ENST00000477288 MUM1L1Q5H9M0 696 aa20.41■□□□□ 0.86
VARS2-209ENST00000477288 CCDC84Q86UT8 332 aaPredicted RBP20.41■□□□□ 0.86
VARS2-209ENST00000477288 SDR42E1Q8WUS8 393 aa20.41■□□□□ 0.86
VARS2-209ENST00000477288 APOL6Q9BWW8 343 aa20.41■□□□□ 0.86
VARS2-209ENST00000477288 COX16Q9P0S2 106 aa20.41■□□□□ 0.86
VARS2-209ENST00000477288 VPS41P49754 854 aa20.41■□□□□ 0.86
VARS2-209ENST00000477288 MCF2L2Q86YR7 1114 aa20.41■□□□□ 0.86
VARS2-209ENST00000477288 CCDC13Q8IYE1 715 aa20.41■□□□□ 0.86
VARS2-209ENST00000477288 P3H4Q92791 437 aa20.41■□□□□ 0.86
VARS2-209ENST00000477288 CHL1O00533 1208 aa20.4■□□□□ 0.86
VARS2-209ENST00000477288 BTDP43251 543 aa20.4■□□□□ 0.86
VARS2-209ENST00000477288 FBXO11Q86XK2 927 aa20.4■□□□□ 0.86
VARS2-209ENST00000477288 CCDC38Q502W7 563 aa20.4■□□□□ 0.86
VARS2-209ENST00000477288 NCAPGQ9BPX3 1015 aa20.4■□□□□ 0.86
VARS2-209ENST00000477288 TROVE2P10155 538 aaKnown RBP eCLIP20.4■□□□□ 0.86
VARS2-209ENST00000477288 TEKT3Q9BXF9 490 aa20.4■□□□□ 0.86
VARS2-209ENST00000477288 RAB17Q9H0T7 212 aa20.4■□□□□ 0.86
VARS2-209ENST00000477288 KDM2BQ8NHM5 1336 aa20.4■□□□□ 0.86
VARS2-209ENST00000477288 ICA1Q05084 483 aa20.4■□□□□ 0.86
VARS2-209ENST00000477288 TACO1Q9BSH4 297 aaKnown RBP20.4■□□□□ 0.86
VARS2-209ENST00000477288 RGS16O15492 202 aaPredicted RBP20.4■□□□□ 0.86
VARS2-209ENST00000477288 DLATP10515 647 aaKnown RBP20.4■□□□□ 0.86
VARS2-209ENST00000477288 STAT1P42224 750 aa20.4■□□□□ 0.86
VARS2-209ENST00000477288 PPP2R5AQ15172 486 aa20.4■□□□□ 0.86
VARS2-209ENST00000477288 MYOCDQ8IZQ8 938 aa20.4■□□□□ 0.86
VARS2-209ENST00000477288 BLIDQ8IZY5 108 aa20.4■□□□□ 0.86
VARS2-209ENST00000477288 FLAD1Q8NFF5 587 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms