RNA–Protein interactions for RNA: ENST00000476932.5

LIMS2-214, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-214ENST00000476932 PCDHA6Q9UN73 950 aa23.8■■□□□ 1.4
LIMS2-214ENST00000476932 RTCBQ9Y3I0 505 aaKnown RBP23.8■■□□□ 1.4
LIMS2-214ENST00000476932 PCDHA8Q9Y5H6 950 aa23.8■■□□□ 1.4
LIMS2-214ENST00000476932 FHOD1Q9Y613 1164 aa23.8■■□□□ 1.4
LIMS2-214ENST00000476932 SNED1Q8TER0 1413 aa23.8■■□□□ 1.4
LIMS2-214ENST00000476932 TOM1O60784 492 aa23.8■■□□□ 1.4
LIMS2-214ENST00000476932 NFIXQ14938 502 aa23.8■■□□□ 1.4
LIMS2-214ENST00000476932 NELFBQ8WX92 580 aa23.8■■□□□ 1.4
LIMS2-214ENST00000476932 TMEM60Q9H2L4 133 aa23.8■■□□□ 1.4
LIMS2-214ENST00000476932 DISC1Q9NRI5 854 aa23.8■■□□□ 1.4
LIMS2-214ENST00000476932 TCP11L1Q9NUJ3 509 aa23.8■■□□□ 1.4
LIMS2-214ENST00000476932 GDAQ9Y2T3 454 aa23.8■■□□□ 1.4
LIMS2-214ENST00000476932 THSD7AQ9UPZ6 1657 aa23.8■■□□□ 1.4
LIMS2-214ENST00000476932 PPP4CP60510 307 aa23.79■■□□□ 1.4
LIMS2-214ENST00000476932 STXBP3O00186 592 aa23.79■■□□□ 1.4
LIMS2-214ENST00000476932 ZRANB2O95218 330 aaKnown RBP eCLIP23.79■■□□□ 1.4
LIMS2-214ENST00000476932 ANKIB1Q9P2G1 1089 aa23.79■■□□□ 1.4
LIMS2-214ENST00000476932 CCNL1Q9UK58 526 aaPredicted RBP23.79■■□□□ 1.4
LIMS2-214ENST00000476932 PP2D1A8MPX8 630 aa23.78■■□□□ 1.4
LIMS2-214ENST00000476932 IGSF3O75054 1194 aa23.78■■□□□ 1.4
LIMS2-214ENST00000476932 STAT6P42226 847 aa23.78■■□□□ 1.4
LIMS2-214ENST00000476932 COPB1P53618 953 aaKnown RBP23.78■■□□□ 1.4
LIMS2-214ENST00000476932 GRAPQ13588 217 aa23.78■■□□□ 1.4
LIMS2-214ENST00000476932 RASGRP2Q7LDG7 609 aa23.78■■□□□ 1.4
LIMS2-214ENST00000476932 CNGA4Q8IV77 575 aa23.78■■□□□ 1.4
LIMS2-214ENST00000476932 GRAPLQ8TC17 118 aaPredicted RBP23.78■■□□□ 1.4
LIMS2-214ENST00000476932 PKNOX2Q96KN3 472 aa23.78■■□□□ 1.4
LIMS2-214ENST00000476932 RMND1Q9NWS8 449 aa23.78■■□□□ 1.4
LIMS2-214ENST00000476932 LEMD3Q9Y2U8 911 aa23.78■■□□□ 1.4
LIMS2-214ENST00000476932 RASA1P20936 1047 aa23.77■■□□□ 1.4
LIMS2-214ENST00000476932 PRCPP42785 496 aa23.77■■□□□ 1.4
LIMS2-214ENST00000476932 GNAQP50148 359 aa23.77■■□□□ 1.4
LIMS2-214ENST00000476932 PPP2R3AQ06190 1150 aa23.77■■□□□ 1.4
LIMS2-214ENST00000476932 TCP11X2Q5H9J9 407 aa23.77■■□□□ 1.4
LIMS2-214ENST00000476932 RSRC2Q7L4I2 434 aaKnown RBP23.77■■□□□ 1.4
LIMS2-214ENST00000476932 TGFBRAP1Q8WUH2 860 aa23.77■■□□□ 1.4
LIMS2-214ENST00000476932 CCDC51Q96ER9 411 aa23.77■■□□□ 1.4
LIMS2-214ENST00000476932 GPR101Q96P66 508 aaPredicted RBP23.77■■□□□ 1.4
LIMS2-214ENST00000476932 MKNK2Q9HBH9 465 aa23.77■■□□□ 1.4
LIMS2-214ENST00000476932 PALM3A6NDB9 673 aaPredicted RBP23.77■■□□□ 1.4
LIMS2-214ENST00000476932 RNF225M0QZC1 329 aaPredicted RBP23.77■■□□□ 1.4
LIMS2-214ENST00000476932 TSPY3P0CV98 308 aa23.77■■□□□ 1.4
LIMS2-214ENST00000476932 TSPY8P0CW00 308 aa23.77■■□□□ 1.4
LIMS2-214ENST00000476932 TXLNAP40222 546 aa23.77■■□□□ 1.4
LIMS2-214ENST00000476932 LRRC15Q8TF66 581 aa23.77■■□□□ 1.4
LIMS2-214ENST00000476932 TMEM47Q9BQJ4 181 aa23.77■■□□□ 1.4
LIMS2-214ENST00000476932 RTFDC1Q9BY42 306 aaPredicted RBP23.77■■□□□ 1.4
LIMS2-214ENST00000476932 BARHL2Q9NY43 387 aa23.77■■□□□ 1.4
LIMS2-214ENST00000476932 TAB2Q9NYJ8 693 aa23.77■■□□□ 1.4
LIMS2-214ENST00000476932 CCDC194A0A1B0GVG4 234 aa23.76■■□□□ 1.39
LIMS2-214ENST00000476932 N4BP3O15049 544 aa23.76■■□□□ 1.39
LIMS2-214ENST00000476932 SPAG1Q07617 926 aa23.76■■□□□ 1.39
LIMS2-214ENST00000476932 EPC1Q9H2F5 836 aa23.76■■□□□ 1.39
LIMS2-214ENST00000476932 LZTFL1Q9NQ48 299 aa23.76■■□□□ 1.39
LIMS2-214ENST00000476932 KCNJ18B7U540 433 aa23.76■■□□□ 1.39
LIMS2-214ENST00000476932 PNMA6AP0CW24 399 aaPredicted RBP23.76■■□□□ 1.39
LIMS2-214ENST00000476932 ERVK-24P63145 666 aa23.76■■□□□ 1.39
LIMS2-214ENST00000476932 GSTO1P78417 241 aa23.76■■□□□ 1.39
LIMS2-214ENST00000476932 KCNJ12Q14500 433 aa23.76■■□□□ 1.39
LIMS2-214ENST00000476932 INF2Q27J81 1249 aa23.76■■□□□ 1.39
LIMS2-214ENST00000476932 CCDC178Q5BJE1 867 aa23.76■■□□□ 1.39
LIMS2-214ENST00000476932 HEATR3Q7Z4Q2 680 aa23.76■■□□□ 1.39
LIMS2-214ENST00000476932 IRF2BP1Q8IU81 584 aa23.76■■□□□ 1.39
LIMS2-214ENST00000476932 VPS16Q9H269 839 aa23.76■■□□□ 1.39
LIMS2-214ENST00000476932 MAPK8IP1Q9UQF2 711 aa23.76■■□□□ 1.39
LIMS2-214ENST00000476932 BMS1Q14692 1282 aaKnown RBP23.75■■□□□ 1.39
LIMS2-214ENST00000476932 DTHD1Q6ZMT9 781 aa23.75■■□□□ 1.39
LIMS2-214ENST00000476932 CCDC148Q8NFR7 591 aa23.75■■□□□ 1.39
LIMS2-214ENST00000476932 CCDC12Q8WUD4 166 aaPredicted RBP23.75■■□□□ 1.39
LIMS2-214ENST00000476932 ST7Q9NRC1 585 aa23.75■■□□□ 1.39
LIMS2-214ENST00000476932 FOCADQ5VW36 1801 aa23.75■■□□□ 1.39
LIMS2-214ENST00000476932 KLRC4O43908 158 aa23.75■■□□□ 1.39
LIMS2-214ENST00000476932 BAG3O95817 575 aa23.75■■□□□ 1.39
LIMS2-214ENST00000476932 GALNT17Q6IS24 598 aa23.75■■□□□ 1.39
LIMS2-214ENST00000476932 C15orf52Q6ZUT6 534 aaKnown RBP23.75■■□□□ 1.39
LIMS2-214ENST00000476932 MAPKAPK5Q8IW41 473 aa23.75■■□□□ 1.39
LIMS2-214ENST00000476932 ADSSL1Q8N142 457 aa23.75■■□□□ 1.39
LIMS2-214ENST00000476932 ABHD10Q9NUJ1 306 aa23.75■■□□□ 1.39
LIMS2-214ENST00000476932 SAP30BPQ9UHR5 308 aaKnown RBP23.75■■□□□ 1.39
LIMS2-214ENST00000476932 ZHX1Q9UKY1 873 aaPredicted RBP23.75■■□□□ 1.39
LIMS2-214ENST00000476932 C8orf37Q96NL8 207 aa23.74■■□□□ 1.39
LIMS2-214ENST00000476932 TRIM49BA6NDI0 452 aa23.73■■□□□ 1.39
LIMS2-214ENST00000476932 ZNF444Q8N0Y2 327 aaPredicted RBP23.73■■□□□ 1.39
LIMS2-214ENST00000476932 CCSER1Q9C0I3 900 aa23.73■■□□□ 1.39
LIMS2-214ENST00000476932 STX8Q9UNK0 236 aa23.73■■□□□ 1.39
LIMS2-214ENST00000476932 TPM1P09493 284 aa23.73■■□□□ 1.39
LIMS2-214ENST00000476932 PMS1P54277 932 aaKnown RBP23.73■■□□□ 1.39
LIMS2-214ENST00000476932 FAM182BQ5T319 152 aa23.73■■□□□ 1.39
LIMS2-214ENST00000476932 ZNF804AQ7Z570 1209 aa23.73■■□□□ 1.39
LIMS2-214ENST00000476932 KBTBD4Q9NVX7 518 aa23.73■■□□□ 1.39
LIMS2-214ENST00000476932 ARGLU1Q9NWB6 273 aaPredicted RBP23.73■■□□□ 1.39
LIMS2-214ENST00000476932 MTMR7Q9Y216 660 aa23.73■■□□□ 1.39
LIMS2-214ENST00000476932 FLT1P17948 1338 aa23.73■■□□□ 1.39
LIMS2-214ENST00000476932 GOLGA8HP0CJ92 632 aa23.72■■□□□ 1.39
LIMS2-214ENST00000476932 KCNB1Q14721 858 aa23.72■■□□□ 1.39
LIMS2-214ENST00000476932 AMOTL1Q8IY63 956 aa23.72■■□□□ 1.39
LIMS2-214ENST00000476932 ACRBPQ8NEB7 543 aa23.72■■□□□ 1.39
LIMS2-214ENST00000476932 CPVLQ9H3G5 476 aa23.72■■□□□ 1.39
LIMS2-214ENST00000476932 GPR161Q8N6U8 529 aaKnown RBP23.72■■□□□ 1.39
LIMS2-214ENST00000476932 SPZ1Q9BXG8 430 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms