RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 GSDMAQ96QA5 445 aa13.07□□□□□ -0.32
NUP188-205ENST00000477069 F8W031 263 aaPredicted RBP13.07□□□□□ -0.32
NUP188-205ENST00000477069 PDHBP11177 359 aa13.07□□□□□ -0.32
NUP188-205ENST00000477069 CASP1P29466 404 aa13.07□□□□□ -0.32
NUP188-205ENST00000477069 PICALMQ13492 652 aa13.07□□□□□ -0.32
NUP188-205ENST00000477069 CDC42EP5Q6NZY7 148 aa13.07□□□□□ -0.32
NUP188-205ENST00000477069 VSTM4Q8IW00 320 aa13.07□□□□□ -0.32
NUP188-205ENST00000477069 PYM1Q9BRP8 204 aaKnown RBP13.07□□□□□ -0.32
NUP188-205ENST00000477069 RIOX1Q9H6W3 641 aa13.07□□□□□ -0.32
NUP188-205ENST00000477069 ARFGEF1Q9Y6D6 1849 aa13.07□□□□□ -0.32
NUP188-205ENST00000477069 USP17L5A8MUK1 530 aa13.06□□□□□ -0.32
NUP188-205ENST00000477069 AKR1B1P15121 316 aa13.06□□□□□ -0.32
NUP188-205ENST00000477069 CD44P16070 742 aaKnown RBP13.06□□□□□ -0.32
NUP188-205ENST00000477069 AFMP43652 599 aa13.06□□□□□ -0.32
NUP188-205ENST00000477069 KCNJ6P48051 423 aa13.06□□□□□ -0.32
NUP188-205ENST00000477069 DHX8Q14562 1220 aaKnown RBP13.06□□□□□ -0.32
NUP188-205ENST00000477069 NYAP1Q6ZVC0 841 aa13.06□□□□□ -0.32
NUP188-205ENST00000477069 CCDC34Q96HJ3 373 aa13.06□□□□□ -0.32
NUP188-205ENST00000477069 TMEM60Q9H2L4 133 aa13.06□□□□□ -0.32
NUP188-205ENST00000477069 MTMR7Q9Y216 660 aa13.06□□□□□ -0.32
NUP188-205ENST00000477069 NFE2L3Q9Y4A8 694 aa13.06□□□□□ -0.32
NUP188-205ENST00000477069 CCDC194A0A1B0GVG4 234 aa13.06□□□□□ -0.32
NUP188-205ENST00000477069 TMEM232C9JQI7 657 aa13.06□□□□□ -0.32
NUP188-205ENST00000477069 SERPINC1P01008 464 aa13.06□□□□□ -0.32
NUP188-205ENST00000477069 SHMT1P34896 483 aa13.06□□□□□ -0.32
NUP188-205ENST00000477069 IQUBQ8NA54 791 aa13.06□□□□□ -0.32
NUP188-205ENST00000477069 USP40Q9NVE5 1235 aa13.06□□□□□ -0.32
NUP188-205ENST00000477069 SWAP70Q9UH65 585 aa13.06□□□□□ -0.32
NUP188-205ENST00000477069 INF2Q27J81 1249 aa13.06□□□□□ -0.32
NUP188-205ENST00000477069 TRMT44Q8IYL2 757 aaKnown RBP13.06□□□□□ -0.32
NUP188-205ENST00000477069 C16orf45Q96MC5 204 aaPredicted RBP13.06□□□□□ -0.32
NUP188-205ENST00000477069 ESYT2A0FGR8 921 aa13.05□□□□□ -0.32
NUP188-205ENST00000477069 PPP1R3GB7ZBB8 358 aa13.05□□□□□ -0.32
NUP188-205ENST00000477069 LAD1O00515 517 aa13.05□□□□□ -0.32
NUP188-205ENST00000477069 SCNN1DP51172 638 aa13.05□□□□□ -0.32
NUP188-205ENST00000477069 FKBP1AP62942 108 aaKnown RBP13.05□□□□□ -0.32
NUP188-205ENST00000477069 TBX2Q13207 712 aaPredicted RBP13.05□□□□□ -0.32
NUP188-205ENST00000477069 APTXQ7Z2E3 356 aaKnown RBP13.05□□□□□ -0.32
NUP188-205ENST00000477069 PODNQ7Z5L7 613 aa13.05□□□□□ -0.32
NUP188-205ENST00000477069 CCAR2Q8N163 923 aaKnown RBP13.05□□□□□ -0.32
NUP188-205ENST00000477069 RRP36Q96EU6 259 aaKnown RBP13.05□□□□□ -0.32
NUP188-205ENST00000477069 TMX1Q9H3N1 280 aa13.05□□□□□ -0.32
NUP188-205ENST00000477069 SERPINB13Q9UIV8 391 aa13.05□□□□□ -0.32
NUP188-205ENST00000477069 PRPHP41219 470 aa13.05□□□□□ -0.32
NUP188-205ENST00000477069 STYK1Q6J9G0 422 aa13.05□□□□□ -0.32
NUP188-205ENST00000477069 CCDC12Q8WUD4 166 aaPredicted RBP13.05□□□□□ -0.32
NUP188-205ENST00000477069 TEKT1Q969V4 418 aa13.05□□□□□ -0.32
NUP188-205ENST00000477069 PIGSQ96S52 555 aa13.05□□□□□ -0.32
NUP188-205ENST00000477069 KCNQ5Q9NR82 932 aa13.05□□□□□ -0.32
NUP188-205ENST00000477069 GTPBP6O43824 516 aaPredicted RBP13.04□□□□□ -0.32
NUP188-205ENST00000477069 NAPAP54920 295 aa13.04□□□□□ -0.32
NUP188-205ENST00000477069 CFAP100Q494V2 611 aa13.04□□□□□ -0.32
NUP188-205ENST00000477069 ASPRV1Q53RT3 343 aa13.04□□□□□ -0.32
NUP188-205ENST00000477069 NAALADL2Q58DX5 795 aa13.04□□□□□ -0.32
NUP188-205ENST00000477069 E4F1Q66K89 784 aaPredicted RBP13.04□□□□□ -0.32
NUP188-205ENST00000477069 MSL1Q68DK7 614 aa13.04□□□□□ -0.32
NUP188-205ENST00000477069 ZDHHC15Q96MV8 337 aa13.04□□□□□ -0.32
NUP188-205ENST00000477069 MRIQ9BWK5 157 aa13.04□□□□□ -0.32
NUP188-205ENST00000477069 EHD4Q9H223 541 aa13.04□□□□□ -0.32
NUP188-205ENST00000477069 hCG_1984214I3L0E3 225 aa13.04□□□□□ -0.32
NUP188-205ENST00000477069 SFPQP23246 707 aaKnown RBP eCLIP13.04□□□□□ -0.32
NUP188-205ENST00000477069 CRKP46108 304 aa13.04□□□□□ -0.32
NUP188-205ENST00000477069 KRT25Q7Z3Z0 450 aa13.04□□□□□ -0.32
NUP188-205ENST00000477069 ZNF713Q8N859 430 aaPredicted RBP13.04□□□□□ -0.32
NUP188-205ENST00000477069 DISC1Q9NRI5 854 aa13.04□□□□□ -0.32
NUP188-205ENST00000477069 SAMSN1Q9NSI8 373 aaKnown RBP13.04□□□□□ -0.32
NUP188-205ENST00000477069 SMCO2A6NFE2 343 aa13.03□□□□□ -0.32
NUP188-205ENST00000477069 TNNT1P13805 278 aa13.03□□□□□ -0.32
NUP188-205ENST00000477069 NFIAQ12857 509 aa13.03□□□□□ -0.32
NUP188-205ENST00000477069 TPD52L1Q16890 204 aaPredicted RBP13.03□□□□□ -0.32
NUP188-205ENST00000477069 CDKAL1Q5VV42 579 aa13.03□□□□□ -0.32
NUP188-205ENST00000477069 C2CD5Q86YS7 1000 aa13.03□□□□□ -0.32
NUP188-205ENST00000477069 DBNDD1Q9H9R9 158 aa13.03□□□□□ -0.32
NUP188-205ENST00000477069 C6orf50Q9HD87 102 aa13.03□□□□□ -0.32
NUP188-205ENST00000477069 SYNRGQ9UMZ2 1314 aa13.03□□□□□ -0.32
NUP188-205ENST00000477069 RIOK3O14730 519 aaKnown RBP13.03□□□□□ -0.32
NUP188-205ENST00000477069 GNA11P29992 359 aa13.03□□□□□ -0.32
NUP188-205ENST00000477069 DACT2Q5SW24 774 aa13.03□□□□□ -0.32
NUP188-205ENST00000477069 SPATA1Q5VX52 437 aa13.03□□□□□ -0.32
NUP188-205ENST00000477069 DTHD1Q6ZMT9 781 aa13.03□□□□□ -0.32
NUP188-205ENST00000477069 HOMER1Q86YM7 354 aa13.03□□□□□ -0.32
NUP188-205ENST00000477069 CLEC10AQ8IUN9 316 aa13.03□□□□□ -0.32
NUP188-205ENST00000477069 LRRC47Q8N1G4 583 aaKnown RBP13.03□□□□□ -0.32
NUP188-205ENST00000477069 STAMQ92783 540 aa13.03□□□□□ -0.32
NUP188-205ENST00000477069 CCSER1Q9C0I3 900 aa13.03□□□□□ -0.32
NUP188-205ENST00000477069 UBA5Q9GZZ9 404 aa13.03□□□□□ -0.32
NUP188-205ENST00000477069 DNAJC18Q9H819 358 aa13.03□□□□□ -0.32
NUP188-205ENST00000477069 SEC63Q9UGP8 760 aaKnown RBP13.03□□□□□ -0.32
NUP188-205ENST00000477069 FRMPD2Q68DX3 1309 aaPredicted RBP13.03□□□□□ -0.32
NUP188-205ENST00000477069 A0A1B0GTH6 734 aa13.02□□□□□ -0.32
NUP188-205ENST00000477069 TTLL1O95922 423 aa13.02□□□□□ -0.32
NUP188-205ENST00000477069 NR1I3Q14994 352 aa13.02□□□□□ -0.32
NUP188-205ENST00000477069 TMEM139Q8IV31 216 aa13.02□□□□□ -0.32
NUP188-205ENST00000477069 LRRC15Q8TF66 581 aa13.02□□□□□ -0.32
NUP188-205ENST00000477069 BLZF1Q9H2G9 400 aa13.02□□□□□ -0.32
NUP188-205ENST00000477069 CDC25AP30304 524 aa13.02□□□□□ -0.33
NUP188-205ENST00000477069 KARSQ15046 597 aaKnown RBP13.02□□□□□ -0.33
NUP188-205ENST00000477069 NONOQ15233 471 aaKnown RBP eCLIP13.02□□□□□ -0.33
NUP188-205ENST00000477069 STRIP1Q5VSL9 837 aa13.02□□□□□ -0.33
NUP188-205ENST00000477069 ZFPM1Q8IX07 1006 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms